| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233706
Identifier: 38233706
GI number: 38233706
Start: 1099572
End: 1100606
Strand: Direct
Name: 38233706
Synonym: DIP1116
Alternate gene names: NA
Gene position: 1099572-1100606 (Clockwise)
Preceding gene: 38233705
Following gene: 38233708
Centisome position: 44.18
GC content: 56.33
Gene sequence:
>1035_bases GTGTTCGATGCGACGCGGGCGGCGTTTTTAGGGGTGGCCGTTTTTATCAGCGTGCTTCTAGTTGCATCTTTTTTCAGTCC AACCCCAGGGAGAGCGGTGGAGCCGGCGCCAGCCGGGGCTCCAGCGCAGGAAGGCTCCTTGCCTCATGATGGGCTCGGTT CTATCAAGCCGATCCATGATGTCGACTTAGGCGGGGTGGAGCAGCCGCCATTGCCAGCACCTGTTGACCCTGATCCTTCT TTTAATCCGCAGCCACCTTTTGCCCCTGGTGAATTGCGTGAGGGCTTTGTTGACGTGGGTAATGGGAATATTCGTCGCTA CCTGATCCACGTGGGAACGAACTATCAGCCACATGCCCCAGAATTAACTCCCGTGGTATTTGGCTTTGGTGGTTGGAAAG ACACGCCAGAAAAGTTTGCTGACTATTCGCGTTTTGGACTTACTGACTTCGGGGCGAACGCCATGATCATTTACCCAGAG GGAATCGCACGTGCGTGGGAGGGGGCTCCTTATGCGGCTACTCGCGTGGGGGACGATGTTCATTTCGTGCGAACAATCCT GAATGCCGTAGATGCTGACTATCGGATCGATCGTAGCCGCGTTTATGCAGTGGGGATGTCTAACGGTGGCGGAATGGCTG CTTCGCTTGCCTGCCATGCTCCTGATCTCGTTGCAGGTGTTGTCAGTGTCTCGGCAGCTTATTATGAGCCTGTGGTAGCC GATTGCGCGCCCGGTGCGGTGGCGACTCTCGACATTCATGGAACGCATGACGAGGTCATTGCTTATCAGGGTGGTATGCG CCATGGTGCACCATTCCTTGGTGCCGAACAAGTGGTGGCGGGGGTTGCTGCCCGTAACGGATGTGGGCCTGCATTGCCAC CGCGATGGATTGAAGGGCCTGCAGAGCACTATGGGTTTGCTGGCTGTGCTGCGCCGGTGGAGCATGTCCGAGTTCTGGGG CAAAAACATGTTTGGAATGGGGTTCCGCATGCCACCACGTTGGCGTGGGAGTTCTTGCACCATCAACACAAATAA
Upstream 100 bases:
>100_bases AAAAATTGTTGCAACTATTGAATATGTTGCTTATGTGACTAATGTTAAACAAGTGATATTTGGGTATGTGGGCCTTGGTG GCCGAAGAAAAGGTGCAGTA
Downstream 100 bases:
>100_bases ATAAAGTGGCGTTTACCAGAGGATTTGCGTGATCTTCTGCCTTGTGGTTATATTAATCCCCGTTGAACAGTGTGGCTCAC AGAGGGCAATCTGGTAAACA
Product: putative exported esterase/hydrolase
Products: NA
Alternate protein names: Poly(3-Hydroxybutyrate) Depolymerase-Like Protein; Phospholipase/Carboxylesterase; Esterase/Lipase/Thioesterase; Lipoprotein; Secreted Hydrolase; Secreted Esterase; Hydrolase; Exported Esterase/Hydrolase; Poly(3-Hydroxybutyrate) Depolymerase; Secreted Protein
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MFDATRAAFLGVAVFISVLLVASFFSPTPGRAVEPAPAGAPAQEGSLPHDGLGSIKPIHDVDLGGVEQPPLPAPVDPDPS FNPQPPFAPGELREGFVDVGNGNIRRYLIHVGTNYQPHAPELTPVVFGFGGWKDTPEKFADYSRFGLTDFGANAMIIYPE GIARAWEGAPYAATRVGDDVHFVRTILNAVDADYRIDRSRVYAVGMSNGGGMAASLACHAPDLVAGVVSVSAAYYEPVVA DCAPGAVATLDIHGTHDEVIAYQGGMRHGAPFLGAEQVVAGVAARNGCGPALPPRWIEGPAEHYGFAGCAAPVEHVRVLG QKHVWNGVPHATTLAWEFLHHQHK
Sequences:
>Translated_344_residues MFDATRAAFLGVAVFISVLLVASFFSPTPGRAVEPAPAGAPAQEGSLPHDGLGSIKPIHDVDLGGVEQPPLPAPVDPDPS FNPQPPFAPGELREGFVDVGNGNIRRYLIHVGTNYQPHAPELTPVVFGFGGWKDTPEKFADYSRFGLTDFGANAMIIYPE GIARAWEGAPYAATRVGDDVHFVRTILNAVDADYRIDRSRVYAVGMSNGGGMAASLACHAPDLVAGVVSVSAAYYEPVVA DCAPGAVATLDIHGTHDEVIAYQGGMRHGAPFLGAEQVVAGVAARNGCGPALPPRWIEGPAEHYGFAGCAAPVEHVRVLG QKHVWNGVPHATTLAWEFLHHQHK >Mature_344_residues MFDATRAAFLGVAVFISVLLVASFFSPTPGRAVEPAPAGAPAQEGSLPHDGLGSIKPIHDVDLGGVEQPPLPAPVDPDPS FNPQPPFAPGELREGFVDVGNGNIRRYLIHVGTNYQPHAPELTPVVFGFGGWKDTPEKFADYSRFGLTDFGANAMIIYPE GIARAWEGAPYAATRVGDDVHFVRTILNAVDADYRIDRSRVYAVGMSNGGGMAASLACHAPDLVAGVVSVSAAYYEPVVA DCAPGAVATLDIHGTHDEVIAYQGGMRHGAPFLGAEQVVAGVAARNGCGPALPPRWIEGPAEHYGFAGCAAPVEHVRVLG QKHVWNGVPHATTLAWEFLHHQHK
Specific function: Unknown
COG id: COG3509
COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36314; Mature: 36314
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDATRAAFLGVAVFISVLLVASFFSPTPGRAVEPAPAGAPAQEGSLPHDGLGSIKPIHD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VDLGGVEQPPLPAPVDPDPSFNPQPPFAPGELREGFVDVGNGNIRRYLIHVGTNYQPHAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEECCCCCEEEEEEEECCCCCCCCC ELTPVVFGFGGWKDTPEKFADYSRFGLTDFGANAMIIYPEGIARAWEGAPYAATRVGDDV CCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHCCCCCCHHHCCCHH HFVRTILNAVDADYRIDRSRVYAVGMSNGGGMAASLACHAPDLVAGVVSVSAAYYEPVVA HHHHHHHHHHCCCCEECCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHH DCAPGAVATLDIHGTHDEVIAYQGGMRHGAPFLGAEQVVAGVAARNGCGPALPPRWIEGP CCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCC AEHYGFAGCAAPVEHVRVLGQKHVWNGVPHATTLAWEFLHHQHK HHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MFDATRAAFLGVAVFISVLLVASFFSPTPGRAVEPAPAGAPAQEGSLPHDGLGSIKPIHD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VDLGGVEQPPLPAPVDPDPSFNPQPPFAPGELREGFVDVGNGNIRRYLIHVGTNYQPHAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEECCCCCEEEEEEEECCCCCCCCC ELTPVVFGFGGWKDTPEKFADYSRFGLTDFGANAMIIYPEGIARAWEGAPYAATRVGDDV CCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHCCCCCCHHHCCCHH HFVRTILNAVDADYRIDRSRVYAVGMSNGGGMAASLACHAPDLVAGVVSVSAAYYEPVVA HHHHHHHHHHCCCCEECCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHH DCAPGAVATLDIHGTHDEVIAYQGGMRHGAPFLGAEQVVAGVAARNGCGPALPPRWIEGP CCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCC AEHYGFAGCAAPVEHVRVLGQKHVWNGVPHATTLAWEFLHHQHK HHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA