| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is glnA [H]
Identifier: 21674232
GI number: 21674232
Start: 1322118
End: 1324262
Strand: Reverse
Name: glnA [H]
Synonym: CT1411
Alternate gene names: 21674232
Gene position: 1324262-1322118 (Counterclockwise)
Preceding gene: 21674233
Following gene: 21674230
Centisome position: 61.45
GC content: 57.76
Gene sequence:
>2145_bases TTGAGTAACGAGAGCAAAAAACCGGTGGCGTCCTACTATGGCGCATTGACCTTTGGTACTGAAGCCATGAGAGCAAAGCT TCCCAAAGAGGTGTTCAAGGCGCTGCAGGACACGATCAAAGCTGGCAAGAAACTTCCCGCTGACATCGCTGGCGTTGTAG CCCACGGGATGAAAGAGTGGGCTATGGAGCATGGCGCTACCCACTATACCCACTGGTTCCAGCCGATGACCGGCACGACC GCAGAAAAACACGATGCCTTCCTGACCACCCAGATGGATGGCACCGTGATCGAGCGTTTTTCGGGCGAGCAGCTCATCCA GGGTGAGCCTGACGCTTCGAGCTTCCCGTCGGGCGGCATGCGTTCGACCTTCGAGGCCCGCGGCTACACCGCATGGGACC CCTCCAGCCCGGCATTCCTGATGAAGGGCGGCAAGGGCATGACCCTCTGCATTCCGACGGTCTTTATCTCTTATCACGGT GAGGCTCTTGACGAGAAGACTCCGCTGCTGCGCTCCATGGATGCTGTCAGCAAGGCCGCCATCCGCCTGCTCGATACCAT CGGTATCACTGGCGTGACCAAGGTCAACACCTATGCCGGTCCCGAGCAGGAGTACTTCCTGATCGACAAAAAGTTCTATG CCCAGCGTCCTGACCTCATAATGACTGGCCGCACCCTGCTTGGTGCACTGCCGCCGAAGGGTCAGCAGCTTGAGGATCAC TACTTCGGTTCGATTCCTGATCGCGTGCTCGAGTTCATGCAAGAGGTCGAAGAGGAACTCTTCTTGCTCGGCATTCCGGC CAAGACTCGTCACAACGAGGTTGCTCCGCACCAGTTCGAAATCGCTCCGATCTTCGAACAAGTCAACCTTGCTTCCGATC ACAACCTGCTCGTCATGGAGGTGATGCGCAAGGTGGCCGACAAGAAAGGCTTTGCCCTTCTTCTCTTTGAAAAGCCCTTC GCAGGCATCAACGGCTCTGGCAAACACAACAACTGGTCGATCGGCATCGATGGCGGCATGAACCTTCTCGATCCCGGTGA TACTCCTGAGTCCAACATCAGCTTCCTCGTTTTCCTCGTCGCCGTGCTCAAGGGTGTGCTGAAACGCTCCGCGATTCTCC GCGCGTCGGTCGCCAGCATCGGCAACGATCACCGTCTTGGCGCCAACGAGGCTCCACCGGCTGTTATCACCGTCTTCCTT GGCGACCTGCTTGAGAAGGTGCTTGACGCCATCGAGAGCGGCAAGGTCGATCTAAAAACCGAGAAGCAGATTCTTGACCT CGGCCTCAGCCACGTGCCGGTGCTCAACAAGGACTACACCGACCGTAACCGCACCTCGCCGTTCGCCTTCACCGGCAACA AGTTCGAGTTCCGCGCCGTTGGCTCCAGCCAGCCGATTTCGGTTCCGAACATGGTGCTCAATACCATTATGGCCGAAGCC CTCGATGACCTGAACGCTGAAATTCTCGCCAAGATCGAGGGCGGCATGGCTAAAGAGGATGCGATTCTCGCCGCCGTGCG CGATGGCATCATCGCCACCAAGGCTGTGCGTTACCCTGGCGACAACTACAGCGAAGATCTCCAGAGGGCTGCTGCCGAGC GTGGTCTGCCGAACATGAAGAACACCCCGGAATCGGTTCGCGCCTGGACCGACAAGGACACCGTCAGTATGTTCGTCAAG TACGGCGTTCTGACTGCCGAGGAGATCGAGTCCCGCTACAACGTCCGTATTGAGCGCTACGTCAAAGGCATCGATATCGA