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The map label for this gene is yraN [C]

Identifier: 21675070

GI number: 21675070

Start: 2126594

End: 2126983

Strand: Direct

Name: yraN [C]

Synonym: CT2262

Alternate gene names: 21675070

Gene position: 2126594-2126983 (Clockwise)

Preceding gene: 21675069

Following gene: 21675071

Centisome position: 98.68

GC content: 58.46

Gene sequence:

>390_bases
ATGAATGCCCCTCAATGGCTCGGCGCTGAAGGAGAAAAAATCGCCGCAAGACATCTGGCCGCAAAAGGCTACCGCATCGT
TGCCCGAAACTACCGCTTTCATCGCAATGAGATCGACATCATTGCCTTCGATGGCGAGGCGCTCTGCTTCATAGAGGTCA
AAACCAGAGCATCGCTCGGCAAAGGTCATCCAGCCGAATCAGTCACCCGAAGCAAGCAGAAGGAGATCGCGCGAGCCGCC
GCCGGCTATCTGGCGAGCCTCGACGACCCCTGGATCACCTGCCGTTTCGACGTCATCGCCGTGCTCGCGCTCAGCATCGA
CGAGCGCTCCATCCGCAAGTACGAGATCGAACACATCAAGGCCGCCTTCATGGTTGGCGACAAGGGCTGA

Upstream 100 bases:

>100_bases
CACGTCGAGGCAATCGCCCGGCACGGTCGCTGCGCCATCCACCGCCAAAGCTTCAAACTTCGGAAACTGGGAGAAAAGTA
AAAAACAAGGAACTGCCGTC

Downstream 100 bases:

>100_bases
AATAGCATATCAGCGGATTTTTTTTATCTTTGGGATCAAAGTTTTTACTGATTCATCACGCACGACGATCCCATGCAAGA
AACCGATATCCAGACCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MNAPQWLGAEGEKIAARHLAAKGYRIVARNYRFHRNEIDIIAFDGEALCFIEVKTRASLGKGHPAESVTRSKQKEIARAA
AGYLASLDDPWITCRFDVIAVLALSIDERSIRKYEIEHIKAAFMVGDKG

Sequences:

>Translated_129_residues
MNAPQWLGAEGEKIAARHLAAKGYRIVARNYRFHRNEIDIIAFDGEALCFIEVKTRASLGKGHPAESVTRSKQKEIARAA
AGYLASLDDPWITCRFDVIAVLALSIDERSIRKYEIEHIKAAFMVGDKG
>Mature_129_residues
MNAPQWLGAEGEKIAARHLAAKGYRIVARNYRFHRNEIDIIAFDGEALCFIEVKTRASLGKGHPAESVTRSKQKEIARAA
AGYLASLDDPWITCRFDVIAVLALSIDERSIRKYEIEHIKAAFMVGDKG

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=114, Percent_Identity=38.5964912280702, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2262_CHLTE (Q8KAA4)

Other databases:

- EMBL:   AE006470
- RefSeq:   NP_663135.1
- ProteinModelPortal:   Q8KAA4
- GeneID:   1007297
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT2262
- NMPDR:   fig|194439.1.peg.2229
- TIGR:   CT2262
- HOGENOM:   HBG710155
- OMA:   MAEHNEL
- ProtClustDB:   PRK12497
- BioCyc:   CTEP194439:CT_2262-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14387; Mature: 14387

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPQWLGAEGEKIAARHLAAKGYRIVARNYRFHRNEIDIIAFDGEALCFIEVKTRASLG
CCCCCCCCCCCCHHHHHHHHHCCEEEEEECCEEECCCEEEEEECCCEEEEEEEECCCCCC
KGHPAESVTRSKQKEIARAAAGYLASLDDPWITCRFDVIAVLALSIDERSIRKYEIEHIK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHE
AAFMVGDKG
EEEEECCCC
>Mature Secondary Structure
MNAPQWLGAEGEKIAARHLAAKGYRIVARNYRFHRNEIDIIAFDGEALCFIEVKTRASLG
CCCCCCCCCCCCHHHHHHHHHCCEEEEEECCEEECCCEEEEEECCCEEEEEEEECCCCCC
KGHPAESVTRSKQKEIARAAAGYLASLDDPWITCRFDVIAVLALSIDERSIRKYEIEHIK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHE
AAFMVGDKG
EEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901