| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is fklB [C]
Identifier: 38233385
GI number: 38233385
Start: 767015
End: 767374
Strand: Direct
Name: fklB [C]
Synonym: DIP0786
Alternate gene names: 38233385
Gene position: 767015-767374 (Clockwise)
Preceding gene: 161598677
Following gene: 38233387
Centisome position: 30.82
GC content: 59.72
Gene sequence:
>360_bases ATGGAAAAGCCCCAGATCCAGGTTCCCGAAGGACCAGCCCCAGAAGACATCGTTATCGTCGACCTCATTGAGGGCGATGG CGCAGAAGCACAGCCAGGTGGCCTTGTAGAGGTTCACTACGTAGGCGTCGACTTTGAAAACGGCCAAGAGTTCGACTCCT CTTGGGACCGCGGCCAAAGCATCGAGTTCCCATTGTCTGGCCTCATCGCTGGCTGGCAAGAAGGCATCCCAGGCATGAAG GTTGGCGGACGCCGCCAGCTCACCATTCCACCAGAGGCAGCCTACGGTCCTGCCGGTGGCGGACACCCACTGTCCGGTCG CACCCTCGTGTTCGTGATTGACCTTCTCAACGTCGGCTAG
Upstream 100 bases:
>100_bases TTTCGCTGTGTTGATACACCTCCTCGGCGGCGATCCGCAGCCGAGTTCACACATTAATATTCCGAGCAATTTGTACATCG ATCCAAGGAGTTAGAGATCC
Downstream 100 bases:
>100_bases TCGCACACAACAATAAGAAGCAACAATAACGCCCGTAGACAAATTCGCGATCTACGGGCGTTATGCATCAAATCACCGTC ACATCGTTAGATCAATGTGT
Product: putative FK506-binding protein
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MEKPQIQVPEGPAPEDIVIVDLIEGDGAEAQPGGLVEVHYVGVDFENGQEFDSSWDRGQSIEFPLSGLIAGWQEGIPGMK VGGRRQLTIPPEAAYGPAGGGHPLSGRTLVFVIDLLNVG
Sequences:
>Translated_119_residues MEKPQIQVPEGPAPEDIVIVDLIEGDGAEAQPGGLVEVHYVGVDFENGQEFDSSWDRGQSIEFPLSGLIAGWQEGIPGMK VGGRRQLTIPPEAAYGPAGGGHPLSGRTLVFVIDLLNVG >Mature_119_residues MEKPQIQVPEGPAPEDIVIVDLIEGDGAEAQPGGLVEVHYVGVDFENGQEFDSSWDRGQSIEFPLSGLIAGWQEGIPGMK VGGRRQLTIPPEAAYGPAGGGHPLSGRTLVFVIDLLNVG
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasm And Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Homo sapiens, GI17149836, Length=100, Percent_Identity=43, Blast_Score=65, Evalue=1e-11, Organism=Homo sapiens, GI4503725, Length=100, Percent_Identity=43, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI87082390, Length=98, Percent_Identity=44.8979591836735, Blast_Score=69, Evalue=6e-14, Organism=Escherichia coli, GI1789745, Length=96, Percent_Identity=45.8333333333333, Blast_Score=64, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71993519, Length=101, Percent_Identity=39.6039603960396, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320727, Length=94, Percent_Identity=45.7446808510638, Blast_Score=70, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6324194, Length=106, Percent_Identity=46.2264150943396, Blast_Score=69, Evalue=2e-13, Organism=Drosophila melanogaster, GI24647110, Length=125, Percent_Identity=41.6, Blast_Score=75, Evalue=7e-15, Organism=Drosophila melanogaster, GI281363946, Length=94, Percent_Identity=39.3617021276596, Blast_Score=75, Evalue=8e-15, Organism=Drosophila melanogaster, GI17352457, Length=94, Percent_Identity=39.3617021276596, Blast_Score=75, Evalue=8e-15, Organism=Drosophila melanogaster, GI21356629, Length=76, Percent_Identity=46.0526315789474, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 12546; Mature: 12546
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKPQIQVPEGPAPEDIVIVDLIEGDGAEAQPGGLVEVHYVGVDFENGQEFDSSWDRGQS CCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCE IEFPLSGLIAGWQEGIPGMKVGGRRQLTIPPEAAYGPAGGGHPLSGRTLVFVIDLLNVG EECCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MEKPQIQVPEGPAPEDIVIVDLIEGDGAEAQPGGLVEVHYVGVDFENGQEFDSSWDRGQS CCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCE IEFPLSGLIAGWQEGIPGMKVGGRRQLTIPPEAAYGPAGGGHPLSGRTLVFVIDLLNVG EECCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7522844; 12948626 [H]