| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is menB [H]
Identifier: 21674659
GI number: 21674659
Start: 1745969
End: 1746850
Strand: Direct
Name: menB [H]
Synonym: CT1846
Alternate gene names: 21674659
Gene position: 1745969-1746850 (Clockwise)
Preceding gene: 21674658
Following gene: 21674660
Centisome position: 81.02
GC content: 61.0
Gene sequence:
>882_bases TTGCCTGTAGAGCCGGGGCAACGCCGATTTTCATCAACTACCATCGAGATTTCAGATATGAGCACAGTCAACTGGATTAC AGCCGGAGAGTACTCCGACATTCTCTACCACAAGACCGAAGAAGGGATCGCCAAAATCACCATCAACCGACCGGAGCGGC GCAATGCGTTCCGCCCGCAGACGGTGGATCAGATGATCGAGGCGCTTCAGGATGCGCGTAACGACAGCCAGATCGGCGTC ATCATCCTGACCGGTGCGGGCGACCTCGCGTTCTGCTCCGGCGGTGACCAAAAGATTCGCGGCAACGCAGGATACGCCGA CGAAAAAGGCGTGAACAAGCTCAACGTGCTCGATTTCCAGCGCGACATCCGCACCTGCCCGAAGCCGATCATCGCAATGG TGGCGGGCTACGCCATCGGCGGAGGCCACGTGCTGCACATGCTCTGCGACCTCACCATCGCGGCGGAAAACGCCCGTTTC GGCCAGACCGGCCCACGCGTCGGCTCATTCGACGGCGGCTGGGGCGCGAGCTACATGGCGCGTCTGGTCGGTCAAAAAAA GGCCCGCGAAATCTGGTACCTCTGCCGCCAGTACAACGCGCAAGAGGCGCTCGACATGGGCTTGGTCAACACCGTCGTGC CACTCGAAAAGCTTGAAGAAGAGACCATCCAGTGGTGCCGCGAAATTCTCGCCAACTCGCCGCTCGCCATCCGCTGCCTC AAGGCCGCGCTCAACGCCGACTGCGACGGTCAGGCTGGGTTGCAGGAGCTTGCGGGCAACGCCACCCTGCTCTATTACAT GAGCGAGGAGGGACAGGAGGGCCGCAACGCCTTCGTCGAGAAGCGCAAACCCGATTTCAGCAAGTTCCCGAAACGCCCGT GA
Upstream 100 bases:
>100_bases GAAACGCATCCCCACAACAGCATTTCCCACGATGACCTGTAAGTCCCATTCCGCCGTCACGCCTCTCTAATCAACGGGGA TTGTTTATATTTCAGCTCTT
Downstream 100 bases:
>100_bases AGCCGCTTCATGCCGACATCTGCCGGTATGAAATGGATTTCACCGCGCCGGTCACCGTCCGAGGAGTGCTTCTCGCCAGA CGCCAGGGGTTGCTCCTGCG
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MPVEPGQRRFSSTTIEISDMSTVNWITAGEYSDILYHKTEEGIAKITINRPERRNAFRPQTVDQMIEALQDARNDSQIGV IILTGAGDLAFCSGGDQKIRGNAGYADEKGVNKLNVLDFQRDIRTCPKPIIAMVAGYAIGGGHVLHMLCDLTIAAENARF GQTGPRVGSFDGGWGASYMARLVGQKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKLEEETIQWCREILANSPLAIRCL KAALNADCDGQAGLQELAGNATLLYYMSEEGQEGRNAFVEKRKPDFSKFPKRP
Sequences:
>Translated_293_residues MPVEPGQRRFSSTTIEISDMSTVNWITAGEYSDILYHKTEEGIAKITINRPERRNAFRPQTVDQMIEALQDARNDSQIGV IILTGAGDLAFCSGGDQKIRGNAGYADEKGVNKLNVLDFQRDIRTCPKPIIAMVAGYAIGGGHVLHMLCDLTIAAENARF GQTGPRVGSFDGGWGASYMARLVGQKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKLEEETIQWCREILANSPLAIRCL KAALNADCDGQAGLQELAGNATLLYYMSEEGQEGRNAFVEKRKPDFSKFPKRP >Mature_292_residues PVEPGQRRFSSTTIEISDMSTVNWITAGEYSDILYHKTEEGIAKITINRPERRNAFRPQTVDQMIEALQDARNDSQIGVI ILTGAGDLAFCSGGDQKIRGNAGYADEKGVNKLNVLDFQRDIRTCPKPIIAMVAGYAIGGGHVLHMLCDLTIAAENARFG QTGPRVGSFDGGWGASYMARLVGQKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKLEEETIQWCREILANSPLAIRCLK AALNADCDGQAGLQELAGNATLLYYMSEEGQEGRNAFVEKRKPDFSKFPKRP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=244, Percent_Identity=35.655737704918, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI31542718, Length=251, Percent_Identity=30.6772908366534, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI45643119, Length=218, Percent_Identity=29.3577981651376, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI260275230, Length=218, Percent_Identity=29.3577981651376, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI4502327, Length=261, Percent_Identity=29.8850574712644, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI260274832, Length=218, Percent_Identity=29.3577981651376, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI70995211, Length=232, Percent_Identity=28.0172413793103, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI25453481, Length=269, Percent_Identity=26.0223048327138, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI51538573, Length=269, Percent_Identity=26.0223048327138, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4757966, Length=222, Percent_Identity=27.4774774774775, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI51538581, Length=222, Percent_Identity=27.4774774774775, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI157694516, Length=226, Percent_Identity=24.3362831858407, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI213417737, Length=226, Percent_Identity=24.3362831858407, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI4757968, Length=269, Percent_Identity=25.6505576208178, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI49355787, Length=269, Percent_Identity=25.6505576208178, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI37594471, Length=146, Percent_Identity=30.1369863013699, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI37594469, Length=146, Percent_Identity=30.1369863013699, Blast_Score=72, Evalue=7e-13, Organism=Escherichia coli, GI1788597, Length=275, Percent_Identity=76, Blast_Score=447, Evalue=1e-127, Organism=Escherichia coli, GI1787659, Length=251, Percent_Identity=33.4661354581673, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87082183, Length=253, Percent_Identity=32.8063241106719, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI221142681, Length=260, Percent_Identity=31.9230769230769, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1787660, Length=270, Percent_Identity=31.1111111111111, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1788682, Length=202, Percent_Identity=26.2376237623762, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1790281, Length=227, Percent_Identity=29.5154185022026, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17554946, Length=289, Percent_Identity=31.4878892733564, Blast_Score=127, Evalue=6e-30, Organism=Caenorhabditis elegans, GI25145438, Length=249, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17540714, Length=210, Percent_Identity=32.8571428571429, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17560910, Length=193, Percent_Identity=31.0880829015544, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17535521, Length=183, Percent_Identity=29.5081967213115, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17536985, Length=233, Percent_Identity=26.6094420600858, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17549921, Length=198, Percent_Identity=26.7676767676768, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17534483, Length=214, Percent_Identity=26.6355140186916, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI20129971, Length=283, Percent_Identity=33.9222614840989, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI24653477, Length=283, Percent_Identity=33.9222614840989, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI24653139, Length=288, Percent_Identity=27.7777777777778, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI21357171, Length=214, Percent_Identity=31.7757009345794, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI19922422, Length=293, Percent_Identity=26.6211604095563, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24654903, Length=184, Percent_Identity=29.8913043478261, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24650670, Length=176, Percent_Identity=30.6818181818182, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 32381; Mature: 32250
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVEPGQRRFSSTTIEISDMSTVNWITAGEYSDILYHKTEEGIAKITINRPERRNAFRPQ CCCCCCCHHHCCCEEEEECCCEEEEEECCCCCHHHEEECCCCEEEEEECCCHHCCCCCCH TVDQMIEALQDARNDSQIGVIILTGAGDLAFCSGGDQKIRGNAGYADEKGVNKLNVLDFQ HHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCHHHHHH RDIRTCPKPIIAMVAGYAIGGGHVLHMLCDLTIAAENARFGQTGPRVGSFDGGWGASYMA HHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHH RLVGQKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKLEEETIQWCREILANSPLAIRCL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KAALNADCDGQAGLQELAGNATLLYYMSEEGQEGRNAFVEKRKPDFSKFPKRP HHHHCCCCCCCHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHCCCCC >Mature Secondary Structure PVEPGQRRFSSTTIEISDMSTVNWITAGEYSDILYHKTEEGIAKITINRPERRNAFRPQ CCCCCCHHHCCCEEEEECCCEEEEEECCCCCHHHEEECCCCEEEEEECCCHHCCCCCCH TVDQMIEALQDARNDSQIGVIILTGAGDLAFCSGGDQKIRGNAGYADEKGVNKLNVLDFQ HHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCHHHHHH RDIRTCPKPIIAMVAGYAIGGGHVLHMLCDLTIAAENARFGQTGPRVGSFDGGWGASYMA HHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHH RLVGQKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKLEEETIQWCREILANSPLAIRCL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KAALNADCDGQAGLQELAGNATLLYYMSEEGQEGRNAFVEKRKPDFSKFPKRP HHHHCCCCCCCHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]