| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674168
Identifier: 21674168
GI number: 21674168
Start: 1264431
End: 1265006
Strand: Direct
Name: 21674168
Synonym: CT1346
Alternate gene names: NA
Gene position: 1264431-1265006 (Clockwise)
Preceding gene: 21674167
Following gene: 21674169
Centisome position: 58.68
GC content: 58.16
Gene sequence:
>576_bases ATGACCAGTGACCCGCACCTCATATTTGCCGATGTGTCGCTGGACATCAAATGCGGTGCGTTCCAGTCGGCCCTCGACAA GCTGAAAGAAGTGGAGCGATGGCTTCCAGAATCCTACATCTTTCATCTGCTTACCGCACGGGCAGCGCGAGGACTGAAAC GGTATGAAGAGGCCATCGAACATCTCGGCCACTGCTGCCGCATCGCACCGGCAAACCAGGTCGCCTGGCGGGAGCTGATC GAGGTCAAGACGCTCCAGTCGCAAGCACCTGAACCGGCGCGGACACCGGCCATCGACGAAGTCGCCGTGGAGTTCGAGGA GCTCTCGAAAGCTCTCGCTGGATTCACTCCACCACGAGCCACCGAATGCTTCGAGCCAACACCGATTGCCGAACAGAAGC AGCCATTCCCCGACGACGCATCGATTGCCGTTCCGACCGAGTCGCTGGCCAAGCTGTTCGTCAATCAGGGCGCGTACAAA AAGGCCATCCGGGTTTACACCTCCCTCATTCAGCTCAATCCGTCAAAGGCAGATCACTACCGGCAGTCCATCGACAAGGT GCTCGAAAAACTCTGA
Upstream 100 bases:
>100_bases TTTTGGCTTTGGAAAAGCGGTCAATAACACATAAAATCTGAACTTACAGGATCGAAGCCTCTCCTGATTTCTCCCAAACC AACCTGACTGAAAACCCGGT
Downstream 100 bases:
>100_bases CCGGCCAACCAGCTACCCGCCGCTCGACATGAATCTGTGTGGTTTGCCCGGCCATTGCGTATATTCATGGCCAGATGCTG CATCGATGCCGTAAAACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MTSDPHLIFADVSLDIKCGAFQSALDKLKEVERWLPESYIFHLLTARAARGLKRYEEAIEHLGHCCRIAPANQVAWRELI EVKTLQSQAPEPARTPAIDEVAVEFEELSKALAGFTPPRATECFEPTPIAEQKQPFPDDASIAVPTESLAKLFVNQGAYK KAIRVYTSLIQLNPSKADHYRQSIDKVLEKL
Sequences:
>Translated_191_residues MTSDPHLIFADVSLDIKCGAFQSALDKLKEVERWLPESYIFHLLTARAARGLKRYEEAIEHLGHCCRIAPANQVAWRELI EVKTLQSQAPEPARTPAIDEVAVEFEELSKALAGFTPPRATECFEPTPIAEQKQPFPDDASIAVPTESLAKLFVNQGAYK KAIRVYTSLIQLNPSKADHYRQSIDKVLEKL >Mature_190_residues TSDPHLIFADVSLDIKCGAFQSALDKLKEVERWLPESYIFHLLTARAARGLKRYEEAIEHLGHCCRIAPANQVAWRELIE VKTLQSQAPEPARTPAIDEVAVEFEELSKALAGFTPPRATECFEPTPIAEQKQPFPDDASIAVPTESLAKLFVNQGAYKK AIRVYTSLIQLNPSKADHYRQSIDKVLEKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21415; Mature: 21283
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDPHLIFADVSLDIKCGAFQSALDKLKEVERWLPESYIFHLLTARAARGLKRYEEAIE CCCCCCEEEEECEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH HLGHCCRIAPANQVAWRELIEVKTLQSQAPEPARTPAIDEVAVEFEELSKALAGFTPPRA HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC TECFEPTPIAEQKQPFPDDASIAVPTESLAKLFVNQGAYKKAIRVYTSLIQLNPSKADHY CCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH RQSIDKVLEKL HHHHHHHHHHC >Mature Secondary Structure TSDPHLIFADVSLDIKCGAFQSALDKLKEVERWLPESYIFHLLTARAARGLKRYEEAIE CCCCCEEEEECEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH HLGHCCRIAPANQVAWRELIEVKTLQSQAPEPARTPAIDEVAVEFEELSKALAGFTPPRA HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC TECFEPTPIAEQKQPFPDDASIAVPTESLAKLFVNQGAYKKAIRVYTSLIQLNPSKADHY CCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH RQSIDKVLEKL HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA