| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is argJ
Identifier: 38233758
GI number: 38233758
Start: 1160398
End: 1161558
Strand: Direct
Name: argJ
Synonym: DIP1168
Alternate gene names: 38233758
Gene position: 1160398-1161558 (Clockwise)
Preceding gene: 38233757
Following gene: 38233759
Centisome position: 46.63
GC content: 48.84
Gene sequence:
>1161_bases ATGAGTTCACGAGGAGTAACTGCTCCACAGGGGTTTGTTGCGGCAGGTGCGACTGCAGGAATTAAGCCATCCGGAAATAA AGATATGGCGTTGGTTGTAAACCAAGGGCCGGAATTTGTTGGTGCAGCGGTATTTACTCGGAATAGAGTTGTGGCATCGC CAGTCAAGTACACAAAGAAAGCGGTCGCAAATGGAACTTTACGTGCAGTTCTTTACAATTCCGGCAACGCGAACGCTTGT AATGGTGTACAAGGGGATAAAGACGTACATGAAATCGTGGACTATCTTGCCTCAAAGCTGAAGGTAGATCCACTAGACAT AGCGGCGTGTTCCACTGGTCTCATTGGAGAGCCGCTTCCAGTGACCATGATAAAAGCAGGCGTCGACAAGCTAATTCCTG CATTGGGGGATAACGGCGGGGAAGCTGCAGATTCGATCATGACGACCGATACGGTCGCTAAAGAAACAGTTGTCAAGTGT AATGGCTGGACATTAGGGGGTATGGGTAAAGGTGTCGGTATGATGGCCCCTTCCCTCGCCACGATGTTGGTATGTCTTAC TACTGATGCTTGTGTGACCCAAGCACAAGCTCACGCCGCTTTGTCCAAGGCATGCGACGTGACTTTTAATACTCTCGATA TTGATGGTTCAACCTCTACCAATGACACCGTAATTTTGTTGGCAAATGGGGCATCGGGAATCACGCCCACTGAATCAGAA TTTAACGACGCTGTCCTTCAGGCTTGTGCTGATATTGCCGATCAGCTGCAAGCTGATGCTGAGGGTGTGACAAAACGCGT GCGTATTACTGTTACTGGAACAACCACGGATTCCCAAGCACTGAATGCGGCTAGAACTTTGGGACGAGACAACCTGTTCA AGTGTGCGATGTTTGGTTCCGACCCGAATTGGGGGCGAGTTCTAGCTGCAGTTGGAATGGCTGATGCTGATATGGATCCA GATAACATATCGGTGTATTTCAATGATCAACCAGTATGCCTGCAATCCGGTGGCACTCCGGAAGCCCGTCAGGTGGACCT CTCTGGAATTGATATCGATGTTCGAGTTGATCTTGGAACAGGGGGACCTGGAAAGGCTTTTGTTCGAACGACCGATTTAT CACATCAATACGTTGAAATTAACTCAGCGTATTCCTCGTAA
Upstream 100 bases:
>100_bases TACCTTGTGGTGGTGTTGCGCCATAGGGAATTGAAAATCCTCCACTATGAGATTAAACGGGGTAGCGTACAACACAACTG GCAATGCGAAGGGAATTAAC
Downstream 100 bases:
>100_bases CTCAAACATTTCAGACAAGAAAGCCGGTGTGGGGCTATGACAGCCACTATCGATAATTTGACCTCCCGAGAGCGTGCAAC CGTACTGGCCGATGCATTGC
Product: bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein
Products: NA
Alternate protein names: Ornithine acetyltransferase; Ornithine transacetylase; OATase
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSSRGVTAPQGFVAAGATAGIKPSGNKDMALVVNQGPEFVGAAVFTRNRVVASPVKYTKKAVANGTLRAVLYNSGNANAC NGVQGDKDVHEIVDYLASKLKVDPLDIAACSTGLIGEPLPVTMIKAGVDKLIPALGDNGGEAADSIMTTDTVAKETVVKC NGWTLGGMGKGVGMMAPSLATMLVCLTTDACVTQAQAHAALSKACDVTFNTLDIDGSTSTNDTVILLANGASGITPTESE FNDAVLQACADIADQLQADAEGVTKRVRITVTGTTTDSQALNAARTLGRDNLFKCAMFGSDPNWGRVLAAVGMADADMDP DNISVYFNDQPVCLQSGGTPEARQVDLSGIDIDVRVDLGTGGPGKAFVRTTDLSHQYVEINSAYSS
Sequences:
>Translated_386_residues MSSRGVTAPQGFVAAGATAGIKPSGNKDMALVVNQGPEFVGAAVFTRNRVVASPVKYTKKAVANGTLRAVLYNSGNANAC NGVQGDKDVHEIVDYLASKLKVDPLDIAACSTGLIGEPLPVTMIKAGVDKLIPALGDNGGEAADSIMTTDTVAKETVVKC NGWTLGGMGKGVGMMAPSLATMLVCLTTDACVTQAQAHAALSKACDVTFNTLDIDGSTSTNDTVILLANGASGITPTESE FNDAVLQACADIADQLQADAEGVTKRVRITVTGTTTDSQALNAARTLGRDNLFKCAMFGSDPNWGRVLAAVGMADADMDP DNISVYFNDQPVCLQSGGTPEARQVDLSGIDIDVRVDLGTGGPGKAFVRTTDLSHQYVEINSAYSS >Mature_385_residues SSRGVTAPQGFVAAGATAGIKPSGNKDMALVVNQGPEFVGAAVFTRNRVVASPVKYTKKAVANGTLRAVLYNSGNANACN GVQGDKDVHEIVDYLASKLKVDPLDIAACSTGLIGEPLPVTMIKAGVDKLIPALGDNGGEAADSIMTTDTVAKETVVKCN GWTLGGMGKGVGMMAPSLATMLVCLTTDACVTQAQAHAALSKACDVTFNTLDIDGSTSTNDTVILLANGASGITPTESEF NDAVLQACADIADQLQADAEGVTKRVRITVTGTTTDSQALNAARTLGRDNLFKCAMFGSDPNWGRVLAAVGMADADMDPD NISVYFNDQPVCLQSGGTPEARQVDLSGIDIDVRVDLGTGGPGKAFVRTTDLSHQYVEINSAYSS
Specific function: Unknown
COG id: COG1364
COG function: function code E; N-acetylglutamate synthase (N-acetylornithine aminotransferase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgJ family
Homologues:
Organism=Saccharomyces cerevisiae, GI6323707, Length=415, Percent_Identity=33.0120481927711, Blast_Score=178, Evalue=1e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGJ_CORDI (P62059)
Other databases:
- EMBL: BX248357 - RefSeq: NP_939525.1 - ProteinModelPortal: P62059 - SMR: P62059 - MEROPS: T05.001 - GeneID: 2648568 - GenomeReviews: BX248353_GR - KEGG: cdi:DIP1168 - NMPDR: fig|257309.1.peg.1116 - HOGENOM: HBG284202 - OMA: VHENSAY - PhylomeDB: P62059 - ProtClustDB: PRK05388 - BioCyc: CDIP257309:DIP1168-MONOMER - BRENDA: 2.3.1.35 - GO: GO:0005737 - HAMAP: MF_01106 - InterPro: IPR002813 - InterPro: IPR016117 - PANTHER: PTHR23100 - TIGRFAMs: TIGR00120
Pfam domain/function: PF01960 ArgJ; SSF56266 Pept_S58_DmpA/Arg_biosyn_ArgJ
EC number: =2.3.1.35
Molecular weight: Translated: 39803; Mature: 39672
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRGVTAPQGFVAAGATAGIKPSGNKDMALVVNQGPEFVGAAVFTRNRVVASPVKYTKK CCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHEEECCCEEECHHHHHHH AVANGTLRAVLYNSGNANACNGVQGDKDVHEIVDYLASKLKVDPLDIAACSTGLIGEPLP HHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC VTMIKAGVDKLIPALGDNGGEAADSIMTTDTVAKETVVKCNGWTLGGMGKGVGMMAPSLA HHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCEEECCCCCCCHHHHHHHH TMLVCLTTDACVTQAQAHAALSKACDVTFNTLDIDGSTSTNDTVILLANGASGITPTESE HHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHH FNDAVLQACADIADQLQADAEGVTKRVRITVTGTTTDSQALNAARTLGRDNLFKCAMFGS HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECC DPNWGRVLAAVGMADADMDPDNISVYFNDQPVCLQSGGTPEARQVDLSGIDIDVRVDLGT CCCHHHHHEECCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEEECCCEEEEEEEECC GGPGKAFVRTTDLSHQYVEINSAYSS CCCCCEEEEEECCCCEEEEECCCCCC >Mature Secondary Structure SSRGVTAPQGFVAAGATAGIKPSGNKDMALVVNQGPEFVGAAVFTRNRVVASPVKYTKK CCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHEEECCCEEECHHHHHHH AVANGTLRAVLYNSGNANACNGVQGDKDVHEIVDYLASKLKVDPLDIAACSTGLIGEPLP HHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC VTMIKAGVDKLIPALGDNGGEAADSIMTTDTVAKETVVKCNGWTLGGMGKGVGMMAPSLA HHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCEEECCCCCCCHHHHHHHH TMLVCLTTDACVTQAQAHAALSKACDVTFNTLDIDGSTSTNDTVILLANGASGITPTESE HHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHH FNDAVLQACADIADQLQADAEGVTKRVRITVTGTTTDSQALNAARTLGRDNLFKCAMFGS HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECC DPNWGRVLAAVGMADADMDPDNISVYFNDQPVCLQSGGTPEARQVDLSGIDIDVRVDLGT CCCHHHHHEECCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEEECCCEEEEEEEECC GGPGKAFVRTTDLSHQYVEINSAYSS CCCCCEEEEEECCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14602910