| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is ppc [H]
Identifier: 21674458
GI number: 21674458
Start: 1549028
End: 1551772
Strand: Direct
Name: ppc [H]
Synonym: CT1640
Alternate gene names: 21674458
Gene position: 1549028-1551772 (Clockwise)
Preceding gene: 21674456
Following gene: 21674459
Centisome position: 71.88
GC content: 61.89
Gene sequence:
>2745_bases ATGATCACCTCTACGACCAGCGTCGTCGATTTCGACAAAGCCTTGCTCGATTTCCGTTACCTGCTCGACTGCTTCATCGA GGTACTGGAAAATCTTGGCCAGGAGGCGCTTGCCCGACACATCGGAGGTGACAGCAAAACGCCTATAAGAGAGTTCGACT GTGCCGAACGCGCCATCCAGGCCTGGTCGATCGTCTTCCAGCTGCTCAACATGGCCGAGGAGAACTCTGCCGCCCAGTAC CGCCGCCGCATCGAATCGAGCGAAGGTGTTGAGTCGCTCAGCGGTCTCTGGGGCGAAGCTTTGCGCCACCTGAAAAACCT CGGTGTCACCGAAGCCGAAATCGCCGCCGAGCTGCCACAGATCGAAGTCGAGCCAACCCTGACGGCGCATCCGACCGAAG CCAAGCGCCGCACCGTGCTCGAACAGCACCGCGAGCTGTATCTTCTGCTCGTCAAGCGCGAGAACCGCATGTGGACGCCC GCCGAGCGTGACAAGATTCGCACCGACATCAAGGTAGTACTCGAGCGGCTCTGGCGCACTGGCGAAATTCTGCTCCAAAA ACCCGAGGTGAGCGCTGAACGGCAGAACGTGCTGCACTACCTGCACACCATATTCCCCGACATCCTGCCCATTCTCGACA ACCGCCTCGAAAAGGCCTGGGCCGTCGCCGGATTCGACCCGGCAATCACAGCCGATCCGCGCAACCTGCCGCGCCTCAGC TTCGGAAGCTGGGTCGGCGGCGACCGCGACGGGCACCCGCTCGTCACCGCCGAAACCACACAGGAGACGCTCCAGGAGAT GCGTCGCCACGCCATCGAGCTTGTCCACCGACAACTCGAACGGCTCGCCTCGATGCTCAGTCTTTCGGGCCGCCTCCAGT CCCCCTCCAGAGCAATGGAGGAGCGCATGGAGACGCTGCGCCACAAGCTCGGCAAAGCGGGTGCGCTCGCTTTCGAAAGA AACCTCCACGAGCCTTGGCGGCAGTTTGTCAACCTGATGATCGCTGCCCTGCCCGCCGGAACAACGGAAAACGAGCACTA TTGTTACCGCCGCCACACCGAGCTGCTCAAAGATCTTGAGCTGCTGATGAGCTCGCTCACAGCCATCAACGCATCAACCA TTGCGCGTGGCGACGTTGCGCCGGTCTACCGCATCGTACAAACCTTCGGTTTCCACCTCGGACGGCTCGACATCCGCCAA AACAGCCGCTTCCACGACCTTGCCCTTTCGCAGCTCATGATGGCGGCGGGACTCGACGGCAAGGGATTTCCCGAATGGAG CGAAGAGGCCCGCCTCGAGTTCCTCGAACGCGAGCTGCTCTCGCCGCGCCCCTTCACCCACCCCGACATGCACGCCGGGC CGGAAGCTGAAACCGTAATCGCCTGCTACCGGGTGCTTTTCGACCACTACCGGCAGTTCGGCCCCGACGGCATCGGCTCG CTGATCGTCAGTATGACGCGCAACCTCTCTGACCTGCTCGTCATCTACCTTTTCGCCCGCGAGGTCGGCCTCATGGTGCG GCACGGCGACGGCGACGCCTGCCCGATTCCGGTGGTGCCGCTCTTCGAAACCATCGACGACCTCGAACGCAGCCACGACA TTCTCGACCGCTTCCTTGCCCATCCGGTCACGCGCCGCAGCATAGCGTTGCAGCAGGAGCTGCACGGACGGCAGAAGCCA GTGCAGCAGGTGATGGTCGGCTACAGCGACAGCAACAAGGACGGCGGCATTGTTACAAGCCTCTGGAGTCTCTACCGCTC CGAAGAGCGTCTCATCGAAACAGGCCGCAAGCACGGCGTTGATATTCTCTTCTTCCACGGACGCGGCGGCAGCATCAGCC GGGGTGCGGGGCCGACCCACCGCTTCATCCGGGCGCAGCCGCACGGCTCGCTCGACGCCGGACTCCGCGTCACCGAACAG GGCGAAACCATTTCGCAAAAGTACGCCAACCGCATCAGCGCAGCCTACAACCTCGAACTCTTTCTGGCCGGAGTCACCGA AGCGCGGCTCGTCCACCGCAAGGAGGGCTACCGCCCGCACCCGCTCGAAAAGGTGATGGACACGCTCGCCCGCAGCAGCA ACAAAGCCTACCGGCAGCTCATCGAAGCCGACGGGCTGCTCGAATTCTTCCGTCAGGCCACGCCGATCGACATCATCGAG TCAAGCCGTATCGGTTCACGCCCCGCACGGCGCACCGGAAGCCAGAGCCTCGAAGACCTCCGCGCCATTCCGTGGGTCTT CAGCTGGAACCAGGCGCGCTTCGGCATTTCAGGATGGTACGGCGCAGGCTCGGCCCTCGAAGAGCTGCGCGCCACCGATC CCGAAACCTTCGAAGTGATGCGCAAAAGCGACTTCTCCTGGGCGCCGTTCCATTATATCATCAACAACATCGCCACCAGC ATTCTCTCGGTTGATCCGTGGATCATGGAGCAGTACGCCTCGCTGGTCGAAAACAAAAACATTCGCGAAAACCTGCTTGG CATGATTCAGGCGGAATATCTGCGCACGATGCGCCTGCTCGACCTGCTCTACGGCGGCCCGCTCAGGGAGAAGCACTTCA ACGTCGCCCGCTTCATCGAAACCCGCCAAGAGGGCCTCAGCAAGCTCCACCGCCTGCAGATCGACCTGCTCAAAAGCTGG CGATCCGCTAAAGCCTCGGGCAACGAACAACAAGCCGATGCCCTGCTCCCCGAGCTTTTCCTGACAGTCAACGCTATTTC CAGCGGACTGAGAACAACCGGGTAA
Upstream 100 bases:
>100_bases CGATCATCCCCGCGCAAAAGATTAGGATTTTGCTTGCAGCCGCGCGAAGCGTAAGTTTCATCGAAATACCAGCCATTGTT CAATCAGAAGTCCCGATACC
Downstream 100 bases:
>100_bases ACAACGAGCGCGGGCATAATGGACATGTCACCTCCACTGCCCGTTTTATAGCACTGCCAAAAAGTCTCTCTCGCTGCTGG GATTCCGGAGTAATGCAAGT
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 914; Mature: 914
Protein sequence:
>914_residues MITSTTSVVDFDKALLDFRYLLDCFIEVLENLGQEALARHIGGDSKTPIREFDCAERAIQAWSIVFQLLNMAEENSAAQY RRRIESSEGVESLSGLWGEALRHLKNLGVTEAEIAAELPQIEVEPTLTAHPTEAKRRTVLEQHRELYLLLVKRENRMWTP AERDKIRTDIKVVLERLWRTGEILLQKPEVSAERQNVLHYLHTIFPDILPILDNRLEKAWAVAGFDPAITADPRNLPRLS FGSWVGGDRDGHPLVTAETTQETLQEMRRHAIELVHRQLERLASMLSLSGRLQSPSRAMEERMETLRHKLGKAGALAFER NLHEPWRQFVNLMIAALPAGTTENEHYCYRRHTELLKDLELLMSSLTAINASTIARGDVAPVYRIVQTFGFHLGRLDIRQ NSRFHDLALSQLMMAAGLDGKGFPEWSEEARLEFLERELLSPRPFTHPDMHAGPEAETVIACYRVLFDHYRQFGPDGIGS LIVSMTRNLSDLLVIYLFAREVGLMVRHGDGDACPIPVVPLFETIDDLERSHDILDRFLAHPVTRRSIALQQELHGRQKP VQQVMVGYSDSNKDGGIVTSLWSLYRSEERLIETGRKHGVDILFFHGRGGSISRGAGPTHRFIRAQPHGSLDAGLRVTEQ GETISQKYANRISAAYNLELFLAGVTEARLVHRKEGYRPHPLEKVMDTLARSSNKAYRQLIEADGLLEFFRQATPIDIIE SSRIGSRPARRTGSQSLEDLRAIPWVFSWNQARFGISGWYGAGSALEELRATDPETFEVMRKSDFSWAPFHYIINNIATS ILSVDPWIMEQYASLVENKNIRENLLGMIQAEYLRTMRLLDLLYGGPLREKHFNVARFIETRQEGLSKLHRLQIDLLKSW RSAKASGNEQQADALLPELFLTVNAISSGLRTTG
Sequences:
>Translated_914_residues MITSTTSVVDFDKALLDFRYLLDCFIEVLENLGQEALARHIGGDSKTPIREFDCAERAIQAWSIVFQLLNMAEENSAAQY RRRIESSEGVESLSGLWGEALRHLKNLGVTEAEIAAELPQIEVEPTLTAHPTEAKRRTVLEQHRELYLLLVKRENRMWTP AERDKIRTDIKVVLERLWRTGEILLQKPEVSAERQNVLHYLHTIFPDILPILDNRLEKAWAVAGFDPAITADPRNLPRLS FGSWVGGDRDGHPLVTAETTQETLQEMRRHAIELVHRQLERLASMLSLSGRLQSPSRAMEERMETLRHKLGKAGALAFER NLHEPWRQFVNLMIAALPAGTTENEHYCYRRHTELLKDLELLMSSLTAINASTIARGDVAPVYRIVQTFGFHLGRLDIRQ NSRFHDLALSQLMMAAGLDGKGFPEWSEEARLEFLERELLSPRPFTHPDMHAGPEAETVIACYRVLFDHYRQFGPDGIGS LIVSMTRNLSDLLVIYLFAREVGLMVRHGDGDACPIPVVPLFETIDDLERSHDILDRFLAHPVTRRSIALQQELHGRQKP VQQVMVGYSDSNKDGGIVTSLWSLYRSEERLIETGRKHGVDILFFHGRGGSISRGAGPTHRFIRAQPHGSLDAGLRVTEQ GETISQKYANRISAAYNLELFLAGVTEARLVHRKEGYRPHPLEKVMDTLARSSNKAYRQLIEADGLLEFFRQATPIDIIE SSRIGSRPARRTGSQSLEDLRAIPWVFSWNQARFGISGWYGAGSALEELRATDPETFEVMRKSDFSWAPFHYIINNIATS ILSVDPWIMEQYASLVENKNIRENLLGMIQAEYLRTMRLLDLLYGGPLREKHFNVARFIETRQEGLSKLHRLQIDLLKSW RSAKASGNEQQADALLPELFLTVNAISSGLRTTG >Mature_914_residues MITSTTSVVDFDKALLDFRYLLDCFIEVLENLGQEALARHIGGDSKTPIREFDCAERAIQAWSIVFQLLNMAEENSAAQY RRRIESSEGVESLSGLWGEALRHLKNLGVTEAEIAAELPQIEVEPTLTAHPTEAKRRTVLEQHRELYLLLVKRENRMWTP AERDKIRTDIKVVLERLWRTGEILLQKPEVSAERQNVLHYLHTIFPDILPILDNRLEKAWAVAGFDPAITADPRNLPRLS FGSWVGGDRDGHPLVTAETTQETLQEMRRHAIELVHRQLERLASMLSLSGRLQSPSRAMEERMETLRHKLGKAGALAFER NLHEPWRQFVNLMIAALPAGTTENEHYCYRRHTELLKDLELLMSSLTAINASTIARGDVAPVYRIVQTFGFHLGRLDIRQ NSRFHDLALSQLMMAAGLDGKGFPEWSEEARLEFLERELLSPRPFTHPDMHAGPEAETVIACYRVLFDHYRQFGPDGIGS LIVSMTRNLSDLLVIYLFAREVGLMVRHGDGDACPIPVVPLFETIDDLERSHDILDRFLAHPVTRRSIALQQELHGRQKP VQQVMVGYSDSNKDGGIVTSLWSLYRSEERLIETGRKHGVDILFFHGRGGSISRGAGPTHRFIRAQPHGSLDAGLRVTEQ GETISQKYANRISAAYNLELFLAGVTEARLVHRKEGYRPHPLEKVMDTLARSSNKAYRQLIEADGLLEFFRQATPIDIIE SSRIGSRPARRTGSQSLEDLRAIPWVFSWNQARFGISGWYGAGSALEELRATDPETFEVMRKSDFSWAPFHYIINNIATS ILSVDPWIMEQYASLVENKNIRENLLGMIQAEYLRTMRLLDLLYGGPLREKHFNVARFIETRQEGLSKLHRLQIDLLKSW RSAKASGNEQQADALLPELFLTVNAISSGLRTTG
Specific function: Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=874, Percent_Identity=31.0068649885584, Blast_Score=310, Evalue=3e-85,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 103809; Mature: 103809
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSTTSVVDFDKALLDFRYLLDCFIEVLENLGQEALARHIGGDSKTPIREFDCAERAIQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHH AWSIVFQLLNMAEENSAAQYRRRIESSEGVESLSGLWGEALRHLKNLGVTEAEIAAELPQ HHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC IEVEPTLTAHPTEAKRRTVLEQHRELYLLLVKRENRMWTPAERDKIRTDIKVVLERLWRT EEECCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC GEILLQKPEVSAERQNVLHYLHTIFPDILPILDNRLEKAWAVAGFDPAITADPRNLPRLS CHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC FGSWVGGDRDGHPLVTAETTQETLQEMRRHAIELVHRQLERLASMLSLSGRLQSPSRAME CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ERMETLRHKLGKAGALAFERNLHEPWRQFVNLMIAALPAGTTENEHYCYRRHTELLKDLE HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH LLMSSLTAINASTIARGDVAPVYRIVQTFGFHLGRLDIRQNSRFHDLALSQLMMAAGLDG HHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHCCCC KGFPEWSEEARLEFLERELLSPRPFTHPDMHAGPEAETVIACYRVLFDHYRQFGPDGIGS CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH LIVSMTRNLSDLLVIYLFAREVGLMVRHGDGDACPIPVVPLFETIDDLERSHDILDRFLA HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HPVTRRSIALQQELHGRQKPVQQVMVGYSDSNKDGGIVTSLWSLYRSEERLIETGRKHGV CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC DILFFHGRGGSISRGAGPTHRFIRAQPHGSLDAGLRVTEQGETISQKYANRISAAYNLEL EEEEEECCCCCCCCCCCCHHHHEECCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHEE FLAGVTEARLVHRKEGYRPHPLEKVMDTLARSSNKAYRQLIEADGLLEFFRQATPIDIIE EEECHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHC SSRIGSRPARRTGSQSLEDLRAIPWVFSWNQARFGISGWYGAGSALEELRATDPETFEVM CCCCCCCCHHHCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHH RKSDFSWAPFHYIINNIATSILSVDPWIMEQYASLVENKNIRENLLGMIQAEYLRTMRLL HHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH DLLYGGPLREKHFNVARFIETRQEGLSKLHRLQIDLLKSWRSAKASGNEQQADALLPELF HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LTVNAISSGLRTTG HHHHHHHHCCCCCC >Mature Secondary Structure MITSTTSVVDFDKALLDFRYLLDCFIEVLENLGQEALARHIGGDSKTPIREFDCAERAIQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHH AWSIVFQLLNMAEENSAAQYRRRIESSEGVESLSGLWGEALRHLKNLGVTEAEIAAELPQ HHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC IEVEPTLTAHPTEAKRRTVLEQHRELYLLLVKRENRMWTPAERDKIRTDIKVVLERLWRT EEECCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC GEILLQKPEVSAERQNVLHYLHTIFPDILPILDNRLEKAWAVAGFDPAITADPRNLPRLS CHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC FGSWVGGDRDGHPLVTAETTQETLQEMRRHAIELVHRQLERLASMLSLSGRLQSPSRAME CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ERMETLRHKLGKAGALAFERNLHEPWRQFVNLMIAALPAGTTENEHYCYRRHTELLKDLE HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH LLMSSLTAINASTIARGDVAPVYRIVQTFGFHLGRLDIRQNSRFHDLALSQLMMAAGLDG HHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHCCCC KGFPEWSEEARLEFLERELLSPRPFTHPDMHAGPEAETVIACYRVLFDHYRQFGPDGIGS CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH LIVSMTRNLSDLLVIYLFAREVGLMVRHGDGDACPIPVVPLFETIDDLERSHDILDRFLA HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HPVTRRSIALQQELHGRQKPVQQVMVGYSDSNKDGGIVTSLWSLYRSEERLIETGRKHGV CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC DILFFHGRGGSISRGAGPTHRFIRAQPHGSLDAGLRVTEQGETISQKYANRISAAYNLEL EEEEEECCCCCCCCCCCCHHHHEECCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHEE FLAGVTEARLVHRKEGYRPHPLEKVMDTLARSSNKAYRQLIEADGLLEFFRQATPIDIIE EEECHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHC SSRIGSRPARRTGSQSLEDLRAIPWVFSWNQARFGISGWYGAGSALEELRATDPETFEVM CCCCCCCCHHHCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHH RKSDFSWAPFHYIINNIATSILSVDPWIMEQYASLVENKNIRENLLGMIQAEYLRTMRLL HHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH DLLYGGPLREKHFNVARFIETRQEGLSKLHRLQIDLLKSWRSAKASGNEQQADALLPELF HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LTVNAISSGLRTTG HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9168622; 7961516 [H]