GGCTCGCACGCTTCTGCTCATGATCAAGACCATGGTTATTCCGGACGCATCGGAGTACCAGGGCGATCTGGCCAGCTCCT TCAACAACCTGGCTGCAGCCGCTGAATCCATCGGCCTGTCCGATGCAGCGCTCCAGAGCCAGGCTGGTCTTCTCAAGACG CTGGCCGAAGATCTGTCGAAGCTGATTGATCTGACCGCCATTCTCGAAGAGACCATCGAGGAGATGGAAGAGCAGGAGAG CGAGCTCGACAAGGCCGATTTCTGCTCTGCAAGGCTTCTGCCCTGCATGAATGCCATCCGCGAGGTTGCCGACAAGATCG AGGTACAGGTCGATCGCAGCCGCTGGCAGCTTCCAACCTACTCCGAGATGCTCTTCGAGCACTAA
Upstream 100 bases:
>100_bases GATTACCTTCGATGAAAAGAAATCGAAAAAATAGCCAGCAGTCATTTCAGGTTTAATCAACCACGTTTAAAACAGTCCAA AACAAGTAAAGGAGGATCTC
Downstream 100 bases:
>100_bases GAGCTGGAGCGAAAGCACAAGTAAAAAGAGGCCTGCGAAAGCGGGCCTCTTTTGTTTTGGGCGGAGAAGAGGACGCGGTG GCTGAAAAAGGGAAGACTAC
Product: glutamine synthetase
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 714; Mature: 713
Protein sequence:
>714_residues MSNESKKPVASYYGALTFGTEAMRAKLPKEVFKALQDTIKAGKKLPADIAGVVAHGMKEWAMEHGATHYTHWFQPMTGTT AEKHDAFLTTQMDGTVIERFSGEQLIQGEPDASSFPSGGMRSTFEARGYTAWDPSSPAFLMKGGKGMTLCIPTVFISYHG EALDEKTPLLRSMDAVSKAAIRLLDTIGITGVTKVNTYAGPEQEYFLIDKKFYAQRPDLIMTGRTLLGALPPKGQQLEDH YFGSIPDRVLEFMQEVEEELFLLGIPAKTRHNEVAPHQFEIAPIFEQVNLASDHNLLVMEVMRKVADKKGFALLLFEKPF AGINGSGKHNNWSIGIDGGMNLLDPGDTPESNISFLVFLVAVLKGVLKRSAILRASVASIGNDHRLGANEAPPAVITVFL GDLLEKVLDAIESGKVDLKTEKQILDLGLSHVPVLNKDYTDRNRTSPFAFTGNKFEFRAVGSSQPISVPNMVLNTIMAEA LDDLNAEILAKIEGGMAKEDAILAAVRDGIIATKAVRYPGDNYSEDLQRAAAERGLPNMKNTPESVRAWTDKDTVSMFVK YGVLTAEEIESRYNVRIERYVKGIDIEARTLLLMIKTMVIPDASEYQGDLASSFNNLAAAAESIGLSDAALQSQAGLLKT LAEDLSKLIDLTAILEETIEEMEEQESELDKADFCSARLLPCMNAIREVADKIEVQVDRSRWQLPTYSEMLFEH
Sequences:
>Translated_714_residues MSNESKKPVASYYGALTFGTEAMRAKLPKEVFKALQDTIKAGKKLPADIAGVVAHGMKEWAMEHGATHYTHWFQPMTGTT AEKHDAFLTTQMDGTVIERFSGEQLIQGEPDASSFPSGGMRSTFEARGYTAWDPSSPAFLMKGGKGMTLCIPTVFISYHG EALDEKTPLLRSMDAVSKAAIRLLDTIGITGVTKVNTYAGPEQEYFLIDKKFYAQRPDLIMTGRTLLGALPPKGQQLEDH YFGSIPDRVLEFMQEVEEELFLLGIPAKTRHNEVAPHQFEIAPIFEQVNLASDHNLLVMEVMRKVADKKGFALLLFEKPF AGINGSGKHNNWSIGIDGGMNLLDPGDTPESNISFLVFLVAVLKGVLKRSAILRASVASIGNDHRLGANEAPPAVITVFL GDLLEKVLDAIESGKVDLKTEKQILDLGLSHVPVLNKDYTDRNRTSPFAFTGNKFEFRAVGSSQPISVPNMVLNTIMAEA LDDLNAEILAKIEGGMAKEDAILAAVRDGIIATKAVRYPGDNYSEDLQRAAAERGLPNMKNTPESVRAWTDKDTVSMFVK YGVLTAEEIESRYNVRIERYVKGIDIEARTLLLMIKTMVIPDASEYQGDLASSFNNLAAAAESIGLSDAALQSQAGLLKT LAEDLSKLIDLTAILEETIEEMEEQESELDKADFCSARLLPCMNAIREVADKIEVQVDRSRWQLPTYSEMLFEH >Mature_713_residues SNESKKPVASYYGALTFGTEAMRAKLPKEVFKALQDTIKAGKKLPADIAGVVAHGMKEWAMEHGATHYTHWFQPMTGTTA EKHDAFLTTQMDGTVIERFSGEQLIQGEPDASSFPSGGMRSTFEARGYTAWDPSSPAFLMKGGKGMTLCIPTVFISYHGE ALDEKTPLLRSMDAVSKAAIRLLDTIGITGVTKVNTYAGPEQEYFLIDKKFYAQRPDLIMTGRTLLGALPPKGQQLEDHY FGSIPDRVLEFMQEVEEELFLLGIPAKTRHNEVAPHQFEIAPIFEQVNLASDHNLLVMEVMRKVADKKGFALLLFEKPFA GINGSGKHNNWSIGIDGGMNLLDPGDTPESNISFLVFLVAVLKGVLKRSAILRASVASIGNDHRLGANEAPPAVITVFLG DLLEKVLDAIESGKVDLKTEKQILDLGLSHVPVLNKDYTDRNRTSPFAFTGNKFEFRAVGSSQPISVPNMVLNTIMAEAL DDLNAEILAKIEGGMAKEDAILAAVRDGIIATKAVRYPGDNYSEDLQRAAAERGLPNMKNTPESVRAWTDKDTVSMFVKY GVLTAEEIESRYNVRIERYVKGIDIEARTLLLMIKTMVIPDASEYQGDLASSFNNLAAAAESIGLSDAALQSQAGLLKTL AEDLSKLIDLTAILEETIEEMEEQESELDKADFCSARLLPCMNAIREVADKIEVQVDRSRWQLPTYSEMLFEH
Specific function: Unknown
COG id: COG3968
COG function: function code R; Uncharacterized protein related to glutamine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family. Type 3 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR022147 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF12437 GSIII_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 78553; Mature: 78422
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNESKKPVASYYGALTFGTEAMRAKLPKEVFKALQDTIKAGKKLPADIAGVVAHGMKEW CCCCCCCCHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AMEHGATHYTHWFQPMTGTTAEKHDAFLTTQMDGTVIERFSGEQLIQGEPDASSFPSGGM HHHHCCCHHHHCCCCCCCCCCHHCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCC RSTFEARGYTAWDPSSPAFLMKGGKGMTLCIPTVFISYHGEALDEKTPLLRSMDAVSKAA CCCHHCCCEECCCCCCCEEEEECCCCCEEEHHHHHHHHCCCHHCCCCHHHHHHHHHHHHH IRLLDTIGITGVTKVNTYAGPEQEYFLIDKKFYAQRPDLIMTGRTLLGALPPKGQQLEDH HHHHHHHCCCCCEEECCCCCCCCCEEEEEHHHHCCCCCEEEECHHHHCCCCCCCCCCHHH YFGSIPDRVLEFMQEVEEELFLLGIPAKTRHNEVAPHQFEIAPIFEQVNLASDHNLLVME HCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCHHHH VMRKVADKKGFALLLFEKPFAGINGSGKHNNWSIGIDGGMNLLDPGDTPESNISFLVFLV HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH AVLKGVLKRSAILRASVASIGNDHRLGANEAPPAVITVFLGDLLEKVLDAIESGKVDLKT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH EKQILDLGLSHVPVLNKDYTDRNRTSPFAFTGNKFEFRAVGSSQPISVPNMVLNTIMAEA HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHH LDDLNAEILAKIEGGMAKEDAILAAVRDGIIATKAVRYPGDNYSEDLQRAAAERGLPNMK HHHCCHHHHHHHCCCCCHHHHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHHHCCCCCCC NTPESVRAWTDKDTVSMFVKYGVLTAEEIESRYNVRIERYVKGIDIEARTLLLMIKTMVI CCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCEEHHHHHHCCCCHHHHHHHHHHHHHC PDASEYQGDLASSFNNLAAAAESIGLSDAALQSQAGLLKTLAEDLSKLIDLTAILEETIE CCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMEEQESELDKADFCSARLLPCMNAIREVADKIEVQVDRSRWQLPTYSEMLFEH HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHCC >Mature Secondary Structure SNESKKPVASYYGALTFGTEAMRAKLPKEVFKALQDTIKAGKKLPADIAGVVAHGMKEW CCCCCCCHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AMEHGATHYTHWFQPMTGTTAEKHDAFLTTQMDGTVIERFSGEQLIQGEPDASSFPSGGM HHHHCCCHHHHCCCCCCCCCCHHCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCC RSTFEARGYTAWDPSSPAFLMKGGKGMTLCIPTVFISYHGEALDEKTPLLRSMDAVSKAA CCCHHCCCEECCCCCCCEEEEECCCCCEEEHHHHHHHHCCCHHCCCCHHHHHHHHHHHHH IRLLDTIGITGVTKVNTYAGPEQEYFLIDKKFYAQRPDLIMTGRTLLGALPPKGQQLEDH HHHHHHHCCCCCEEECCCCCCCCCEEEEEHHHHCCCCCEEEECHHHHCCCCCCCCCCHHH YFGSIPDRVLEFMQEVEEELFLLGIPAKTRHNEVAPHQFEIAPIFEQVNLASDHNLLVME HCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCHHHH VMRKVADKKGFALLLFEKPFAGINGSGKHNNWSIGIDGGMNLLDPGDTPESNISFLVFLV HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH AVLKGVLKRSAILRASVASIGNDHRLGANEAPPAVITVFLGDLLEKVLDAIESGKVDLKT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH EKQILDLGLSHVPVLNKDYTDRNRTSPFAFTGNKFEFRAVGSSQPISVPNMVLNTIMAEA HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHH LDDLNAEILAKIEGGMAKEDAILAAVRDGIIATKAVRYPGDNYSEDLQRAAAERGLPNMK HHHCCHHHHHHHCCCCCHHHHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHHHCCCCCCC NTPESVRAWTDKDTVSMFVKYGVLTAEEIESRYNVRIERYVKGIDIEARTLLLMIKTMVI CCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCEEHHHHHHCCCCHHHHHHHHHHHHHC PDASEYQGDLASSFNNLAAAAESIGLSDAALQSQAGLLKTLAEDLSKLIDLTAILEETIE CCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMEEQESELDKADFCSARLLPCMNAIREVADKIEVQVDRSRWQLPTYSEMLFEH HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2576872 [H]