| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is menC [H]
Identifier: 21674660
GI number: 21674660
Start: 1746847
End: 1747938
Strand: Direct
Name: menC [H]
Synonym: CT1847
Alternate gene names: 21674660
Gene position: 1746847-1747938 (Clockwise)
Preceding gene: 21674659
Following gene: 21674661
Centisome position: 81.06
GC content: 64.74
Gene sequence:
>1092_bases GTGAAGCCGCTTCATGCCGACATCTGCCGGTATGAAATGGATTTCACCGCGCCGGTCACCGTCCGAGGAGTGCTTCTCGC CAGACGCCAGGGGTTGCTCCTGCGCCTGAAAAGTGAGGGGGTGACAGCGTATGGCGAAGTCGCCCCCCTCATCGGTCTGC ACACGGAGTCACTCGACGAGGCCTTGCAGGCTCTTGCCACATTCATTCCCGAACTTTCACGACTCGACTGGAACGCATCC GATGGTCGGCAACGCCTGCTCGACGAGGCAGCGCTGCCACCGTCGGTGACGACCGGTATCGAGATGGCGCTCATCAACCT CGAAGCGACTGAGCGCAGCTCGCTTCCGTCTTTCACTGACGAATTCCCTCCAGCATCGAAAATCCCTGTCAACGCGCTGC TAGCTGGGGATCCGCAAGCCGTGCTCAACCGCGCAGCGAAGCGCTACGCCGAGGGATTCCGCGCCTTCAAGCTGAAGGTG CGCAAAGGAGAGCTCGACGGAGCCGTCGCCTGCATCCGCGCCCTGCACGAGGCTTTCGGCGACAAGGCGGAGCTGCGGCT CGACGCCAACCAGTCGCTCGAATTCGACGAGGCGGTCGCGTTCGGCAAAGCCCTGCCGCCGGGTTGCGTCGCCTACATCG AGGAGCCGCTGACCGATGCGGCGCTGATTTCCGACTTCCACGCCGCTACCGGTCTGCCGTCGGCGCTTGACGAGTCGCTC TGGCAGCGCCCGGAGCTGCTCGACGAGATCGGCCCCGACCCACTCGGCGCGCTCGTGCTCAAGCCGAACTGCATCGGCGG CATCGCGAAATCGCTCGACCTTGCGGCCAAAGCGCACCGGATGGGGTTGCAGGCGGTTTACAGCTCAGCTTTCGAGAGCA GCGTCAGCCTCGGGCTCTACGCGCTCATGGCCGCCGTCTCGTCGCCAGCTCCGGCGGCATCAGGTCTCGACACGGCGAGC TTTCTCGCCCGCGACCTCACCGCCACACCCTTCGCCACGCCGGACGGATTCGCCGATCCCGCAGCCGCATGGCGCGACAG CTTGCGCGTGAGACCCGACATGATCGAAACCGTCAAGTCATGGAGCTTGTAA
Upstream 100 bases:
>100_bases ACGCCACCCTGCTCTATTACATGAGCGAGGAGGGACAGGAGGGCCGCAACGCCTTCGTCGAGAAGCGCAAACCCGATTTC AGCAAGTTCCCGAAACGCCC
Downstream 100 bases:
>100_bases CCCAGGCCGCACAAACCTTCGGCGACCAACCCGCGCTCATCACCGACGAACGGCGCTGGAGCTTCGCCGACCTCGATGGC GACACGGCTCGCATCGCCAC
Product: O-succinylbenzoate-CoA synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKPLHADICRYEMDFTAPVTVRGVLLARRQGLLLRLKSEGVTAYGEVAPLIGLHTESLDEALQALATFIPELSRLDWNAS DGRQRLLDEAALPPSVTTGIEMALINLEATERSSLPSFTDEFPPASKIPVNALLAGDPQAVLNRAAKRYAEGFRAFKLKV RKGELDGAVACIRALHEAFGDKAELRLDANQSLEFDEAVAFGKALPPGCVAYIEEPLTDAALISDFHAATGLPSALDESL WQRPELLDEIGPDPLGALVLKPNCIGGIAKSLDLAAKAHRMGLQAVYSSAFESSVSLGLYALMAAVSSPAPAASGLDTAS FLARDLTATPFATPDGFADPAAAWRDSLRVRPDMIETVKSWSL
Sequences:
>Translated_363_residues MKPLHADICRYEMDFTAPVTVRGVLLARRQGLLLRLKSEGVTAYGEVAPLIGLHTESLDEALQALATFIPELSRLDWNAS DGRQRLLDEAALPPSVTTGIEMALINLEATERSSLPSFTDEFPPASKIPVNALLAGDPQAVLNRAAKRYAEGFRAFKLKV RKGELDGAVACIRALHEAFGDKAELRLDANQSLEFDEAVAFGKALPPGCVAYIEEPLTDAALISDFHAATGLPSALDESL WQRPELLDEIGPDPLGALVLKPNCIGGIAKSLDLAAKAHRMGLQAVYSSAFESSVSLGLYALMAAVSSPAPAASGLDTAS FLARDLTATPFATPDGFADPAAAWRDSLRVRPDMIETVKSWSL >Mature_363_residues MKPLHADICRYEMDFTAPVTVRGVLLARRQGLLLRLKSEGVTAYGEVAPLIGLHTESLDEALQALATFIPELSRLDWNAS DGRQRLLDEAALPPSVTTGIEMALINLEATERSSLPSFTDEFPPASKIPVNALLAGDPQAVLNRAAKRYAEGFRAFKLKV RKGELDGAVACIRALHEAFGDKAELRLDANQSLEFDEAVAFGKALPPGCVAYIEEPLTDAALISDFHAATGLPSALDESL WQRPELLDEIGPDPLGALVLKPNCIGGIAKSLDLAAKAHRMGLQAVYSSAFESSVSLGLYALMAAVSSPAPAASGLDTAS FLARDLTATPFATPDGFADPAAAWRDSLRVRPDMIETVKSWSL
Specific function: Converts SHCHC to OSB [H]
COG id: COG1441
COG function: function code H; O-succinylbenzoate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788596, Length=320, Percent_Identity=30, Blast_Score=99, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 38777; Mature: 38777
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00909 MR_MLE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLHADICRYEMDFTAPVTVRGVLLARRQGLLLRLKSEGVTAYGEVAPLIGLHTESLDE CCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHCCHHHHHH ALQALATFIPELSRLDWNASDGRQRLLDEAALPPSVTTGIEMALINLEATERSSLPSFTD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHCCCEEEEEEEEHHHCCCCCCCCC EFPPASKIPVNALLAGDPQAVLNRAAKRYAEGFRAFKLKVRKGELDGAVACIRALHEAFG CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHC DKAELRLDANQSLEFDEAVAFGKALPPGCVAYIEEPLTDAALISDFHAATGLPSALDESL CCEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHH WQRPELLDEIGPDPLGALVLKPNCIGGIAKSLDLAAKAHRMGLQAVYSSAFESSVSLGLY HCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMAAVSSPAPAASGLDTASFLARDLTATPFATPDGFADPAAAWRDSLRVRPDMIETVKS HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH WSL CCC >Mature Secondary Structure MKPLHADICRYEMDFTAPVTVRGVLLARRQGLLLRLKSEGVTAYGEVAPLIGLHTESLDE CCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHCCHHHHHH ALQALATFIPELSRLDWNASDGRQRLLDEAALPPSVTTGIEMALINLEATERSSLPSFTD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHCCCEEEEEEEEHHHCCCCCCCCC EFPPASKIPVNALLAGDPQAVLNRAAKRYAEGFRAFKLKVRKGELDGAVACIRALHEAFG CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHC DKAELRLDANQSLEFDEAVAFGKALPPGCVAYIEEPLTDAALISDFHAATGLPSALDESL CCEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHH WQRPELLDEIGPDPLGALVLKPNCIGGIAKSLDLAAKAHRMGLQAVYSSAFESSVSLGLY HCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMAAVSSPAPAASGLDTASFLARDLTATPFATPDGFADPAAAWRDSLRVRPDMIETVKS HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH WSL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA