| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673986
Identifier: 21673986
GI number: 21673986
Start: 1089912
End: 1091486
Strand: Direct
Name: 21673986
Synonym: CT1160
Alternate gene names: NA
Gene position: 1089912-1091486 (Clockwise)
Preceding gene: 21673985
Following gene: 21673987
Centisome position: 50.58
GC content: 54.67
Gene sequence:
>1575_bases ATGACCACCCAAGCCCCCTTTTCCCTGCGCGGCAGGAACCCCGATGTGCTCACCTGCATCGCCAACCTCAGCAACGACGA GGTCTTCACCCCGCCGGAGCTGGCGAACCGCATGCTGGATACGCTCACTGAAGCGTGGGCGGCGAACCACAACGGCGCGA ACCTCTGGGCGGACAAGACGGTGACGTTTCTCGACCCCTTCACCAAGTCCGGCATCTTCCTGCGCGAAATCACGCGGCGG TTGGTGGAGGGGCTCACGGAGGAAATCCCGGACTTGCAGGAACGGGTGAACCACATCCTCACCCGGCAGGTCTTCGGCAT CGGCATCACCCGCCTCACCGCGATGCTGGCGCGGCGCAGCGTCTATTGTTCCAAGCACGCCAATGGCCCACATTCCGTTT GCAAGACCTTTACCACGGAAAGCGGCAATATTTGGTTCAAGCGGGTGGAGCACACCTGGAAGGATGGTCGCTGCATCTAT TGCGGCGCCAGCCAGAGCACGCTGGATCGCGGGGAGGAACGGGAAACCCATGCTTATGCGTTCATTCACGCGGACGACAT CCGGACGCGGATCAACGAGATTTTTGGAGGCGACATGCAATTTGACGTGATTATCGGGAATCCACCGTACCAGTTGGATG ACGGCGGATTTGGACGAAGTGCCAGTCCGATCTACCAAAACTTCGTCGAGCAAGCAAAAAAGCTCGAGCCACGCTACCTG GTGATGATCATTCCCTCTCGGTGGATGGGTGGCGGAAAAGGGCTCCGTGAATTTCGCGCTACGATGCTCAAGGACAAGCG CATTCGCAAACTCGTGGATTACGAAAATGCTCAGGACGCATTCCCCGGTGTCGATTTAGCCGGTGGGGTTTGTTATTTCC TCTGGGATCGTGATTGCCCCGGTCTGTGTGAGGTCACCAATATTTCTGGGGGCGAGAGCGTGACCACCGTGCGCCAGCTC GATGAATTCTCAACGTTCATCCGTAACAGTGCAGCCATTTCGATCATTCGAAAAGTTATGGCAACCAATGAACCGCGAAT GAGCGAACAGGTTTCCAATTCAAAACCTTTTGGATTGCGAACCTTTGTCCGCCCGGAAAAGAAAGGGGATCTGATCCTCC GCTGGGAAAAAGGAGAGGGTCCATATCCTCGAGAAAAAGTTACAGCAGGTCACGACATGATCGACAAATGGAAGGTCATC ACGTCCTATGTCGGATATGATCACGCTGGTAATCCGGGCAAAGACGGACGTCGGCGGGTTTTTTCCAAAATTGACATTCT CCCGCCGGGAACGATTTGCACTGAGACCTATCTTGTCGTCGGCAGCTACGGTAGCAAAACGGAAGCAGAGAACTTGGTTG CCTACATGAAGACGAGATTTTTCCGATTTCTTGTCGCACAGTTCATGTATTCGCACCATCTTACAAAGTCCGCCTATGAG CTTGTGCCCATTTTGGATATGAACGAAACATGGACCGATGCAAAGCTTGCTGCACGGTATGGTTTGACCGATGACGAAGT GCAGATCATCGAATCCAAGATACGCCCGTTCGACAATGGCAACGGCGCAGGTTGA
Upstream 100 bases:
>100_bases TCTTTGCCCACCTTGGGAAACATGAGATCTTCACGCCAACCAGGACCTACCCGCCAATGACGGTGAGTGAGCTGGCAGCG CGGGCAGCGGAGGCGAACCT
Downstream 100 bases:
>100_bases GTAAAGCTGGAATTTGCTCATGACGAAATCAGCAGAAGACATACTACTTATCGCAAAGCCGCAGGCGCGACCTCGCATCT ACGCCTATTCCATTGCCGAC
Product: type III restriction system endonuclease, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 523
Protein sequence:
>524_residues MTTQAPFSLRGRNPDVLTCIANLSNDEVFTPPELANRMLDTLTEAWAANHNGANLWADKTVTFLDPFTKSGIFLREITRR LVEGLTEEIPDLQERVNHILTRQVFGIGITRLTAMLARRSVYCSKHANGPHSVCKTFTTESGNIWFKRVEHTWKDGRCIY CGASQSTLDRGEERETHAYAFIHADDIRTRINEIFGGDMQFDVIIGNPPYQLDDGGFGRSASPIYQNFVEQAKKLEPRYL VMIIPSRWMGGGKGLREFRATMLKDKRIRKLVDYENAQDAFPGVDLAGGVCYFLWDRDCPGLCEVTNISGGESVTTVRQL DEFSTFIRNSAAISIIRKVMATNEPRMSEQVSNSKPFGLRTFVRPEKKGDLILRWEKGEGPYPREKVTAGHDMIDKWKVI TSYVGYDHAGNPGKDGRRRVFSKIDILPPGTICTETYLVVGSYGSKTEAENLVAYMKTRFFRFLVAQFMYSHHLTKSAYE LVPILDMNETWTDAKLAARYGLTDDEVQIIESKIRPFDNGNGAG
Sequences:
>Translated_524_residues MTTQAPFSLRGRNPDVLTCIANLSNDEVFTPPELANRMLDTLTEAWAANHNGANLWADKTVTFLDPFTKSGIFLREITRR LVEGLTEEIPDLQERVNHILTRQVFGIGITRLTAMLARRSVYCSKHANGPHSVCKTFTTESGNIWFKRVEHTWKDGRCIY CGASQSTLDRGEERETHAYAFIHADDIRTRINEIFGGDMQFDVIIGNPPYQLDDGGFGRSASPIYQNFVEQAKKLEPRYL VMIIPSRWMGGGKGLREFRATMLKDKRIRKLVDYENAQDAFPGVDLAGGVCYFLWDRDCPGLCEVTNISGGESVTTVRQL DEFSTFIRNSAAISIIRKVMATNEPRMSEQVSNSKPFGLRTFVRPEKKGDLILRWEKGEGPYPREKVTAGHDMIDKWKVI TSYVGYDHAGNPGKDGRRRVFSKIDILPPGTICTETYLVVGSYGSKTEAENLVAYMKTRFFRFLVAQFMYSHHLTKSAYE LVPILDMNETWTDAKLAARYGLTDDEVQIIESKIRPFDNGNGAG >Mature_523_residues TTQAPFSLRGRNPDVLTCIANLSNDEVFTPPELANRMLDTLTEAWAANHNGANLWADKTVTFLDPFTKSGIFLREITRRL VEGLTEEIPDLQERVNHILTRQVFGIGITRLTAMLARRSVYCSKHANGPHSVCKTFTTESGNIWFKRVEHTWKDGRCIYC GASQSTLDRGEERETHAYAFIHADDIRTRINEIFGGDMQFDVIIGNPPYQLDDGGFGRSASPIYQNFVEQAKKLEPRYLV MIIPSRWMGGGKGLREFRATMLKDKRIRKLVDYENAQDAFPGVDLAGGVCYFLWDRDCPGLCEVTNISGGESVTTVRQLD EFSTFIRNSAAISIIRKVMATNEPRMSEQVSNSKPFGLRTFVRPEKKGDLILRWEKGEGPYPREKVTAGHDMIDKWKVIT SYVGYDHAGNPGKDGRRRVFSKIDILPPGTICTETYLVVGSYGSKTEAENLVAYMKTRFFRFLVAQFMYSHHLTKSAYEL VPILDMNETWTDAKLAARYGLTDDEVQIIESKIRPFDNGNGAG
Specific function: Unknown
COG id: COG0827
COG function: function code L; Adenine-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR011639 [H]
Pfam domain/function: PF07669 Eco57I [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 59224; Mature: 59093
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQAPFSLRGRNPDVLTCIANLSNDEVFTPPELANRMLDTLTEAWAANHNGANLWADKT CCCCCCCEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCE VTFLDPFTKSGIFLREITRRLVEGLTEEIPDLQERVNHILTRQVFGIGITRLTAMLARRS EEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYCSKHANGPHSVCKTFTTESGNIWFKRVEHTWKDGRCIYCGASQSTLDRGEERETHAYA HHHHCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHCCCCCCCEEEE FIHADDIRTRINEIFGGDMQFDVIIGNPPYQLDDGGFGRSASPIYQNFVEQAKKLEPRYL EEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE VMIIPSRWMGGGKGLREFRATMLKDKRIRKLVDYENAQDAFPGVDLAGGVCYFLWDRDCP EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC GLCEVTNISGGESVTTVRQLDEFSTFIRNSAAISIIRKVMATNEPRMSEQVSNSKPFGLR CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEE TFVRPEKKGDLILRWEKGEGPYPREKVTAGHDMIDKWKVITSYVGYDHAGNPGKDGRRRV EECCCCCCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH FSKIDILPPGTICTETYLVVGSYGSKTEAENLVAYMKTRFFRFLVAQFMYSHHLTKSAYE HHHHCCCCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPILDMNETWTDAKLAARYGLTDDEVQIIESKIRPFDNGNGAG EEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TTQAPFSLRGRNPDVLTCIANLSNDEVFTPPELANRMLDTLTEAWAANHNGANLWADKT CCCCCCEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCE VTFLDPFTKSGIFLREITRRLVEGLTEEIPDLQERVNHILTRQVFGIGITRLTAMLARRS EEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYCSKHANGPHSVCKTFTTESGNIWFKRVEHTWKDGRCIYCGASQSTLDRGEERETHAYA HHHHCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHCCCCCCCEEEE FIHADDIRTRINEIFGGDMQFDVIIGNPPYQLDDGGFGRSASPIYQNFVEQAKKLEPRYL EEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE VMIIPSRWMGGGKGLREFRATMLKDKRIRKLVDYENAQDAFPGVDLAGGVCYFLWDRDCP EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC GLCEVTNISGGESVTTVRQLDEFSTFIRNSAAISIIRKVMATNEPRMSEQVSNSKPFGLR CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEE TFVRPEKKGDLILRWEKGEGPYPREKVTAGHDMIDKWKVITSYVGYDHAGNPGKDGRRRV EECCCCCCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH FSKIDILPPGTICTETYLVVGSYGSKTEAENLVAYMKTRFFRFLVAQFMYSHHLTKSAYE HHHHCCCCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPILDMNETWTDAKLAARYGLTDDEVQIIESKIRPFDNGNGAG EEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]