| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is 38233708
Identifier: 38233708
GI number: 38233708
Start: 1101650
End: 1103803
Strand: Direct
Name: 38233708
Synonym: DIP1118
Alternate gene names: NA
Gene position: 1101650-1103803 (Clockwise)
Preceding gene: 38233706
Following gene: 38233709
Centisome position: 44.27
GC content: 55.8
Gene sequence:
>2154_bases ATGTTTGAGGTGCTATACGGCAGCCGAAAACGGGCGCTTTTCACCGTTATCGGCTGGATAATCATGATCGGGGTGTTTGC TGCACTGGCACCAACAATTGATGACGTCCTCACTAAGGGCAACAATAACGCGGGCGCTGATGCTGCATCGACACAGGCTG CACAACTGATTGAAATGAATTTTCCTGATGCTGACGCAGTTCCCGCGATCCTGACGGTGCGAGGCGGAGACGCTAACGTA TCCAAAGTGTTGGCGGCAGTCGATTCGGTGAGAGAAAACGTTGACCGCTTTGGGCCGTCGATAAGCGCGGCGTGCAAACG TCCCAGTCCTACGTGCGTTCCCGCTAGCACAACGGAAATGACCAGCGGTGACACCAATCTAGTGGTCATACCAGTCACAG GTGATCCCACGACGACCGAATATCGCGACGATATTAAGACGCTACGTGCCGAGCTCGCTCATGCATTTGGGGTAGAAGAC CTAACTCCCGATGCAGCACCTGTCCATGTGACTGGTCCGGTGGGCATTGTTACTGACACCGTGAACGTGTTCGCTGGTGG AGACAAGATTCTGTTATTGGCAACGATGCTGCTCGTTTTGGTTATTTTGCTTGCCGTTTACCGTGCACCGCTCATGGCGC TACTGCCGCTGTTCGCGGTAGGTATGGCCATGCGACTGGCTCAGACTGGTGGTGCACTTCTTGCCGACGCTGGAATCATT AATATCTCCAGCCAGACCGCATCTATTATGACCGTGCTGCTTTTCGGCGTGGGCACTGACTATGCGCTGATCATTAATGC CCGCTGGCGCGAACATCTCCGAGACACCAACGATCCAGCGCGTGCAATGATCGTCGCGATGGGGCATGTGCTCCCTGTGC TGCTGTCTAGTGCCGGCACCATTGTTGCCGCGATGCTCGCTCTGTTAACCACTACTTCTCCCACTCTCCAAGGATTTGGC CCCTACCTAGCTATTGGTGTCGTATCTGCAATGATCGCGGCACTGACGCTTCTGCCAGCGCTGATGGTGTTAGCTGGACG TGTTGCGCTGTGGCCAAACAAACCTGAACTTGGCCACGACTCCAAGATCTGGACCAAAGTGGCTGATCTGGTTACCACAA AGCCCAAGGCCATTTTGGCTGGTACTGCGGCGCTCATGGTTGTTCTAGCGCTCGGTCTGCTCAACTACTCAGTTTCCTAC AACCTGATGTCAGGCTTCCGCATCGCAACTGATTCAGCCGCTGGCCAGAAGGTAATCGCGCAGGACTTTGGTGAAGGTGA AATCGCGCCGTCCACCATGATTGTCACTGGCCCAGGCGCAGACGCAGCAGCTAAGGCGATTGCTGAACAACTCCCGCAAC AGCTTCCAGGGGACGTCACGCGCGCAGCCTTTTCGCCTCGGAAGGACGTGACCGAAGACGGCTCGGCTGCCCGTGTCGAC GTAGTGCTCAACGCTGATCCATACTCCACGACGGCCTTTGACATGTTGGACCGCGCTACGGAACAAGCAGGTGAGATCGC AGGTTCCGAAGTGAGAGTTGCCAGCGCTGGTGAAACCGCCACTGCCCGAGATAGTGCTGCCGAGGTCACTCACGACTTCA CACTCCTTGTGCCACTGATCTTCCTTGTGATCGCTTTGATCCTCGGACTGTTGCTGCGGTCGTGGCTGGCTCCGATCTAT CTCATCGCCACACTTGGCCTATCGTTTGCAGCAACGCTCGGCCTCGTTGCCTTTATCACCCTCACGGTGCAAGGCGATAC CGGTTTTGGCAGCTACGTGCCGGTGTATGTGCTGGTGTTCCTCACAGCGCTTGGTGTCGACTACACCATCTTTGTGATGG CACGATTGCGTGAAGAAATGCGAGATAAAACCATGGCGGAAGCCATGCGCCGCGCAATTATTGCCACCGGTGGCGTGGTG TCTTCTGCAGGACTTATTTTGGCCGCAACATTTGCCGTGCTGATGACGCAGCCCATCCGCGAGCTCTACCAATTCGGTAT GGCCATGATGCTCGGCATTTTGATCGACACTTTTATCATCCGACCGCTCATGGTACCGGCAATCGTTACCCTCCTAGGTG ATCGCGCGCTGCTGCCAGCGAAGCCAAGGCAGGAGAGCTGCGAGGCTTCTATAGAGCCTGTGCCTGCCTCATAA
Upstream 100 bases:
>100_bases CGGCCGGGGTTATCTGGTTGCAAGAATGTGACAGGGTGTCACATAATAGGCACGACTGTGACACCTTGTCACGGCTGGGT TGACTATGAGGAAGACAAAC
Downstream 100 bases:
>100_bases TCAATCTGTAACGCCCGAAGGGGCGACACCTGTGTCCATGCCGGTCATAGGCGCCGCCCTTTCACATTATCCATCGGGGG TAATTGGGTAGGCATGATTA
Product: MmpL family integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 717; Mature: 717
Protein sequence:
>717_residues MFEVLYGSRKRALFTVIGWIIMIGVFAALAPTIDDVLTKGNNNAGADAASTQAAQLIEMNFPDADAVPAILTVRGGDANV SKVLAAVDSVRENVDRFGPSISAACKRPSPTCVPASTTEMTSGDTNLVVIPVTGDPTTTEYRDDIKTLRAELAHAFGVED LTPDAAPVHVTGPVGIVTDTVNVFAGGDKILLLATMLLVLVILLAVYRAPLMALLPLFAVGMAMRLAQTGGALLADAGII NISSQTASIMTVLLFGVGTDYALIINARWREHLRDTNDPARAMIVAMGHVLPVLLSSAGTIVAAMLALLTTTSPTLQGFG PYLAIGVVSAMIAALTLLPALMVLAGRVALWPNKPELGHDSKIWTKVADLVTTKPKAILAGTAALMVVLALGLLNYSVSY NLMSGFRIATDSAAGQKVIAQDFGEGEIAPSTMIVTGPGADAAAKAIAEQLPQQLPGDVTRAAFSPRKDVTEDGSAARVD VVLNADPYSTTAFDMLDRATEQAGEIAGSEVRVASAGETATARDSAAEVTHDFTLLVPLIFLVIALILGLLLRSWLAPIY LIATLGLSFAATLGLVAFITLTVQGDTGFGSYVPVYVLVFLTALGVDYTIFVMARLREEMRDKTMAEAMRRAIIATGGVV SSAGLILAATFAVLMTQPIRELYQFGMAMMLGILIDTFIIRPLMVPAIVTLLGDRALLPAKPRQESCEASIEPVPAS
Sequences:
>Translated_717_residues MFEVLYGSRKRALFTVIGWIIMIGVFAALAPTIDDVLTKGNNNAGADAASTQAAQLIEMNFPDADAVPAILTVRGGDANV SKVLAAVDSVRENVDRFGPSISAACKRPSPTCVPASTTEMTSGDTNLVVIPVTGDPTTTEYRDDIKTLRAELAHAFGVED LTPDAAPVHVTGPVGIVTDTVNVFAGGDKILLLATMLLVLVILLAVYRAPLMALLPLFAVGMAMRLAQTGGALLADAGII NISSQTASIMTVLLFGVGTDYALIINARWREHLRDTNDPARAMIVAMGHVLPVLLSSAGTIVAAMLALLTTTSPTLQGFG PYLAIGVVSAMIAALTLLPALMVLAGRVALWPNKPELGHDSKIWTKVADLVTTKPKAILAGTAALMVVLALGLLNYSVSY NLMSGFRIATDSAAGQKVIAQDFGEGEIAPSTMIVTGPGADAAAKAIAEQLPQQLPGDVTRAAFSPRKDVTEDGSAARVD VVLNADPYSTTAFDMLDRATEQAGEIAGSEVRVASAGETATARDSAAEVTHDFTLLVPLIFLVIALILGLLLRSWLAPIY LIATLGLSFAATLGLVAFITLTVQGDTGFGSYVPVYVLVFLTALGVDYTIFVMARLREEMRDKTMAEAMRRAIIATGGVV SSAGLILAATFAVLMTQPIRELYQFGMAMMLGILIDTFIIRPLMVPAIVTLLGDRALLPAKPRQESCEASIEPVPAS >Mature_717_residues MFEVLYGSRKRALFTVIGWIIMIGVFAALAPTIDDVLTKGNNNAGADAASTQAAQLIEMNFPDADAVPAILTVRGGDANV SKVLAAVDSVRENVDRFGPSISAACKRPSPTCVPASTTEMTSGDTNLVVIPVTGDPTTTEYRDDIKTLRAELAHAFGVED LTPDAAPVHVTGPVGIVTDTVNVFAGGDKILLLATMLLVLVILLAVYRAPLMALLPLFAVGMAMRLAQTGGALLADAGII NISSQTASIMTVLLFGVGTDYALIINARWREHLRDTNDPARAMIVAMGHVLPVLLSSAGTIVAAMLALLTTTSPTLQGFG PYLAIGVVSAMIAALTLLPALMVLAGRVALWPNKPELGHDSKIWTKVADLVTTKPKAILAGTAALMVVLALGLLNYSVSY NLMSGFRIATDSAAGQKVIAQDFGEGEIAPSTMIVTGPGADAAAKAIAEQLPQQLPGDVTRAAFSPRKDVTEDGSAARVD VVLNADPYSTTAFDMLDRATEQAGEIAGSEVRVASAGETATARDSAAEVTHDFTLLVPLIFLVIALILGLLLRSWLAPIY LIATLGLSFAATLGLVAFITLTVQGDTGFGSYVPVYVLVFLTALGVDYTIFVMARLREEMRDKTMAEAMRRAIIATGGVV SSAGLILAATFAVLMTQPIRELYQFGMAMMLGILIDTFIIRPLMVPAIVTLLGDRALLPAKPRQESCEASIEPVPAS
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004869 - InterPro: IPR000731 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 75215; Mature: 75215
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEVLYGSRKRALFTVIGWIIMIGVFAALAPTIDDVLTKGNNNAGADAASTQAAQLIEMN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC FPDADAVPAILTVRGGDANVSKVLAAVDSVRENVDRFGPSISAACKRPSPTCVPASTTEM CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCC TSGDTNLVVIPVTGDPTTTEYRDDIKTLRAELAHAFGVEDLTPDAAPVHVTGPVGIVTDT CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECC VNVFAGGDKILLLATMLLVLVILLAVYRAPLMALLPLFAVGMAMRLAQTGGALLADAGII HHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEE NISSQTASIMTVLLFGVGTDYALIINARWREHLRDTNDPARAMIVAMGHVLPVLLSSAGT EECCHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHH IVAAMLALLTTTSPTLQGFGPYLAIGVVSAMIAALTLLPALMVLAGRVALWPNKPELGHD HHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCC SKIWTKVADLVTTKPKAILAGTAALMVVLALGLLNYSVSYNLMSGFRIATDSAAGQKVIA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCEEECCCCCCCHHHH QDFGEGEIAPSTMIVTGPGADAAAKAIAEQLPQQLPGDVTRAAFSPRKDVTEDGSAARVD HHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEE VVLNADPYSTTAFDMLDRATEQAGEIAGSEVRVASAGETATARDSAAEVTHDFTLLVPLI EEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHH FLVIALILGLLLRSWLAPIYLIATLGLSFAATLGLVAFITLTVQGDTGFGSYVPVYVLVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHH LTALGVDYTIFVMARLREEMRDKTMAEAMRRAIIATGGVVSSAGLILAATFAVLMTQPIR HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ELYQFGMAMMLGILIDTFIIRPLMVPAIVTLLGDRALLPAKPRQESCEASIEPVPAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCC >Mature Secondary Structure MFEVLYGSRKRALFTVIGWIIMIGVFAALAPTIDDVLTKGNNNAGADAASTQAAQLIEMN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC FPDADAVPAILTVRGGDANVSKVLAAVDSVRENVDRFGPSISAACKRPSPTCVPASTTEM CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCC TSGDTNLVVIPVTGDPTTTEYRDDIKTLRAELAHAFGVEDLTPDAAPVHVTGPVGIVTDT CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECC VNVFAGGDKILLLATMLLVLVILLAVYRAPLMALLPLFAVGMAMRLAQTGGALLADAGII HHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEE NISSQTASIMTVLLFGVGTDYALIINARWREHLRDTNDPARAMIVAMGHVLPVLLSSAGT EECCHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHH IVAAMLALLTTTSPTLQGFGPYLAIGVVSAMIAALTLLPALMVLAGRVALWPNKPELGHD HHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCC SKIWTKVADLVTTKPKAILAGTAALMVVLALGLLNYSVSYNLMSGFRIATDSAAGQKVIA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCEEECCCCCCCHHHH QDFGEGEIAPSTMIVTGPGADAAAKAIAEQLPQQLPGDVTRAAFSPRKDVTEDGSAARVD HHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEE VVLNADPYSTTAFDMLDRATEQAGEIAGSEVRVASAGETATARDSAAEVTHDFTLLVPLI EEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHH FLVIALILGLLLRSWLAPIYLIATLGLSFAATLGLVAFITLTVQGDTGFGSYVPVYVLVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHH LTALGVDYTIFVMARLREEMRDKTMAEAMRRAIIATGGVVSSAGLILAATFAVLMTQPIR HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ELYQFGMAMMLGILIDTFIIRPLMVPAIVTLLGDRALLPAKPRQESCEASIEPVPAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]