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The map label for this gene is recN [H]

Identifier: 38233772

GI number: 38233772

Start: 1179859

End: 1181598

Strand: Direct

Name: recN [H]

Synonym: DIP1182

Alternate gene names: 38233772

Gene position: 1179859-1181598 (Clockwise)

Preceding gene: 38233771

Following gene: 38233773

Centisome position: 47.41

GC content: 49.66

Gene sequence:

>1740_bases
ATGCTTTCAGATATCACCATTCACAACCTTGGAGTTATTCCGAGTGCGTCACTTGAGCTGAGTGAGGGTCTTACCGTTTT
GACCGGCGAAACAGGCGCCGGTAAAACGATGGTCGTTACAGGATTGAGACTGCTGGCAGGTGGCCGTGCCGAAGCTCAAC
GTGTTCGAAGTGGCAGTAGCCAAGCTGTTGTAGAAGGGCGATTTTTACTGGATTCTGTTGCCCCCGAATCGGCCGAAATG
GCGCGTGCGGTGGTATCCGCAGCAGGAGGTGCGCTAGATGAAAATGGTGAGGTTATAGTTTCCCGCACAGTGAGTGCACA
TGGGCGCTCTCGCGCGCACCTTGGAGGTCGCTCCGTTCCTGCGGCGAGCTTAGTGGAGTTTTCGAAAGAAGTCCTCACAA
TTCATGGTCAAAATGACCAGCTTCGGTTACTTAATAGCGATCGCCAGCGAGATGCACTCGATCGTTTTTCCCAAAAGATT
AGTGCTTTAATGACAGTTTATTCCGAAGCGTATAGAGCGTGGAAAAATCTCTCGAAGGATCTCCAGGAACGTCAAGCATC
GAAGCGGGAGCTTGCACAAGAAGTCGATCGCCTTGAGTTTGCTATTCGAGAGATTAGTGAGGTCGATCCGCAACCAGGTG
AAGAAGCGGATCTTCTTGTTCAAATCGCACGACTGCAAGACGTAGATGATCTTCGGGCGCAGGCTGTAGGAGCGCTTTCT
GTGATTGATGGTGCTGCAGGGGTTGAGGGATATGCTACGTGTGACTCTAGTGACGCCGATGCAGCTTCGGATCTTATTGG
TCAAGCACTATCAAGTGTCAGGGTAAGTAGTGATCCCACATTGCAAGGTGTTTCGCAACAGCTAGAAGCTGTTACATCAA
TCTTGATGGAAGTTTCTGCTCAATTAGGCGGTTTTTTGGATGAATTACCAGCGGATCCTCAAATGTTAGACAAATTGCTT
CAACGGCAGCAGGCACTTAAACAATTAACACGCAAGTATGCTTCTGACATCGATGGCGTTATCAAATGGAAGCTTAAAGC
TGAGCAAAAACTGGAGTCGATTGATGTTTCACCTGAAGCTCTTGATCAGCTCAAAAAAGAAACAGCTCTCGCAGAGCGAA
AAATGAATGATGCCGGTATGGCTTTGCGCGCAGCTCGTATCGAAGCTGCGCAGGAACTTAGTAATGCAGTCACGAAAGAG
CTGCACGGATTGGCTATGCCTAAGGCCATGTTTTCAGTGGTTGTACATCCAACGGAACCACAACCTTCTGGATTCGATGA
AGTCGAGTTTTGCTTAGCGCCAAATAACGCTACTGATCCTCGGCCATTGGCTTCGTCGGCATCAGGAGGCGAGCTGTCTC
GTGTCATGCTTGCTTTGGAAGTTATTCTTTCGGCAGGGCAACATGGAAATACGCTTGTGTTCGACGAGGTGGATGCAGGA
GTTGGTGGGCGCGCTGCAGTAGAAATCGGGCGTCGATTAGCTCGTCTTGCCCAAAATAACCAAGTCATTGTTGTTACGCA
TTTGCCACAAGTGGCTGCCTATGCAGATACCCATTTACATGTCGCGAAAGACGTTGGTGAATCAACAGTGACATCGGGTG
TAGAAAAATTGTCGGAACAACGTCGAGTTGAGGATCTCGCTCGTATGCTCGCGGGACTTGAGGACACTGATACTGGGCGG
GCACACGCCAAAGAGCTTTTTGAGAAGGCTCAAGCGGAAAACCGTGCGTTTCGCGTTTAG

Upstream 100 bases:

>100_bases
AGTTGGCGATTGGTGAAAAATGCTGTGGCAGAAAATTTGATATTCGAACACAATAGAACACCTGTTCCTTAATCGGATGA
TTTTGATGTACCATAGCTCT

Downstream 100 bases:

>100_bases
CGGTAGATTTCAATAAGCATTGTACAAATACTGTGGATGTCGAAATTTTATGAGGATTAAGGCTTTTCCTTCCGCGCGCC
TCTGTACACAATTCAATAAT

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MLSDITIHNLGVIPSASLELSEGLTVLTGETGAGKTMVVTGLRLLAGGRAEAQRVRSGSSQAVVEGRFLLDSVAPESAEM
ARAVVSAAGGALDENGEVIVSRTVSAHGRSRAHLGGRSVPAASLVEFSKEVLTIHGQNDQLRLLNSDRQRDALDRFSQKI
SALMTVYSEAYRAWKNLSKDLQERQASKRELAQEVDRLEFAIREISEVDPQPGEEADLLVQIARLQDVDDLRAQAVGALS
VIDGAAGVEGYATCDSSDADAASDLIGQALSSVRVSSDPTLQGVSQQLEAVTSILMEVSAQLGGFLDELPADPQMLDKLL
QRQQALKQLTRKYASDIDGVIKWKLKAEQKLESIDVSPEALDQLKKETALAERKMNDAGMALRAARIEAAQELSNAVTKE
LHGLAMPKAMFSVVVHPTEPQPSGFDEVEFCLAPNNATDPRPLASSASGGELSRVMLALEVILSAGQHGNTLVFDEVDAG
VGGRAAVEIGRRLARLAQNNQVIVVTHLPQVAAYADTHLHVAKDVGESTVTSGVEKLSEQRRVEDLARMLAGLEDTDTGR
AHAKELFEKAQAENRAFRV

Sequences:

>Translated_579_residues
MLSDITIHNLGVIPSASLELSEGLTVLTGETGAGKTMVVTGLRLLAGGRAEAQRVRSGSSQAVVEGRFLLDSVAPESAEM
ARAVVSAAGGALDENGEVIVSRTVSAHGRSRAHLGGRSVPAASLVEFSKEVLTIHGQNDQLRLLNSDRQRDALDRFSQKI
SALMTVYSEAYRAWKNLSKDLQERQASKRELAQEVDRLEFAIREISEVDPQPGEEADLLVQIARLQDVDDLRAQAVGALS
VIDGAAGVEGYATCDSSDADAASDLIGQALSSVRVSSDPTLQGVSQQLEAVTSILMEVSAQLGGFLDELPADPQMLDKLL
QRQQALKQLTRKYASDIDGVIKWKLKAEQKLESIDVSPEALDQLKKETALAERKMNDAGMALRAARIEAAQELSNAVTKE
LHGLAMPKAMFSVVVHPTEPQPSGFDEVEFCLAPNNATDPRPLASSASGGELSRVMLALEVILSAGQHGNTLVFDEVDAG
VGGRAAVEIGRRLARLAQNNQVIVVTHLPQVAAYADTHLHVAKDVGESTVTSGVEKLSEQRRVEDLARMLAGLEDTDTGR
AHAKELFEKAQAENRAFRV
>Mature_579_residues
MLSDITIHNLGVIPSASLELSEGLTVLTGETGAGKTMVVTGLRLLAGGRAEAQRVRSGSSQAVVEGRFLLDSVAPESAEM
ARAVVSAAGGALDENGEVIVSRTVSAHGRSRAHLGGRSVPAASLVEFSKEVLTIHGQNDQLRLLNSDRQRDALDRFSQKI
SALMTVYSEAYRAWKNLSKDLQERQASKRELAQEVDRLEFAIREISEVDPQPGEEADLLVQIARLQDVDDLRAQAVGALS
VIDGAAGVEGYATCDSSDADAASDLIGQALSSVRVSSDPTLQGVSQQLEAVTSILMEVSAQLGGFLDELPADPQMLDKLL
QRQQALKQLTRKYASDIDGVIKWKLKAEQKLESIDVSPEALDQLKKETALAERKMNDAGMALRAARIEAAQELSNAVTKE
LHGLAMPKAMFSVVVHPTEPQPSGFDEVEFCLAPNNATDPRPLASSASGGELSRVMLALEVILSAGQHGNTLVFDEVDAG
VGGRAAVEIGRRLARLAQNNQVIVVTHLPQVAAYADTHLHVAKDVGESTVTSGVEKLSEQRRVEDLARMLAGLEDTDTGR
AHAKELFEKAQAENRAFRV

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=577, Percent_Identity=32.0623916811092, Blast_Score=270, Evalue=2e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62007; Mature: 62007

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00064 L_LDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDITIHNLGVIPSASLELSEGLTVLTGETGAGKTMVVTGLRLLAGGRAEAQRVRSGSS
CCCCEEEECCCCCCCCCCCHHCCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCC
QAVVEGRFLLDSVAPESAEMARAVVSAAGGALDENGEVIVSRTVSAHGRSRAHLGGRSVP
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCHHCCCCCCCC
AASLVEFSKEVLTIHGQNDQLRLLNSDRQRDALDRFSQKISALMTVYSEAYRAWKNLSKD
HHHHHHHHHHHEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQERQASKRELAQEVDRLEFAIREISEVDPQPGEEADLLVQIARLQDVDDLRAQAVGALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
VIDGAAGVEGYATCDSSDADAASDLIGQALSSVRVSSDPTLQGVSQQLEAVTSILMEVSA
HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QLGGFLDELPADPQMLDKLLQRQQALKQLTRKYASDIDGVIKWKLKAEQKLESIDVSPEA
HHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHCCCCHHH
LDQLKKETALAERKMNDAGMALRAARIEAAQELSNAVTKELHGLAMPKAMFSVVVHPTEP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
QPSGFDEVEFCLAPNNATDPRPLASSASGGELSRVMLALEVILSAGQHGNTLVFDEVDAG
CCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
VGGRAAVEIGRRLARLAQNNQVIVVTHLPQVAAYADTHLHVAKDVGESTVTSGVEKLSEQ
CCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RRVEDLARMLAGLEDTDTGRAHAKELFEKAQAENRAFRV
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSDITIHNLGVIPSASLELSEGLTVLTGETGAGKTMVVTGLRLLAGGRAEAQRVRSGSS
CCCCEEEECCCCCCCCCCCHHCCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCC
QAVVEGRFLLDSVAPESAEMARAVVSAAGGALDENGEVIVSRTVSAHGRSRAHLGGRSVP
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCHHCCCCCCCC
AASLVEFSKEVLTIHGQNDQLRLLNSDRQRDALDRFSQKISALMTVYSEAYRAWKNLSKD
HHHHHHHHHHHEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQERQASKRELAQEVDRLEFAIREISEVDPQPGEEADLLVQIARLQDVDDLRAQAVGALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
VIDGAAGVEGYATCDSSDADAASDLIGQALSSVRVSSDPTLQGVSQQLEAVTSILMEVSA
HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QLGGFLDELPADPQMLDKLLQRQQALKQLTRKYASDIDGVIKWKLKAEQKLESIDVSPEA
HHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHCCCCHHH
LDQLKKETALAERKMNDAGMALRAARIEAAQELSNAVTKELHGLAMPKAMFSVVVHPTEP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
QPSGFDEVEFCLAPNNATDPRPLASSASGGELSRVMLALEVILSAGQHGNTLVFDEVDAG
CCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
VGGRAAVEIGRRLARLAQNNQVIVVTHLPQVAAYADTHLHVAKDVGESTVTSGVEKLSEQ
CCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RRVEDLARMLAGLEDTDTGRAHAKELFEKAQAENRAFRV
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]