Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674181

Identifier: 21674181

GI number: 21674181

Start: 1278368

End: 1279396

Strand: Direct

Name: 21674181

Synonym: CT1359

Alternate gene names: NA

Gene position: 1278368-1279396 (Clockwise)

Preceding gene: 21674180

Following gene: 21674183

Centisome position: 59.32

GC content: 57.43

Gene sequence:

>1029_bases
ATGTATCCCAATATTTCGGATTGCGGCGTGATCGGTGACACGCGAACTGCCGCCCTGGTCAACTCGAACGGCTCGATCGA
TTATTGTTCGCTGCCCTATTTCGACTCACCAACCGTATTCGCGGCCCTGCTTGATGAACGAAAAGGCGGATATTTCAGTC
TGAAACCCGCCGAAGCTTTTTCTTCCAGGCGAGAGTACCTGCCGGACACCTGCATCCTCTGCACTTCGTTTACGACCAGA
AACGGCAAGGCGGCGCTCTACGACTTCATGCCGCATCAGGATGACAAGACTCGCGAGCGCACCCAGGGTATTCACCGCTG
CATCCGCGTCGATGAGGGACGCGTGAAGTTCACGCTGACGCTCAAGCTGCTCACCTTTCAGCAGACCGGAGCCATCGTCG
CCGCCGCCACCACCTCGCTGCCCGAAAGCATCGGCGGAAAACGCAACTGGGACTACCGCTTCACCTGGATCCGCAACGCC
TCATTCACCCTCAAGGCGTTCTTCGCGCTCAGCCACACCAGCGAAGCGGACACGTTCATCCGGTGGCTGCACGACACCTA
CCGGAAAAACGGCAGCCGCGGATTCAGCCAGAAGCTGAACGCCTTCGTCCAGCGCTTCGACACGGAGATTCTCGACGCGA
GCCTCCTGATCATGCCGCTCGTCGACTTTCTGCCCGTAACCGACCAACGCATCCAGGGCACAATCGAAGCCTGCCAGACG
CATCTCATGGACAATGGATTCATCAGACGTTACCGTGCTGATGACGGACTCGAAGAAGATGAGGGGGGCTTTCTGCTCTG
CAATTTCTGGATGATTGAGTGCCTCGCCTTGTCAGGAAAGAGCGCTGAAGCCGAAAAGCTGCTCGGTATAACGATGGCTG
CGGCCAACGATCTCGGACTGTTTTCGGAAGAGTATGACCCATACAGCAGGGAGATGCTGGGCAACTTCCCACAGGCTTTC
AGCCACATCGGCTACATCAACGCCGCCGCAACCCTGATCGACAGTAAACTGCCACTCGCGAATCCCTGA

Upstream 100 bases:

>100_bases
GAGCGATTCGCCGTTGTAACGGCGAATCGCTCAACTTAGGAAAACATAAAGCATTTTGCGGTTATTGGCGTAAATACAGT
GTTGCACTTCATCTTATGCC

Downstream 100 bases:

>100_bases
TACATAAAATGGCCGGCATCCGCAGCTTATCCCCTGAACTTTGAGACTGATCTCGTCAGGAAAAGCTCGTATCGATGAGA
ACAGGGACTTCACCTTGACA

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glucoamylase; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glycosyl Hydrolase Glucoamylase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MYPNISDCGVIGDTRTAALVNSNGSIDYCSLPYFDSPTVFAALLDERKGGYFSLKPAEAFSSRREYLPDTCILCTSFTTR
NGKAALYDFMPHQDDKTRERTQGIHRCIRVDEGRVKFTLTLKLLTFQQTGAIVAAATTSLPESIGGKRNWDYRFTWIRNA
SFTLKAFFALSHTSEADTFIRWLHDTYRKNGSRGFSQKLNAFVQRFDTEILDASLLIMPLVDFLPVTDQRIQGTIEACQT
HLMDNGFIRRYRADDGLEEDEGGFLLCNFWMIECLALSGKSAEAEKLLGITMAAANDLGLFSEEYDPYSREMLGNFPQAF
SHIGYINAAATLIDSKLPLANP

