| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is queF
Identifier: 21674456
GI number: 21674456
Start: 1547771
End: 1548124
Strand: Direct
Name: queF
Synonym: CT1638
Alternate gene names: 21674456
Gene position: 1547771-1548124 (Clockwise)
Preceding gene: 21674446
Following gene: 21674458
Centisome position: 71.82
GC content: 51.98
Gene sequence:
>354_bases ATGAACAAAGAGATCATCGAAGTTTTCGACAACACCTATCCCGACAGGGACTACACTATCGAAATCATCAACCCCGAATT CACCTCGGTCTGCCCCAAAACCGGCCTGCCCGACTTCGGCACAATCACCGTGAATTACGTGCCCGACAAAAGCTGCATCG AGCTCAAGTCCCTCAAATACTACTTCCTCGAATTCCGCAACGCTGGCATCTTCTACGAGAACATCACCAACCGGATTCTC GACGACCTTGTTGAAGCCTGCCAGCCGAGAAGAATGACCGTCAAAACCGAGTGGAACGCCAGAGGCGGCATCACCGAAAC CGTCACCGTCAGCTACAGCAAGAGCAAAGAGTAA
Upstream 100 bases:
>100_bases TCCTGAGGGTCGATCTGGTCACAAATTTAATGAATATCACTGCCGTTTTCTATTTTGCAGCGCTTATGAGCAATCACCTT AACCTATCCGGCTTATACCC
Downstream 100 bases:
>100_bases CCTGTCCAATGCAGAACGCCCCGGATTTCCGGGGCGCTTCTGAAAGAAAACCTCTGTTGTTCATTCCGATCGGAATCAGA ACTTCTCGTGGAGCCAGATG
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MNKEIIEVFDNTYPDRDYTIEIINPEFTSVCPKTGLPDFGTITVNYVPDKSCIELKSLKYYFLEFRNAGIFYENITNRIL DDLVEACQPRRMTVKTEWNARGGITETVTVSYSKSKE
Sequences:
>Translated_117_residues MNKEIIEVFDNTYPDRDYTIEIINPEFTSVCPKTGLPDFGTITVNYVPDKSCIELKSLKYYFLEFRNAGIFYENITNRIL DDLVEACQPRRMTVKTEWNARGGITETVTVSYSKSKE >Mature_117_residues MNKEIIEVFDNTYPDRDYTIEIINPEFTSVCPKTGLPDFGTITVNYVPDKSCIELKSLKYYFLEFRNAGIFYENITNRIL DDLVEACQPRRMTVKTEWNARGGITETVTVSYSKSKE
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): QUEF_CHLTE (Q9F719)
Other databases:
- EMBL: AF287481 - EMBL: AE006470 - RefSeq: NP_662521.1 - ProteinModelPortal: Q9F719 - SMR: Q9F719 - GeneID: 1006126 - GenomeReviews: AE006470_GR - KEGG: cte:CT1638 - NMPDR: fig|194439.1.peg.1615 - TIGR: CT1638 - HOGENOM: HBG294103 - OMA: FRNAGIF - ProtClustDB: PRK13258 - BioCyc: CTEP194439:CT_1638-MONOMER - BRENDA: 1.7.1.13 - GO: GO:0005737 - HAMAP: MF_00818 - InterPro: IPR016856 - InterPro: IPR020602 - PIRSF: PIRSF027377 - TIGRFAMs: TIGR03139
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =1.7.1.13
Molecular weight: Translated: 13565; Mature: 13565
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEIIEVFDNTYPDRDYTIEIINPEFTSVCPKTGLPDFGTITVNYVPDKSCIELKSLKY CCCHHHEECCCCCCCCCEEEEEECCCHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHE YFLEFRNAGIFYENITNRILDDLVEACQPRRMTVKTEWNARGGITETVTVSYSKSKE EEEEECCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEECCCCC >Mature Secondary Structure MNKEIIEVFDNTYPDRDYTIEIINPEFTSVCPKTGLPDFGTITVNYVPDKSCIELKSLKY CCCHHHEECCCCCCCCCEEEEEECCCHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHE YFLEFRNAGIFYENITNRILDDLVEACQPRRMTVKTEWNARGGITETVTVSYSKSKE EEEEECCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10976061; 12093901