| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674230
Identifier: 21674230
GI number: 21674230
Start: 1320973
End: 1321488
Strand: Reverse
Name: 21674230
Synonym: CT1409
Alternate gene names: NA
Gene position: 1321488-1320973 (Counterclockwise)
Preceding gene: 21674232
Following gene: 21674229
Centisome position: 61.32
GC content: 54.07
Gene sequence:
>516_bases ATGACCGAACTCTTCCAGTACCCGATGTCGTATCCCGGCTGGTGGCTCAACAACTACTACTACTTTACCTGGACGCTGGC CATGCTGTTTCTCGCTGGAGGGTGGGCCATTTTCTACCGGTACGGCAAGTTCAGTTATGGCGTCGATTTCGGCTGTTTCT GGAAAACTGCCCTTCTGGTCATCATGACGACCATCGCCCTCGGCGTTCCGTCGTATTACAACACGAAATTCGTCGCGCAA CATGGCAATGACGGAGATTCCGTTTTGCTTACGCCCGACCGCATCGAGTACCGTTACCGCAACGGCGAGAAGAAGATGTT TCTTTTGAAAGACATCGTGTCGATTTATCAGGAACCGGTGACCTACAACCCGCCGCCGAAGATTTTCATTGTTGCCAAAA ACGCCGGACTCCGGGATTCGATCACCGTCACCGAGGGCAAATACGGCCTTCCGGACGTTGACAAGCTGCTTGCAGCGCTG TCGGCCAGGACGGGCTTGCAGATCAAACGGCCCTAA
Upstream 100 bases:
>100_bases GTTTGAGCGGGATGATGTTGGAACGGCTTTGTGTTTATCGCTCGAAAAGCCGTATAATTGTCGTTCAAAGATAACAAGAA ACATCTCAAGGTTTGCGCCC
Downstream 100 bases:
>100_bases ACACGGTATCCGGCGCATTTCCCATGCAGAGTTCCCGGGGCGCACGAGCTGCCGACGTGCCTGTGCGGCTGGTCGTTGAC ATCGGCAATACCAGCACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTELFQYPMSYPGWWLNNYYYFTWTLAMLFLAGGWAIFYRYGKFSYGVDFGCFWKTALLVIMTTIALGVPSYYNTKFVAQ HGNDGDSVLLTPDRIEYRYRNGEKKMFLLKDIVSIYQEPVTYNPPPKIFIVAKNAGLRDSITVTEGKYGLPDVDKLLAAL SARTGLQIKRP
Sequences:
>Translated_171_residues MTELFQYPMSYPGWWLNNYYYFTWTLAMLFLAGGWAIFYRYGKFSYGVDFGCFWKTALLVIMTTIALGVPSYYNTKFVAQ HGNDGDSVLLTPDRIEYRYRNGEKKMFLLKDIVSIYQEPVTYNPPPKIFIVAKNAGLRDSITVTEGKYGLPDVDKLLAAL SARTGLQIKRP >Mature_170_residues TELFQYPMSYPGWWLNNYYYFTWTLAMLFLAGGWAIFYRYGKFSYGVDFGCFWKTALLVIMTTIALGVPSYYNTKFVAQH GNDGDSVLLTPDRIEYRYRNGEKKMFLLKDIVSIYQEPVTYNPPPKIFIVAKNAGLRDSITVTEGKYGLPDVDKLLAALS ARTGLQIKRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19680; Mature: 19549
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELFQYPMSYPGWWLNNYYYFTWTLAMLFLAGGWAIFYRYGKFSYGVDFGCFWKTALLV CCCHHHCCCCCCCEECCCEEHHHHHHHHHHHHCCCEEEEEECCEECCCCHHHHHHHHHHH IMTTIALGVPSYYNTKFVAQHGNDGDSVLLTPDRIEYRYRNGEKKMFLLKDIVSIYQEPV HHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEECCCCEEHHHHHHHHHHHCCC TYNPPPKIFIVAKNAGLRDSITVTEGKYGLPDVDKLLAALSARTGLQIKRP CCCCCCCEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCEEEECC >Mature Secondary Structure TELFQYPMSYPGWWLNNYYYFTWTLAMLFLAGGWAIFYRYGKFSYGVDFGCFWKTALLV CCHHHCCCCCCCEECCCEEHHHHHHHHHHHHCCCEEEEEECCEECCCCHHHHHHHHHHH IMTTIALGVPSYYNTKFVAQHGNDGDSVLLTPDRIEYRYRNGEKKMFLLKDIVSIYQEPV HHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEECCCCEEHHHHHHHHHHHCCC TYNPPPKIFIVAKNAGLRDSITVTEGKYGLPDVDKLLAALSARTGLQIKRP CCCCCCCEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA