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The map label for this gene is yjfH [C]

Identifier: 38233380

GI number: 38233380

Start: 760677

End: 761573

Strand: Direct

Name: yjfH [C]

Synonym: DIP0781

Alternate gene names: 38233380

Gene position: 760677-761573 (Clockwise)

Preceding gene: 38233379

Following gene: 161598677

Centisome position: 30.57

GC content: 55.3

Gene sequence:

>897_bases
GTGTATTTAGCGGGCAGGGTCACTAACATAGTCACCGTGACTAGCCCTGACATTCATATTGAGCACCTAACCGACCCCCT
TGATCCACGATTGGATGATTTCCGTGATCTTAACCATTCGGATAATCGCCCCGATCTACCAGGAGGCAAAGGGCTCGTCA
TCGCCGAAGGGTCACTGGTTATCCCACGACTAGTCGACTCCCGTTTTCCAGTGCGCTGCCTTGTAGGCTTTCCCAACAAA
CTGGAAAAACTCCTCGCTAATGTGCACCTGCGTGCCCAGCTTGCCGACGTCCCCGTGTTCTCCGTGGACCGAGAAACTCT
TGCACAAGTAGCTGGCTTTGACATGCACCGTGGTCTTCTCGCCTCTGCAGACCGAGTAGCAGGAATGAGCATCGCGCAAG
CTATTGACGGCGCACGCACCGTGGTCATTCTCGAGGGTGTGGGCGATCACGAAAACATTGGATCGATGTTTAGAAACGCC
GCAGGTATGGGCGTCGATGCTGTGCTCTTTGGCAATGGCTGTGCGGATCCGCTCTATCGTCGTGTGGTTCGAGTATCGAT
GGGGCATGTCCTGCGCACACCATTCGCGCATTTTGGCGGAAAATCCACAACGTGGCAGCGCGAACTACAAGAACTTCGCG
ATGCTGGATTCCATATCGTATCGCTGACTCCGAATCCGCAAGCCGACCATCTAGCAGACGCCTTAGTTGATGCCAACGGT
GCGCCATATGCCAAGGTTGCACTACTCGTCGGGGCAGAAGGGCCAGGGCTTACCGAGCACGCTATGCGGGCAACGGATCA
ACGCGCGCGCATTCCCATGGCATCAGGTACTGATTCCCTCAACCTTGCAACCTCGGCAGCGATTGCTTTTTATGAGCGGG
ACCGCTCACTACGTTAA

Upstream 100 bases:

>100_bases
CTTGAACGCTATCGGTTCATAAAAAGAAACGCTTTCACCCGAACCCCCTTCTCAGCATGCGGTTGCAAACAGCCACGGAG
CGTACTGGGAAGGGGGATTC

Downstream 100 bases:

>100_bases
TCAGATGATGGCTTATCCGTGTGGCGTAGCGCATGGATAAATGCGCGGTACTTTTTCACCGCCACGTCGGACGCTACCGA
TAAGATTCGACGGGTGCGCC

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MYLAGRVTNIVTVTSPDIHIEHLTDPLDPRLDDFRDLNHSDNRPDLPGGKGLVIAEGSLVIPRLVDSRFPVRCLVGFPNK
LEKLLANVHLRAQLADVPVFSVDRETLAQVAGFDMHRGLLASADRVAGMSIAQAIDGARTVVILEGVGDHENIGSMFRNA
AGMGVDAVLFGNGCADPLYRRVVRVSMGHVLRTPFAHFGGKSTTWQRELQELRDAGFHIVSLTPNPQADHLADALVDANG
APYAKVALLVGAEGPGLTEHAMRATDQRARIPMASGTDSLNLATSAAIAFYERDRSLR

Sequences:

>Translated_298_residues
MYLAGRVTNIVTVTSPDIHIEHLTDPLDPRLDDFRDLNHSDNRPDLPGGKGLVIAEGSLVIPRLVDSRFPVRCLVGFPNK
LEKLLANVHLRAQLADVPVFSVDRETLAQVAGFDMHRGLLASADRVAGMSIAQAIDGARTVVILEGVGDHENIGSMFRNA
AGMGVDAVLFGNGCADPLYRRVVRVSMGHVLRTPFAHFGGKSTTWQRELQELRDAGFHIVSLTPNPQADHLADALVDANG
APYAKVALLVGAEGPGLTEHAMRATDQRARIPMASGTDSLNLATSAAIAFYERDRSLR
>Mature_298_residues
MYLAGRVTNIVTVTSPDIHIEHLTDPLDPRLDDFRDLNHSDNRPDLPGGKGLVIAEGSLVIPRLVDSRFPVRCLVGFPNK
LEKLLANVHLRAQLADVPVFSVDRETLAQVAGFDMHRGLLASADRVAGMSIAQAIDGARTVVILEGVGDHENIGSMFRNA
AGMGVDAVLFGNGCADPLYRRVVRVSMGHVLRTPFAHFGGKSTTWQRELQELRDAGFHIVSLTPNPQADHLADALVDANG
APYAKVALLVGAEGPGLTEHAMRATDQRARIPMASGTDSLNLATSAAIAFYERDRSLR

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 32136; Mature: 32136

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLAGRVTNIVTVTSPDIHIEHLTDPLDPRLDDFRDLNHSDNRPDLPGGKGLVIAEGSLV
CCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCEE
IPRLVDSRFPVRCLVGFPNKLEKLLANVHLRAQLADVPVFSVDRETLAQVAGFDMHRGLL
EHHHHCCCCCEEEEECCCHHHHHHHHHHHHEEEECCCCEEECCHHHHHHHHCCHHHHHHH
ASADRVAGMSIAQAIDGARTVVILEGVGDHENIGSMFRNAAGMGVDAVLFGNGCADPLYR
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
RVVRVSMGHVLRTPFAHFGGKSTTWQRELQELRDAGFHIVSLTPNPQADHLADALVDANG
HHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCC
APYAKVALLVGAEGPGLTEHAMRATDQRARIPMASGTDSLNLATSAAIAFYERDRSLR
CCCEEEEEEEECCCCCHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MYLAGRVTNIVTVTSPDIHIEHLTDPLDPRLDDFRDLNHSDNRPDLPGGKGLVIAEGSLV
CCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCEE
IPRLVDSRFPVRCLVGFPNKLEKLLANVHLRAQLADVPVFSVDRETLAQVAGFDMHRGLL
EHHHHCCCCCEEEEECCCHHHHHHHHHHHHEEEECCCCEEECCHHHHHHHHCCHHHHHHH
ASADRVAGMSIAQAIDGARTVVILEGVGDHENIGSMFRNAAGMGVDAVLFGNGCADPLYR
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
RVVRVSMGHVLRTPFAHFGGKSTTWQRELQELRDAGFHIVSLTPNPQADHLADALVDANG
HHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCC
APYAKVALLVGAEGPGLTEHAMRATDQRARIPMASGTDSLNLATSAAIAFYERDRSLR
CCCEEEEEEEECCCCCHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]