| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is glcK [H]
Identifier: 38233127
GI number: 38233127
Start: 486974
End: 487858
Strand: Direct
Name: glcK [H]
Synonym: DIP0518
Alternate gene names: 38233127
Gene position: 486974-487858 (Clockwise)
Preceding gene: 38233126
Following gene: 38233128
Centisome position: 19.57
GC content: 61.47
Gene sequence:
>885_bases ATGACACACGCACTCGGTGTCGACATCGGCGGCACTAAAATCGCAGTCGGAATCGTAGACAGCACGGACCCCACCACCGT AATCAGCCGACACATCGTCCCCACACCCGACCACGACGTGATTGACCGCGTACGCGACGCGATCGCCCACATCATCACCC CAGAAGTAACCAGCATTGGCATCGGCGCGCCGGGCGTGATCGACGAAACCACAGGAGTAGTTGTCTCCTCCGGTCCCACC ATGCAAGGCTGGGCTGGCACACGCATTGCGGATACTATCGCCGCGGAATTTTCGCTACCCGTCGCCGTGCATAACGACGT CCGCGTCATGGGGCTCGGCGAATCCATCTACGGCGCCGGACGCGACTACACCAACGTACTCTTTGTCAGCCTTGGGACAG GTGTCGGCGGCGCCATTGTTCGCGACGGACGCCTCGTAGCATCCCCGCACCACACTGCAGGCGAACTTCGGGCACTCATC GGCAGGCTTCCCGACGGCCGCGCAGACCTCCTAGAAAATTTCGCCGCAGGACCCGGCTTGGCACAAAGATTCGGTGAACG CTACCCCGAACACGCAGGCCGTGACCTGCGATTCATCATGGAGCTCTACCATGCAGGAGACACCCACGCCCGCGACTACA TCACCGCAACACTTGCAGCAGCAGGCGAAACCATCGCAGGATTCGCCAGCGCCATCGACGTAGACGCCATCATCATCGGT GGCGGAGTAGGCAACATCGGCGACGCCATCATCAAACCATTTGCCCACGGATTCGCAGCCCACGCCATTCCACCGCTGGA CACGATCCCCATCCGGCAAGCACAACTTGGCACCGACGCACCGATCGTCGGCGCAGCACACCTTGGCCACAGCGCCATCG AATAA
Upstream 100 bases:
>100_bases ACGAGCACTATCAGCCACTGCTCAGCATCCTAGAAAAGAACCGTCAATACGTCGAACAAACAGAGCACGCAGTTGAATCC CAGAAAGGCACCCTTCACCT
Downstream 100 bases:
>100_bases CACGCAATAACTATTGAAGGAGAAAACCATGGACCGTAACGAATTTATCGACCAAGTACGTGGCAGCCTGATCGTCTCAG CACAAGCCCCAACAGGGCAC
Product: putative regulatory protein sugar kinase
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTHALGVDIGGTKIAVGIVDSTDPTTVISRHIVPTPDHDVIDRVRDAIAHIITPEVTSIGIGAPGVIDETTGVVVSSGPT MQGWAGTRIADTIAAEFSLPVAVHNDVRVMGLGESIYGAGRDYTNVLFVSLGTGVGGAIVRDGRLVASPHHTAGELRALI GRLPDGRADLLENFAAGPGLAQRFGERYPEHAGRDLRFIMELYHAGDTHARDYITATLAAAGETIAGFASAIDVDAIIIG GGVGNIGDAIIKPFAHGFAAHAIPPLDTIPIRQAQLGTDAPIVGAAHLGHSAIE
Sequences:
>Translated_294_residues MTHALGVDIGGTKIAVGIVDSTDPTTVISRHIVPTPDHDVIDRVRDAIAHIITPEVTSIGIGAPGVIDETTGVVVSSGPT MQGWAGTRIADTIAAEFSLPVAVHNDVRVMGLGESIYGAGRDYTNVLFVSLGTGVGGAIVRDGRLVASPHHTAGELRALI GRLPDGRADLLENFAAGPGLAQRFGERYPEHAGRDLRFIMELYHAGDTHARDYITATLAAAGETIAGFASAIDVDAIIIG GGVGNIGDAIIKPFAHGFAAHAIPPLDTIPIRQAQLGTDAPIVGAAHLGHSAIE >Mature_293_residues THALGVDIGGTKIAVGIVDSTDPTTVISRHIVPTPDHDVIDRVRDAIAHIITPEVTSIGIGAPGVIDETTGVVVSSGPTM QGWAGTRIADTIAAEFSLPVAVHNDVRVMGLGESIYGAGRDYTNVLFVSLGTGVGGAIVRDGRLVASPHHTAGELRALIG RLPDGRADLLENFAAGPGLAQRFGERYPEHAGRDLRFIMELYHAGDTHARDYITATLAAAGETIAGFASAIDVDAIIIGG GVGNIGDAIIKPFAHGFAAHAIPPLDTIPIRQAQLGTDAPIVGAAHLGHSAIE
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Escherichia coli, GI1787363, Length=304, Percent_Identity=27.3026315789474, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87081733, Length=315, Percent_Identity=26.3492063492064, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786891, Length=296, Percent_Identity=21.6216216216216, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 30317; Mature: 30186
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHALGVDIGGTKIAVGIVDSTDPTTVISRHIVPTPDHDVIDRVRDAIAHIITPEVTSIG CCCEEEECCCCCEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEC IGAPGVIDETTGVVVSSGPTMQGWAGTRIADTIAAEFSLPVAVHNDVRVMGLGESIYGAG CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCEEEEEECHHHHCCC RDYTNVLFVSLGTGVGGAIVRDGRLVASPHHTAGELRALIGRLPDGRADLLENFAAGPGL CCCCEEEEEEECCCCCCEEEECCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCH AQRFGERYPEHAGRDLRFIMELYHAGDTHARDYITATLAAAGETIAGFASAIDVDAIIIG HHHHHHHCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCEEEEEEE GGVGNIGDAIIKPFAHGFAAHAIPPLDTIPIRQAQLGTDAPIVGAAHLGHSAIE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEHHHCCHHCCC >Mature Secondary Structure THALGVDIGGTKIAVGIVDSTDPTTVISRHIVPTPDHDVIDRVRDAIAHIITPEVTSIG CCEEEECCCCCEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEC IGAPGVIDETTGVVVSSGPTMQGWAGTRIADTIAAEFSLPVAVHNDVRVMGLGESIYGAG CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCEEEEEECHHHHCCC RDYTNVLFVSLGTGVGGAIVRDGRLVASPHHTAGELRALIGRLPDGRADLLENFAAGPGL CCCCEEEEEEECCCCCCEEEECCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCH AQRFGERYPEHAGRDLRFIMELYHAGDTHARDYITATLAAAGETIAGFASAIDVDAIIIG HHHHHHHCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCEEEEEEE GGVGNIGDAIIKPFAHGFAAHAIPPLDTIPIRQAQLGTDAPIVGAAHLGHSAIE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]