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The map label for this gene is gatC

Identifier: 38233673

GI number: 38233673

Start: 1061719

End: 1062018

Strand: Direct

Name: gatC

Synonym: DIP1079

Alternate gene names: 38233673

Gene position: 1061719-1062018 (Clockwise)

Preceding gene: 38233671

Following gene: 38233674

Centisome position: 42.66

GC content: 54.67

Gene sequence:

>300_bases
GTGCCTGAGATTTCGCGCGATGAAGTCGCCCACTTGGCCAAGCTGTCTCGTTTGGCGTTGACTGATGAAGAACTGGATCG
ATTTGCCGAGCAAATCGACGGAATTATCGGAAACGTGAGCGCAGTGCAGCAGGTAGCAGCAGAAGGCGTGGAGCCTATGA
GCCACCCGCACTCTATTAAAACCACGATGCGTGAGGACGTCGTTGAACAGATCCTCACTCCAGAACAGGCGCTTGATCAA
GCACCAGCCGTCGACCAGCAGCGCTTCGTCGTGCCACAGATTTTGGGGGAGCAAGATTAA

Upstream 100 bases:

>100_bases
TCGAGGGTGCAGTAGTATGTTGTAAGTCGGATGCGTCTTTGAATGAAGGCGTCTTTGAGAATGTAGAACAACACCCCAAC
GTGAGTTAAGGATCGACGTA

Downstream 100 bases:

>100_bases
TGAATAAATACCTCGTACCAGATTCCGGACTTACTTCCTTGTCCGCTGCCGAACTGGCAGAAAAAATCCACAGCCGCGAA
GTAACCTCTCGTGAAGTTAC

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MPEISRDEVAHLAKLSRLALTDEELDRFAEQIDGIIGNVSAVQQVAAEGVEPMSHPHSIKTTMREDVVEQILTPEQALDQ
APAVDQQRFVVPQILGEQD

Sequences:

>Translated_99_residues
MPEISRDEVAHLAKLSRLALTDEELDRFAEQIDGIIGNVSAVQQVAAEGVEPMSHPHSIKTTMREDVVEQILTPEQALDQ
APAVDQQRFVVPQILGEQD
>Mature_98_residues
PEISRDEVAHLAKLSRLALTDEELDRFAEQIDGIIGNVSAVQQVAAEGVEPMSHPHSIKTTMREDVVEQILTPEQALDQA
PAVDQQRFVVPQILGEQD

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_CORDI (Q6NHQ2)

Other databases:

- EMBL:   BX248357
- RefSeq:   NP_939440.1
- ProteinModelPortal:   Q6NHQ2
- SMR:   Q6NHQ2
- GeneID:   2649339
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP1079
- NMPDR:   fig|257309.1.peg.1031
- HOGENOM:   HBG586403
- OMA:   MFVAPRI
- ProtClustDB:   PRK00034
- BioCyc:   CDIP257309:DIP1079-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10941; Mature: 10810

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEISRDEVAHLAKLSRLALTDEELDRFAEQIDGIIGNVSAVQQVAAEGVEPMSHPHSIK
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHH
TTMREDVVEQILTPEQALDQAPAVDQQRFVVPQILGEQD
HHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
PEISRDEVAHLAKLSRLALTDEELDRFAEQIDGIIGNVSAVQQVAAEGVEPMSHPHSIK
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHH
TTMREDVVEQILTPEQALDQAPAVDQQRFVVPQILGEQD
HHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14602910