| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is argB
Identifier: 38233759
GI number: 38233759
Start: 1161595
End: 1162527
Strand: Direct
Name: argB
Synonym: DIP1169
Alternate gene names: 38233759
Gene position: 1161595-1162527 (Clockwise)
Preceding gene: 38233758
Following gene: 38233760
Centisome position: 46.68
GC content: 50.48
Gene sequence:
>933_bases ATGACAGCCACTATCGATAATTTGACCTCCCGAGAGCGTGCAACCGTACTGGCCGATGCATTGCCATGGTTGCAGCGTTA TCGCGACAAAATTGTCGTCGTTAAATATGGTGGCAATGCCATGGTCGACGAAGAACTCAAAGCTGCTTTCGCGGCAGATA TGGTTTTTCTTCGCACAGTAGGCGTTCGTCCGGTTGTTGTGCACGGTGGTGGCCCTCAAATTTCACAAATGCTGCAACGC CTCGGCATCGAGGGTGAGTTTAAAGGGGGATTCCGCGTTACCTCGCCGGAGGTGCTTGAAATCGTTCGGATGGTTCTCTT TGGTCAAGTAGGTCGTGACCTAGTTGGACTGATTAACTCACACGGCCCTTATGCAGTGGGTACCTCTGGCGAGGATGCTG GCCTTTTCAGAGCCGAGAAACGACTTGTCGAAATCGATGGAGAGCTAACCGATATTGGCCAAGTTGGCAATATTACTGCA GTCAACGCTTCAAGCTTGATGGGCATCATTGATGCTGGTCGAATTCCGGTAGTCTCGACCATCGCTCCAGGCGATGATGG ATCGGTATATAACATCAACGCTGATACGGCTGCAGGGGCGTTGGCTGCTGCGTTGTCTGCCGAACGCCTATTGATTCTCA CTAATGTTGAGGGTCTTTATACCGACTGGCCGAATAAAGACTCGCTGGTATCCGTGATTGGTGCTGAGAGGTTGCGTGAA AAGCTTTCAGCGTTGGGTTCGGGAATGATTCCTAAAATGGAAAGCTGTGTAGATGCGGTCATCCATGGTGTTTCGGCAGC TCACGTAATTGATGGACGAGTCGCGCATTCAGTGCTTCTTGAGTTACTGACTTCGGGCGGTGTTGGGACCATGGTTGTTC CCGATACAGAAATGACAAATGGGACAGTGTACCGAAAGGATAATCATGTCTAA
Upstream 100 bases:
>100_bases TTTTGTTCGAACGACCGATTTATCACATCAATACGTTGAAATTAACTCAGCGTATTCCTCGTAACTCAAACATTTCAGAC AAGAAAGCCGGTGTGGGGCT
Downstream 100 bases:
>100_bases GAATGCGGCGAACACAGATTCACAATCGTCAGAGACTCAATGGGCTGATGTCATTATGAATACCTACGGCACGCCTCCTC TGACGATCACAGGAGGAAAT
Product: acetylglutamate kinase
Products: NA
Alternate protein names: N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; AGK
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MTATIDNLTSRERATVLADALPWLQRYRDKIVVVKYGGNAMVDEELKAAFAADMVFLRTVGVRPVVVHGGGPQISQMLQR LGIEGEFKGGFRVTSPEVLEIVRMVLFGQVGRDLVGLINSHGPYAVGTSGEDAGLFRAEKRLVEIDGELTDIGQVGNITA VNASSLMGIIDAGRIPVVSTIAPGDDGSVYNINADTAAGALAAALSAERLLILTNVEGLYTDWPNKDSLVSVIGAERLRE KLSALGSGMIPKMESCVDAVIHGVSAAHVIDGRVAHSVLLELLTSGGVGTMVVPDTEMTNGTVYRKDNHV
Sequences:
>Translated_310_residues MTATIDNLTSRERATVLADALPWLQRYRDKIVVVKYGGNAMVDEELKAAFAADMVFLRTVGVRPVVVHGGGPQISQMLQR LGIEGEFKGGFRVTSPEVLEIVRMVLFGQVGRDLVGLINSHGPYAVGTSGEDAGLFRAEKRLVEIDGELTDIGQVGNITA VNASSLMGIIDAGRIPVVSTIAPGDDGSVYNINADTAAGALAAALSAERLLILTNVEGLYTDWPNKDSLVSVIGAERLRE KLSALGSGMIPKMESCVDAVIHGVSAAHVIDGRVAHSVLLELLTSGGVGTMVVPDTEMTNGTVYRKDNHV >Mature_309_residues TATIDNLTSRERATVLADALPWLQRYRDKIVVVKYGGNAMVDEELKAAFAADMVFLRTVGVRPVVVHGGGPQISQMLQRL GIEGEFKGGFRVTSPEVLEIVRMVLFGQVGRDLVGLINSHGPYAVGTSGEDAGLFRAEKRLVEIDGELTDIGQVGNITAV NASSLMGIIDAGRIPVVSTIAPGDDGSVYNINADTAAGALAAALSAERLLILTNVEGLYTDWPNKDSLVSVIGAERLREK LSALGSGMIPKMESCVDAVIHGVSAAHVIDGRVAHSVLLELLTSGGVGTMVVPDTEMTNGTVYRKDNHV
Specific function: Arginine biosynthesis; first step. [C]
COG id: COG0548
COG function: function code E; Acetylglutamate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetylglutamate kinase family
Homologues:
Organism=Escherichia coli, GI1789181, Length=301, Percent_Identity=24.9169435215947, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI145693208, Length=234, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6320913, Length=271, Percent_Identity=26.9372693726937, Blast_Score=83, Evalue=6e-17,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ARGB_CORDI (Q6NHG8)
Other databases:
- EMBL: BX248357 - RefSeq: NP_939526.1 - ProteinModelPortal: Q6NHG8 - SMR: Q6NHG8 - GeneID: 2648569 - GenomeReviews: BX248353_GR - KEGG: cdi:DIP1169 - NMPDR: fig|257309.1.peg.1117 - HOGENOM: HBG497643 - OMA: DGEYEIN - ProtClustDB: PRK00942 - BioCyc: CDIP257309:DIP1169-MONOMER - BRENDA: 2.7.2.8 - GO: GO:0005737 - HAMAP: MF_00082_B - InterPro: IPR004662 - InterPro: IPR001048 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000728 - TIGRFAMs: TIGR00761
Pfam domain/function: PF00696 AA_kinase; SSF53633 Aa_kinase
EC number: =2.7.2.8
Molecular weight: Translated: 32790; Mature: 32659
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: BINDING 92-92 BINDING 191-191
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATIDNLTSRERATVLADALPWLQRYRDKIVVVKYGGNAMVDEELKAAFAADMVFLRTV CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHC GVRPVVVHGGGPQISQMLQRLGIEGEFKGGFRVTSPEVLEIVRMVLFGQVGRDLVGLINS CCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCC HGPYAVGTSGEDAGLFRAEKRLVEIDGELTDIGQVGNITAVNASSLMGIIDAGRIPVVST CCCEEECCCCCCCHHHHHHHHHEEECCCEECCCCCCCEEEECHHHHHHHHCCCCCCEEEE IAPGDDGSVYNINADTAAGALAAALSAERLLILTNVEGLYTDWPNKDSLVSVIGAERLRE ECCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHH KLSALGSGMIPKMESCVDAVIHGVSAAHVIDGRVAHSVLLELLTSGGVGTMVVPDTEMTN HHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC GTVYRKDNHV CEEEECCCCC >Mature Secondary Structure TATIDNLTSRERATVLADALPWLQRYRDKIVVVKYGGNAMVDEELKAAFAADMVFLRTV CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHC GVRPVVVHGGGPQISQMLQRLGIEGEFKGGFRVTSPEVLEIVRMVLFGQVGRDLVGLINS CCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCC HGPYAVGTSGEDAGLFRAEKRLVEIDGELTDIGQVGNITAVNASSLMGIIDAGRIPVVST CCCEEECCCCCCCHHHHHHHHHEEECCCEECCCCCCCEEEECHHHHHHHHCCCCCCEEEE IAPGDDGSVYNINADTAAGALAAALSAERLLILTNVEGLYTDWPNKDSLVSVIGAERLRE ECCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHH KLSALGSGMIPKMESCVDAVIHGVSAAHVIDGRVAHSVLLELLTSGGVGTMVVPDTEMTN HHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC GTVYRKDNHV CEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14602910