Sequences:

>Translated_342_residues
MYPNISDCGVIGDTRTAALVNSNGSIDYCSLPYFDSPTVFAALLDERKGGYFSLKPAEAFSSRREYLPDTCILCTSFTTR
NGKAALYDFMPHQDDKTRERTQGIHRCIRVDEGRVKFTLTLKLLTFQQTGAIVAAATTSLPESIGGKRNWDYRFTWIRNA
SFTLKAFFALSHTSEADTFIRWLHDTYRKNGSRGFSQKLNAFVQRFDTEILDASLLIMPLVDFLPVTDQRIQGTIEACQT
HLMDNGFIRRYRADDGLEEDEGGFLLCNFWMIECLALSGKSAEAEKLLGITMAAANDLGLFSEEYDPYSREMLGNFPQAF
SHIGYINAAATLIDSKLPLANP
>Mature_342_residues
MYPNISDCGVIGDTRTAALVNSNGSIDYCSLPYFDSPTVFAALLDERKGGYFSLKPAEAFSSRREYLPDTCILCTSFTTR
NGKAALYDFMPHQDDKTRERTQGIHRCIRVDEGRVKFTLTLKLLTFQQTGAIVAAATTSLPESIGGKRNWDYRFTWIRNA
SFTLKAFFALSHTSEADTFIRWLHDTYRKNGSRGFSQKLNAFVQRFDTEILDASLLIMPLVDFLPVTDQRIQGTIEACQT
HLMDNGFIRRYRADDGLEEDEGGFLLCNFWMIECLALSGKSAEAEKLLGITMAAANDLGLFSEEYDPYSREMLGNFPQAF
SHIGYINAAATLIDSKLPLANP

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38379; Mature: 38379

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPNISDCGVIGDTRTAALVNSNGSIDYCSLPYFDSPTVFAALLDERKGGYFSLKPAEAF
CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECHHHHH
SSRREYLPDTCILCTSFTTRNGKAALYDFMPHQDDKTRERTQGIHRCIRVDEGRVKFTLT
HHHHHHCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
LKLLTFQQTGAIVAAATTSLPESIGGKRNWDYRFTWIRNASFTLKAFFALSHTSEADTFI
EEEEEEECCCCEEEEECHHCHHHCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCHHHHH
RWLHDTYRKNGSRGFSQKLNAFVQRFDTEILDASLLIMPLVDFLPVTDQRIQGTIEACQT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
HLMDNGFIRRYRADDGLEEDEGGFLLCNFWMIECLALSGKSAEAEKLLGITMAAANDLGL
HHHCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHEEHEECCCCCCC
FSEEYDPYSREMLGNFPQAFSHIGYINAAATLIDSKLPLANP
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYPNISDCGVIGDTRTAALVNSNGSIDYCSLPYFDSPTVFAALLDERKGGYFSLKPAEAF
CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECHHHHH
SSRREYLPDTCILCTSFTTRNGKAALYDFMPHQDDKTRERTQGIHRCIRVDEGRVKFTLT
HHHHHHCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
LKLLTFQQTGAIVAAATTSLPESIGGKRNWDYRFTWIRNASFTLKAFFALSHTSEADTFI
EEEEEEECCCCEEEEECHHCHHHCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCHHHHH
RWLHDTYRKNGSRGFSQKLNAFVQRFDTEILDASLLIMPLVDFLPVTDQRIQGTIEACQT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
HLMDNGFIRRYRADDGLEEDEGGFLLCNFWMIECLALSGKSAEAEKLLGITMAAANDLGL
HHHCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHEEHEECCCCCCC
FSEEYDPYSREMLGNFPQAFSHIGYINAAATLIDSKLPLANP
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA