| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233709
Identifier: 38233709
GI number: 38233709
Start: 1103979
End: 1105439
Strand: Direct
Name: 38233709
Synonym: DIP1119
Alternate gene names: NA
Gene position: 1103979-1105439 (Clockwise)
Preceding gene: 38233708
Following gene: 38233710
Centisome position: 44.36
GC content: 53.59
Gene sequence:
>1461_bases ATGTCGCGTGCGGCGTTGGGTATTCGTTCATCGTGGGTTGGATTTGTCGCGGCGGCGACCACCGCAATGGCTAGCACTAT TGCTCCTGTTGCGTATGCACAAGTGGCACATCACGTGCCAAATGATGGATGCAGCGCAGTGGAGGTTGCAGTAGTTGGCG GAACAACTCAAGCAAATATTCACGACGATCCCCATGACGTGTACAGCTTTGGCAAGGGAACCAACTTTGCGGTAAATATG ACGCGGCGATTCCATAACGTTACCGCGTGGCAATTGCCTTATTACTCATCGGCAGGAATCACAGCCTCGAACAACGACGC TGAACAAAAAGAATTCCCGCCCTATGCAGTCTCTAAAAACCGCGGAGTTGATGTGCTTGATGCGCACCTCTCCGATCAGG CCGTGAAGTGTCCAGATACCCAATTCGTGATCGCAGGCTTTTCCCAAGGCGCGGACATCGCAGGTGATATGGCTGAGCGT ATTTCCCGTGGCAAGACTAACCCTGCACTTACTCCGGAACGAGTTCTTGGCGTTTATCTTTTGGCAGACCCAGGGCGCTC GGATCTGCCCATGAACCCCACGCAAGGGCAGACAACGACGGGCAAGAGTGGCCCGTTGACCGACAACGGTGCCGTGCTGA TCGAAACAAACCTCGGTCTTCCTGGTGCAGGTTCTGTAGGCATTGCAGGGCCACGTGCAGCGGGGGCATTTAGTAACCTT CCCGGAAAAGTTCGCTCAATCTGCAGTAGTGGTGATCCCGCCTGTGCGGTCCACCCGAAAGGTCTGCTGGCATCCGTGGG GAAGTGGGCAAACGATCAAAACGATTTTGAACACGTACCTGTGGAATCTGTACGCACGATGATGCTCAATGGCTCATTCT TCATTTCGCTTGCACCGCACATGAACAAGATCCGAGGCGACTTGTATGCTTCGGATCCGGTTGCGCTCAAACAACACTTT GACGACGCCTCCATGCACCCGCGTCTTACACAGCCTGAACGTAATACTCTTCACCTCGTAGGTGCAGAAATTGCTGGACT TATGGGGCACCTTAAACAAGGGCGCGATCAGGTAGCAGTTGGCTCTAGTGATACTGGATTAAGTAGTGGCGGACCGCGCG ATCGGCTTATTGCCTTGGAAAAAATCGTTCAGCAGCAAACTGGACTTGTGGAACTTCAGCTCGCTGTTGGGTTGATGATC GTTCACCTTAGCTACACAGGGGATAGCCGTGAGGTCAGCACAGTGGGCGCGCAGCGTGCCGATGACTGGATCGATAGCGA CATGACGCAGCTCATTAGTGGATATCTAAACACCCTTTCAGTACGCGCACCCTACGTCACGCTTGGCGAACGCCATACGT TCATCCAAAAAATGGGCTGGCCGATTTGGTGGATTGTGAGCTCAATTTGGGGTCAGCGTAATCACGCCGCTCGTGGAGTA TGGGAGTTCTTCGGACTCTAA
Upstream 100 bases:
>100_bases GGGGGTAATTGGGTAGGCATGATTAAAAAACTAGAGGGAATGAGCCTTAGACTGAGAAAGTCTTAATCAAAAAATTTCAG CTGTTTTAGGGGAAACGAAG
Downstream 100 bases:
>100_bases CCTGCGAGCAATGTCAAGGAGAGTTATGTCTCAACAAAAATACTGTTTTAACAGGCGTAACCCTCCTACAATGAGGTCTT GTCAGGGTGATCGGATCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Carbohydrate Esterase; Envelope Lipids Regulation Factor; Secreted Protein
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MSRAALGIRSSWVGFVAAATTAMASTIAPVAYAQVAHHVPNDGCSAVEVAVVGGTTQANIHDDPHDVYSFGKGTNFAVNM TRRFHNVTAWQLPYYSSAGITASNNDAEQKEFPPYAVSKNRGVDVLDAHLSDQAVKCPDTQFVIAGFSQGADIAGDMAER ISRGKTNPALTPERVLGVYLLADPGRSDLPMNPTQGQTTTGKSGPLTDNGAVLIETNLGLPGAGSVGIAGPRAAGAFSNL PGKVRSICSSGDPACAVHPKGLLASVGKWANDQNDFEHVPVESVRTMMLNGSFFISLAPHMNKIRGDLYASDPVALKQHF DDASMHPRLTQPERNTLHLVGAEIAGLMGHLKQGRDQVAVGSSDTGLSSGGPRDRLIALEKIVQQQTGLVELQLAVGLMI VHLSYTGDSREVSTVGAQRADDWIDSDMTQLISGYLNTLSVRAPYVTLGERHTFIQKMGWPIWWIVSSIWGQRNHAARGV WEFFGL
Sequences:
>Translated_486_residues MSRAALGIRSSWVGFVAAATTAMASTIAPVAYAQVAHHVPNDGCSAVEVAVVGGTTQANIHDDPHDVYSFGKGTNFAVNM TRRFHNVTAWQLPYYSSAGITASNNDAEQKEFPPYAVSKNRGVDVLDAHLSDQAVKCPDTQFVIAGFSQGADIAGDMAER ISRGKTNPALTPERVLGVYLLADPGRSDLPMNPTQGQTTTGKSGPLTDNGAVLIETNLGLPGAGSVGIAGPRAAGAFSNL PGKVRSICSSGDPACAVHPKGLLASVGKWANDQNDFEHVPVESVRTMMLNGSFFISLAPHMNKIRGDLYASDPVALKQHF DDASMHPRLTQPERNTLHLVGAEIAGLMGHLKQGRDQVAVGSSDTGLSSGGPRDRLIALEKIVQQQTGLVELQLAVGLMI VHLSYTGDSREVSTVGAQRADDWIDSDMTQLISGYLNTLSVRAPYVTLGERHTFIQKMGWPIWWIVSSIWGQRNHAARGV WEFFGL >Mature_485_residues SRAALGIRSSWVGFVAAATTAMASTIAPVAYAQVAHHVPNDGCSAVEVAVVGGTTQANIHDDPHDVYSFGKGTNFAVNMT RRFHNVTAWQLPYYSSAGITASNNDAEQKEFPPYAVSKNRGVDVLDAHLSDQAVKCPDTQFVIAGFSQGADIAGDMAERI SRGKTNPALTPERVLGVYLLADPGRSDLPMNPTQGQTTTGKSGPLTDNGAVLIETNLGLPGAGSVGIAGPRAAGAFSNLP GKVRSICSSGDPACAVHPKGLLASVGKWANDQNDFEHVPVESVRTMMLNGSFFISLAPHMNKIRGDLYASDPVALKQHFD DASMHPRLTQPERNTLHLVGAEIAGLMGHLKQGRDQVAVGSSDTGLSSGGPRDRLIALEKIVQQQTGLVELQLAVGLMIV HLSYTGDSREVSTVGAQRADDWIDSDMTQLISGYLNTLSVRAPYVTLGERHTFIQKMGWPIWWIVSSIWGQRNHAARGVW EFFGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51876; Mature: 51745
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAALGIRSSWVGFVAAATTAMASTIAPVAYAQVAHHVPNDGCSAVEVAVVGGTTQANI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEECCC HDDPHDVYSFGKGTNFAVNMTRRFHNVTAWQLPYYSSAGITASNNDAEQKEFPPYAVSKN CCCHHHHHHCCCCCCEEEEEEHHHCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCC RGVDVLDAHLSDQAVKCPDTQFVIAGFSQGADIAGDMAERISRGKTNPALTPERVLGVYL CCCEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHEEEEEE LADPGRSDLPMNPTQGQTTTGKSGPLTDNGAVLIETNLGLPGAGSVGIAGPRAAGAFSNL EECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHCC PGKVRSICSSGDPACAVHPKGLLASVGKWANDQNDFEHVPVESVRTMMLNGSFFISLAPH CHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCH MNKIRGDLYASDPVALKQHFDDASMHPRLTQPERNTLHLVGAEIAGLMGHLKQGRDQVAV HHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEEE GSSDTGLSSGGPRDRLIALEKIVQQQTGLVELQLAVGLMIVHLSYTGDSREVSTVGAQRA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHCEEEEEEEECCCCCCHHHHCCHHH DDWIDSDMTQLISGYLNTLSVRAPYVTLGERHTFIQKMGWPIWWIVSSIWGQRNHAARGV HHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHH WEFFGL HHHHCC >Mature Secondary Structure SRAALGIRSSWVGFVAAATTAMASTIAPVAYAQVAHHVPNDGCSAVEVAVVGGTTQANI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEECCC HDDPHDVYSFGKGTNFAVNMTRRFHNVTAWQLPYYSSAGITASNNDAEQKEFPPYAVSKN CCCHHHHHHCCCCCCEEEEEEHHHCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCC RGVDVLDAHLSDQAVKCPDTQFVIAGFSQGADIAGDMAERISRGKTNPALTPERVLGVYL CCCEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHEEEEEE LADPGRSDLPMNPTQGQTTTGKSGPLTDNGAVLIETNLGLPGAGSVGIAGPRAAGAFSNL EECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHCC PGKVRSICSSGDPACAVHPKGLLASVGKWANDQNDFEHVPVESVRTMMLNGSFFISLAPH CHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCH MNKIRGDLYASDPVALKQHFDDASMHPRLTQPERNTLHLVGAEIAGLMGHLKQGRDQVAV HHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEEE GSSDTGLSSGGPRDRLIALEKIVQQQTGLVELQLAVGLMIVHLSYTGDSREVSTVGAQRA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHCEEEEEEEECCCCCCHHHHCCHHH DDWIDSDMTQLISGYLNTLSVRAPYVTLGERHTFIQKMGWPIWWIVSSIWGQRNHAARGV HHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHH WEFFGL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA