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The map label for this gene is ydfJ [H]

Identifier: 38232873

GI number: 38232873

Start: 211613

End: 213949

Strand: Direct

Name: ydfJ [H]

Synonym: DIP0250

Alternate gene names: 38232873

Gene position: 211613-213949 (Clockwise)

Preceding gene: 38232872

Following gene: 38232874

Centisome position: 8.5

GC content: 57.12

Gene sequence:

>2337_bases
GTGGCCGCCTTTTTGTATCGTGTTGGCGCGTGGTCGTTTCGGGCCAAGTGGTTTGTGATTGTCACGTGGCTTGTTGTGCT
TGCGGCTGTAGGCGGTGCTGCCGCTGCGTTTCAAGCGGGCTTTAATGATCTATTTACGATCAATAACACTCCGGCGAAGA
CGGCGACGGAGATTTATCTGGAAAACTTCCCTGAACAGCGCAATCCGTTGAAGAGTACGGGTGTGAATATCGTGTTTAAA
GCGCCGGAGGGGCACACGCTGGCTGAGCCGGAGAACAAGGCTGCCATGGATAGTGTGGTGCAGGCGATCCAAGATAATCT
TGAGGGCCTGACTAATACGCAGCGTTTTGGTAATCCTGTGGAATTGAATCCGAAGTTGCAGCAGGGTGTTATCGATTTGA
TGACGCAGCGTGGTGTGCCGGAGGAAAACGCGCGTGCCGACGCAGCCAATTTGAGCCTGATTACCCCCGATGAGACGATC
GGGTACACCACCTTCGATATTGATGTGCCTATGCCTGCGGACGTCAGCGATGCGCAGCGCCAGGCGATCACCGATGCCAT
GAACTTAGGCCGCGAGAAGGGCCTGACAGTTGAGGCCGGTGGTGCTGGTTTTGGTGATCCGATCGTGATTGAAGAAACTT
CAGAGATCATTGGTGTGGCCATCGCGGCGATCATTTTGATCTTCACATTTGGTTCCTTGGTGGCCGCTGGACTCCCACTG
CTCATTGCTGTTATCGGTGTAGGTATTGGTTCGCTATCGATCACGCTGGCTACGGCATGGGTATCGCTGAATAACGTCAC
CCCAGTGCTGGCGGTGATGTTGGGCCTGGCGGTGGGTATCGACTACTCACTGTTTATCATGTTCCGCTACCGCCGCGAGC
TGCTGCACCTAGACAAGGAACAAGCCGCCGGCATGGCGGTGGGCACTGCGGGATCTGCGGTGGTGTTCGCGGGCCTGACG
GTGATCATCGCGCTGGTTGCTTTGGCAGTGGCTAATATTCCATTCCTGACTTACATGGGGCTTGCTGCAGCGTTCACGGT
GTTCATTGCGGTGCTGATCGCACTGACGATGGTGCCGGCGCTGTTGGGGGCGTTGGGGGATAAGGCCTTTGCGGTGCGGT
TGCGCCGGAAGCGGCGGACGTCGCCAGCCCGTACGTTGGGGCGCAAGTGGGGGGAGTTGGTGCACCGCGCGCCGGGTGTG
GTGATTGCGGTGAGCGTCGTAACGCTGGGTGCATTGACGCTGCCTGCGCTGCAATTGCACTTGTCGTTACCCTCCGATAC
GCAGGCGAGTTATAGCTCTACGCAGCGCAAACAGGCTGAGATCATGGCGGAGGGGTTTGGCCCTGGTATTAATTCGCCAT
TTTTGGTGGTGGCGGATGCGCATTCGGTGGATGAGAACGCGGAGATTTTGGAGCCGCTGATCCGCGCGCAGAATCCGGCG
CCGGGGGAGCGCAAGCAGGCGGCAGCGAATGCGGCGTATCAGTACATTATTCAGAAGTATTCGGTTACTCCGGATGTGAA
GCATGTGCAGATCGTGGGATTGTCGAAGGACGGCTTGGCGGCGCAGTTGTTGCTTACGCCGGAGTCGTCGCCAGAAGACG
ATGTGACCAAGCAGCTTATCGACGCCCTCCTGATCAAACAGGACGAGGTGAACAACGCGACCGGTATTCGTTCCGGTATT
ACGGGCCTGATCCCCGTGCAGCAGGATGTGACCAACCGTCTGGCGGGCGTGATGCCGCTATACCTTGGCATAGTGGTGGG
CCTTGCGGTGTTATTGCTGATGATCGTGTTCCGCAGCATTTGGGTGCCGGTGGTCGCTGGCGTGGGCTTTTTGCTCTCTG
TGGGCGCGGCGTTCGGCGTGACTGTGCTGTTTTGGCAAGAGGGTCTGTGGGGGCTTGTGGACACTCCCAGCCCGATCATT
GCGTTTATGCCGATCTTCCTTATTGGCGTGTGCTTTGGCCTTGCTATGGACTATCAGGTGTTCTTGGTATCCGCGATGCG
GGAGCGTTTCGTGCATGGGCGTATCGACGCCACCAGCCGCTACAACGCCATCGAAGAATCGATCGTAGAGGGCTTCGCCT
CAAGTGTTCGTGTGGTCACTGCTGCCGCGCTGATCATGATTGCGGTGTTTGTGGCCTTCATTGGGCAGCCGATTCCGTTT
ATTAAAATCTTCGGTTTTGCCTTGGGCGCTGGGGTACTTTTCGACGCCTTCTTTATCCGCATGGCGTTCGTTCCGGCAGC
AATGTTCCTTCTTGGACGGCAAACGTGGTACATGCCACATTGGCTGGATAAAGTGCTGCCTCGTCTCGATGTAGAGGGCA
CGTCGCTGGAGCGTTAA

Upstream 100 bases:

>100_bases
CCCCGCGAACCCGCGGAGCCCCCAAAACCAGCAAATCCTAATCAAGGTCTACACTGGAAGACTATTTCTCGTTCCCTTGT
GGTTTAAGGAGATCATCGTC

Downstream 100 bases:

>100_bases
CCGAGATCGCAGGCGCTGTGGCATGGGCTGTAGGTAGCTGAGAACTAGCCCGCCAAGCCATCGGTGCCCGCATGAGGGGC
AAGATCTTTTCCTCGTCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 778; Mature: 777

Protein sequence:

>778_residues
MAAFLYRVGAWSFRAKWFVIVTWLVVLAAVGGAAAAFQAGFNDLFTINNTPAKTATEIYLENFPEQRNPLKSTGVNIVFK
APEGHTLAEPENKAAMDSVVQAIQDNLEGLTNTQRFGNPVELNPKLQQGVIDLMTQRGVPEENARADAANLSLITPDETI
GYTTFDIDVPMPADVSDAQRQAITDAMNLGREKGLTVEAGGAGFGDPIVIEETSEIIGVAIAAIILIFTFGSLVAAGLPL
LIAVIGVGIGSLSITLATAWVSLNNVTPVLAVMLGLAVGIDYSLFIMFRYRRELLHLDKEQAAGMAVGTAGSAVVFAGLT
VIIALVALAVANIPFLTYMGLAAAFTVFIAVLIALTMVPALLGALGDKAFAVRLRRKRRTSPARTLGRKWGELVHRAPGV
VIAVSVVTLGALTLPALQLHLSLPSDTQASYSSTQRKQAEIMAEGFGPGINSPFLVVADAHSVDENAEILEPLIRAQNPA
PGERKQAAANAAYQYIIQKYSVTPDVKHVQIVGLSKDGLAAQLLLTPESSPEDDVTKQLIDALLIKQDEVNNATGIRSGI
TGLIPVQQDVTNRLAGVMPLYLGIVVGLAVLLLMIVFRSIWVPVVAGVGFLLSVGAAFGVTVLFWQEGLWGLVDTPSPII
AFMPIFLIGVCFGLAMDYQVFLVSAMRERFVHGRIDATSRYNAIEESIVEGFASSVRVVTAAALIMIAVFVAFIGQPIPF
IKIFGFALGAGVLFDAFFIRMAFVPAAMFLLGRQTWYMPHWLDKVLPRLDVEGTSLER

Sequences:

>Translated_778_residues
MAAFLYRVGAWSFRAKWFVIVTWLVVLAAVGGAAAAFQAGFNDLFTINNTPAKTATEIYLENFPEQRNPLKSTGVNIVFK
APEGHTLAEPENKAAMDSVVQAIQDNLEGLTNTQRFGNPVELNPKLQQGVIDLMTQRGVPEENARADAANLSLITPDETI
GYTTFDIDVPMPADVSDAQRQAITDAMNLGREKGLTVEAGGAGFGDPIVIEETSEIIGVAIAAIILIFTFGSLVAAGLPL
LIAVIGVGIGSLSITLATAWVSLNNVTPVLAVMLGLAVGIDYSLFIMFRYRRELLHLDKEQAAGMAVGTAGSAVVFAGLT
VIIALVALAVANIPFLTYMGLAAAFTVFIAVLIALTMVPALLGALGDKAFAVRLRRKRRTSPARTLGRKWGELVHRAPGV
VIAVSVVTLGALTLPALQLHLSLPSDTQASYSSTQRKQAEIMAEGFGPGINSPFLVVADAHSVDENAEILEPLIRAQNPA
PGERKQAAANAAYQYIIQKYSVTPDVKHVQIVGLSKDGLAAQLLLTPESSPEDDVTKQLIDALLIKQDEVNNATGIRSGI
TGLIPVQQDVTNRLAGVMPLYLGIVVGLAVLLLMIVFRSIWVPVVAGVGFLLSVGAAFGVTVLFWQEGLWGLVDTPSPII
AFMPIFLIGVCFGLAMDYQVFLVSAMRERFVHGRIDATSRYNAIEESIVEGFASSVRVVTAAALIMIAVFVAFIGQPIPF
IKIFGFALGAGVLFDAFFIRMAFVPAAMFLLGRQTWYMPHWLDKVLPRLDVEGTSLER
>Mature_777_residues
AAFLYRVGAWSFRAKWFVIVTWLVVLAAVGGAAAAFQAGFNDLFTINNTPAKTATEIYLENFPEQRNPLKSTGVNIVFKA
PEGHTLAEPENKAAMDSVVQAIQDNLEGLTNTQRFGNPVELNPKLQQGVIDLMTQRGVPEENARADAANLSLITPDETIG
YTTFDIDVPMPADVSDAQRQAITDAMNLGREKGLTVEAGGAGFGDPIVIEETSEIIGVAIAAIILIFTFGSLVAAGLPLL
IAVIGVGIGSLSITLATAWVSLNNVTPVLAVMLGLAVGIDYSLFIMFRYRRELLHLDKEQAAGMAVGTAGSAVVFAGLTV
IIALVALAVANIPFLTYMGLAAAFTVFIAVLIALTMVPALLGALGDKAFAVRLRRKRRTSPARTLGRKWGELVHRAPGVV
IAVSVVTLGALTLPALQLHLSLPSDTQASYSSTQRKQAEIMAEGFGPGINSPFLVVADAHSVDENAEILEPLIRAQNPAP
GERKQAAANAAYQYIIQKYSVTPDVKHVQIVGLSKDGLAAQLLLTPESSPEDDVTKQLIDALLIKQDEVNNATGIRSGIT
GLIPVQQDVTNRLAGVMPLYLGIVVGLAVLLLMIVFRSIWVPVVAGVGFLLSVGAAFGVTVLFWQEGLWGLVDTPSPIIA
FMPIFLIGVCFGLAMDYQVFLVSAMRERFVHGRIDATSRYNAIEESIVEGFASSVRVVTAAALIMIAVFVAFIGQPIPFI
KIFGFALGAGVLFDAFFIRMAFVPAAMFLLGRQTWYMPHWLDKVLPRLDVEGTSLER

Specific function: Unknown

COG id: COG2409

COG function: function code R; Predicted drug exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 83266; Mature: 83135

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFLYRVGAWSFRAKWFVIVTWLVVLAAVGGAAAAFQAGFNDLFTINNTPAKTATEIYL
CCCHHEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCHHHHHHHH
ENFPEQRNPLKSTGVNIVFKAPEGHTLAEPENKAAMDSVVQAIQDNLEGLTNTQRFGNPV
HHCCCCCCCHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
ELNPKLQQGVIDLMTQRGVPEENARADAANLSLITPDETIGYTTFDIDVPMPADVSDAQR
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCHHHH
QAITDAMNLGREKGLTVEAGGAGFGDPIVIEETSEIIGVAIAAIILIFTFGSLVAAGLPL
HHHHHHHHCCHHCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAVIGVGIGSLSITLATAWVSLNNVTPVLAVMLGLAVGIDYSLFIMFRYRRELLHLDKE
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH
QAAGMAVGTAGSAVVFAGLTVIIALVALAVANIPFLTYMGLAAAFTVFIAVLIALTMVPA
HHCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGALGDKAFAVRLRRKRRTSPARTLGRKWGELVHRAPGVVIAVSVVTLGALTLPALQLH
HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHEE
LSLPSDTQASYSSTQRKQAEIMAEGFGPGINSPFLVVADAHSVDENAEILEPLIRAQNPA
EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCC
PGERKQAAANAAYQYIIQKYSVTPDVKHVQIVGLSKDGLAAQLLLTPESSPEDDVTKQLI
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHH
DALLIKQDEVNNATGIRSGITGLIPVQQDVTNRLAGVMPLYLGIVVGLAVLLLMIVFRSI
HHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVPVVAGVGFLLSVGAAFGVTVLFWQEGLWGLVDTPSPIIAFMPIFLIGVCFGLAMDYQV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FLVSAMRERFVHGRIDATSRYNAIEESIVEGFASSVRVVTAAALIMIAVFVAFIGQPIPF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IKIFGFALGAGVLFDAFFIRMAFVPAAMFLLGRQTWYMPHWLDKVLPRLDVEGTSLER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AAFLYRVGAWSFRAKWFVIVTWLVVLAAVGGAAAAFQAGFNDLFTINNTPAKTATEIYL
CCHHEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCHHHHHHHH
ENFPEQRNPLKSTGVNIVFKAPEGHTLAEPENKAAMDSVVQAIQDNLEGLTNTQRFGNPV
HHCCCCCCCHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
ELNPKLQQGVIDLMTQRGVPEENARADAANLSLITPDETIGYTTFDIDVPMPADVSDAQR
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCHHHH
QAITDAMNLGREKGLTVEAGGAGFGDPIVIEETSEIIGVAIAAIILIFTFGSLVAAGLPL
HHHHHHHHCCHHCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAVIGVGIGSLSITLATAWVSLNNVTPVLAVMLGLAVGIDYSLFIMFRYRRELLHLDKE
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH
QAAGMAVGTAGSAVVFAGLTVIIALVALAVANIPFLTYMGLAAAFTVFIAVLIALTMVPA
HHCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGALGDKAFAVRLRRKRRTSPARTLGRKWGELVHRAPGVVIAVSVVTLGALTLPALQLH
HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHEE
LSLPSDTQASYSSTQRKQAEIMAEGFGPGINSPFLVVADAHSVDENAEILEPLIRAQNPA
EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCC
PGERKQAAANAAYQYIIQKYSVTPDVKHVQIVGLSKDGLAAQLLLTPESSPEDDVTKQLI
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHH
DALLIKQDEVNNATGIRSGITGLIPVQQDVTNRLAGVMPLYLGIVVGLAVLLLMIVFRSI
HHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVPVVAGVGFLLSVGAAFGVTVLFWQEGLWGLVDTPSPIIAFMPIFLIGVCFGLAMDYQV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FLVSAMRERFVHGRIDATSRYNAIEESIVEGFASSVRVVTAAALIMIAVFVAFIGQPIPF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IKIFGFALGAGVLFDAFFIRMAFVPAAMFLLGRQTWYMPHWLDKVLPRLDVEGTSLER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]