| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is tgt [H]
Identifier: 38232874
GI number: 38232874
Start: 214616
End: 215908
Strand: Direct
Name: tgt [H]
Synonym: DIP0251
Alternate gene names: 38232874
Gene position: 214616-215908 (Clockwise)
Preceding gene: 38232873
Following gene: 38232875
Centisome position: 8.62
GC content: 60.09
Gene sequence:
>1293_bases ATGACTGACACGACTTTTGAGCTTCGTACCGAGCTGGACGACGCGCCAGGCCGCCACGGCCGAACTGGTGTAATCCATAC CCCTCATGGTGACATCAACACGCCGGCGTTCATCCCTGTGGCCACCAAGGCGACGGTGAAAACCCTCACCCCACAGCAAA TTCGTGACACTGGCGCCCAGGCGATCCTCTCCAACGCCTACCACCTCTACTTGCAGCCGGGCCCCGATATTGTCGATGAA GCCGGCGGTGTATCCAAGTTCGAGAACTGGCACGGCCCCACCTACACCGACTCCGGCGGATTCCAGGTGATGAGCCTTGG TGTTGGCTTTAAAAAGGTGCTCGCTATGGATACCGCGGGGCTTGTAGAAGGCGACATCCGCGCGCCTAAAAAAGATCGCT ACGCGCAGGTTGATGAAGACGGCGTGGACTTCCGCAGCGTTATCGACGGCTCCCGCCACCGCTTCACCCCAGAAGTCAGC ATGCAAATCCAGCACCGGCTGGGCGCCGACATCATCTTCGCTTTCGACGAGCTGACCACCCTCGTGGACACCCGCCAGTA CCAAGAAAGCTCCGTCGAACGCACCCACCGCTGGGCACGCCGCTGCCTCATCGAACACGACCGCCTCACCCGCGAGCGCG AAGGAAAACCACTGCAATCCCTGTGGGGCGTTGTCCAAGGCGCCCAGTACGAGGATCTGCGCAGACAAGCAGTCCGTGGC CTGCTTGACCTAGACAAAGAGGCAGAAGATAACGGACGACGCGGCTTCGGTGGCTTCGGCATCGGTGGCGCATTAGAAAA GGAAAACCTAGGAACCATCGTAGGCTGGGTCTGCGACGAAATCCCGCAGCACAAACCACGCCACCTACTGGGAATCAGCG AACCAGACGACCTCTTTACCGCCATCGAAGCAGGTGCCGACACCTTCGACTGTGTTGCGCCGACGCGCCTCGGCCGTCGC GGCGGCGTGTACACCCTCGACGGGCGCGTGAACCTCACCGCAGCCCGCTTCAAACGCGACTTCCGTCAAGTAGACGAGGA GTTCGGCGGCCCTATCGCCGAGTACTCCCGCGCCTACATTCACCACCTGTTCAAGGCCAAGGAATTCCTCGGTGGAACAT TGTGCACAATGCATAACGTGGCCTTTATGATCCAGCTGGTAGACAACATTCGCAGCGCTATCAACAACGGCGACTTTGAA GCCTACCGCGATGAATTCCTCGGCCGCTACTACGCAAGCAAAGGAGGCCCAGCAGCAGCTGGGCGCTCCGGAGGGATGAT CTACGGGGTTTAG
Upstream 100 bases:
>100_bases ATCACAAGAGCTCTGTGGCTATGAAACGTAGCGCAAGCACCAACTACTGTTTGTTCCCCCAAAGTGCCTGTCCACGTGCA ACAAGCTAGAATTTCTCTCT
Downstream 100 bases:
>100_bases CGCATAAGCATGGGTACTTTTCAGGGAGCAGGGCGCTATGCGCCAAGTCCAAGCGGGGATCTTCACTTTGGCAACGTGCG CACCGCTGTGTTGGCGTGGC
Product: putative tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MTDTTFELRTELDDAPGRHGRTGVIHTPHGDINTPAFIPVATKATVKTLTPQQIRDTGAQAILSNAYHLYLQPGPDIVDE AGGVSKFENWHGPTYTDSGGFQVMSLGVGFKKVLAMDTAGLVEGDIRAPKKDRYAQVDEDGVDFRSVIDGSRHRFTPEVS MQIQHRLGADIIFAFDELTTLVDTRQYQESSVERTHRWARRCLIEHDRLTREREGKPLQSLWGVVQGAQYEDLRRQAVRG LLDLDKEAEDNGRRGFGGFGIGGALEKENLGTIVGWVCDEIPQHKPRHLLGISEPDDLFTAIEAGADTFDCVAPTRLGRR GGVYTLDGRVNLTAARFKRDFRQVDEEFGGPIAEYSRAYIHHLFKAKEFLGGTLCTMHNVAFMIQLVDNIRSAINNGDFE AYRDEFLGRYYASKGGPAAAGRSGGMIYGV
Sequences:
>Translated_430_residues MTDTTFELRTELDDAPGRHGRTGVIHTPHGDINTPAFIPVATKATVKTLTPQQIRDTGAQAILSNAYHLYLQPGPDIVDE AGGVSKFENWHGPTYTDSGGFQVMSLGVGFKKVLAMDTAGLVEGDIRAPKKDRYAQVDEDGVDFRSVIDGSRHRFTPEVS MQIQHRLGADIIFAFDELTTLVDTRQYQESSVERTHRWARRCLIEHDRLTREREGKPLQSLWGVVQGAQYEDLRRQAVRG LLDLDKEAEDNGRRGFGGFGIGGALEKENLGTIVGWVCDEIPQHKPRHLLGISEPDDLFTAIEAGADTFDCVAPTRLGRR GGVYTLDGRVNLTAARFKRDFRQVDEEFGGPIAEYSRAYIHHLFKAKEFLGGTLCTMHNVAFMIQLVDNIRSAINNGDFE AYRDEFLGRYYASKGGPAAAGRSGGMIYGV >Mature_429_residues TDTTFELRTELDDAPGRHGRTGVIHTPHGDINTPAFIPVATKATVKTLTPQQIRDTGAQAILSNAYHLYLQPGPDIVDEA GGVSKFENWHGPTYTDSGGFQVMSLGVGFKKVLAMDTAGLVEGDIRAPKKDRYAQVDEDGVDFRSVIDGSRHRFTPEVSM QIQHRLGADIIFAFDELTTLVDTRQYQESSVERTHRWARRCLIEHDRLTREREGKPLQSLWGVVQGAQYEDLRRQAVRGL LDLDKEAEDNGRRGFGGFGIGGALEKENLGTIVGWVCDEIPQHKPRHLLGISEPDDLFTAIEAGADTFDCVAPTRLGRRG GVYTLDGRVNLTAARFKRDFRQVDEEFGGPIAEYSRAYIHHLFKAKEFLGGTLCTMHNVAFMIQLVDNIRSAINNGDFEA YRDEFLGRYYASKGGPAAAGRSGGMIYGV
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=396, Percent_Identity=32.8282828282828, Blast_Score=227, Evalue=1e-59, Organism=Escherichia coli, GI1786607, Length=406, Percent_Identity=38.1773399014778, Blast_Score=266, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17544680, Length=394, Percent_Identity=32.2335025380711, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI19920510, Length=400, Percent_Identity=32.75, Blast_Score=234, Evalue=9e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 47676; Mature: 47545
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTTFELRTELDDAPGRHGRTGVIHTPHGDINTPAFIPVATKATVKTLTPQQIRDTGAQ CCCCCCHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHH AILSNAYHLYLQPGPDIVDEAGGVSKFENWHGPTYTDSGGFQVMSLGVGFKKVLAMDTAG HHHCCCEEEEECCCCCHHHCCCCCHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCC LVEGDIRAPKKDRYAQVDEDGVDFRSVIDGSRHRFTPEVSMQIQHRLGADIIFAFDELTT CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHH LVDTRQYQESSVERTHRWARRCLIEHDRLTREREGKPLQSLWGVVQGAQYEDLRRQAVRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH LLDLDKEAEDNGRRGFGGFGIGGALEKENLGTIVGWVCDEIPQHKPRHLLGISEPDDLFT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCHHHHH AIEAGADTFDCVAPTRLGRRGGVYTLDGRVNLTAARFKRDFRQVDEEFGGPIAEYSRAYI HHHCCCCCCHHCCCHHCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHH HHLFKAKEFLGGTLCTMHNVAFMIQLVDNIRSAINNGDFEAYRDEFLGRYYASKGGPAAA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC GRSGGMIYGV CCCCCEEEEC >Mature Secondary Structure TDTTFELRTELDDAPGRHGRTGVIHTPHGDINTPAFIPVATKATVKTLTPQQIRDTGAQ CCCCCHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHH AILSNAYHLYLQPGPDIVDEAGGVSKFENWHGPTYTDSGGFQVMSLGVGFKKVLAMDTAG HHHCCCEEEEECCCCCHHHCCCCCHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCC LVEGDIRAPKKDRYAQVDEDGVDFRSVIDGSRHRFTPEVSMQIQHRLGADIIFAFDELTT CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHH LVDTRQYQESSVERTHRWARRCLIEHDRLTREREGKPLQSLWGVVQGAQYEDLRRQAVRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH LLDLDKEAEDNGRRGFGGFGIGGALEKENLGTIVGWVCDEIPQHKPRHLLGISEPDDLFT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCHHHHH AIEAGADTFDCVAPTRLGRRGGVYTLDGRVNLTAARFKRDFRQVDEEFGGPIAEYSRAYI HHHCCCCCCHHCCCHHCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHH HHLFKAKEFLGGTLCTMHNVAFMIQLVDNIRSAINNGDFEAYRDEFLGRYYASKGGPAAA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC GRSGGMIYGV CCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA