| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673987
Identifier: 21673987
GI number: 21673987
Start: 1091500
End: 1094091
Strand: Direct
Name: 21673987
Synonym: CT1161
Alternate gene names: NA
Gene position: 1091500-1094091 (Clockwise)
Preceding gene: 21673986
Following gene: 21673994
Centisome position: 50.65
GC content: 60.92
Gene sequence:
>2592_bases TTGCTCATGACGAAATCAGCAGAAGACATACTACTTATCGCAAAGCCGCAGGCGCGACCTCGCATCTACGCCTATTCCAT TGCCGACGATGCCCACGCCGGGCTCCTCAAGATCGGCCAGACTACGCGGGAAGTAAAGCAGCGCGTGGCGGAGCAGCTCA GAACTGCCGCGATCACCAACTACCGCGTCGAACTGGACGAAGATGCTGCGCGCGCCGACGGCAGCATCATCAGCGACTTT GACGTACGGGCGGCATTGGCGCGCAAGGGCTTTGCTGTGGTCACCGGCGAGTGGGTGCGCTGCGCGGTGGCGGATGTACA AACCGTGCTCACCGAGCTGCGCACCGGGCAGAAGCTCACCGGCACGCACAGCGAGACCTTCGCCATGCGCGAGGAGCAGC GCGAGGCAGTGGAGAAGACGTTGGCTTACTTCGAGTCGATCTGGGCAGAAGACGCCGACGCCGCGCCGCGCTTTCTCTGG AACGCCAAAATGCGCTTCGGCAAGACCTTCACCACCTATCAGCTGGCGAAGCAGCTGGCCGCCCGCCGCGTGCTGGTGGT GACCTTCAAGCCCGCCGTGGAAGATGCCTGGCAGAGCGATCTGGAAGCCCACATCGATTTTGACGGCTGGCAGTTTTTCT CCCGCAACACGCAGGACAACCCAAGCACCGCCGACGCCGACCGACCGCTGGTCTATTTCGGCTCATTTCAGGATTTACTG GGACGTGATGCGGCAGGGAACATCAAACCCAAAAATGAGTGGATCCACACCATCAACTGGGACCTGGTGGTCTTCGACGA GTACCACTTCGGCGCCTGGCGCGAGACGGCCGGGGAATTGTTCGAGGGCGAAGAAGAGGCGGTCGCCAAGAAGGAGGCCA AGCTCGAATACGCCGCCGGCCTGGAGGAGGTGAACGAGGACTTGATGGTGCTATCTGAGCAGGAATGTGATTTCCTCCCC ATCACCAGCAAGGCTTACCTCTACCTTTCCGGCACCCCCTTCAGAGCATTGGCCAGCGGTGAGTTCATCGAAGAGCAGAT CTTCAACTGGACCTACGTCGATGAACAGCGCGCCAAGGAGCGCTTTGCGCGCGAGCATCCCGGCCAGCAGAACCCCTATG CCGCCCTCCCCGAGCTGCGGCTCCTGACCTATCAGATGCCGGACGAGCTACTGGCGATTGCCAGCGGCGGCGAGTTCGAC GAGTTCGACCTCAACGAATTTTTCGCCGCCACCGGCACGGGTGAGCAAGCGCAGTTCAAGCATAAGGATGAGGTGCAAAA GTGGCTCGACATCATCCGTGGCCAGTACTTTCCCAAAGCGAGCGAATATCTCAAGACCGGTACCAAACCGCCCTTCCCCT ACGCCGACGTGCGCCTCTTGCCCTATCTCCAGCATTCGTTCTGGTTTTTGCCCAATGTGGCGGCCTGCCACGCCATGGCG AACCTGCTTGCCGAGAAACACAACACCTTCTGGCACAACTACACCGTGATCGTGGCAGCGGGAGCGGGCGCAGGCATTGG CCTTGACGCCCTGCCGCCGGTGCGCAAAGCCATCGGCAGCGGCTTCGACACCAAGAGCATCACGCTTTCCTGCGGCAAGC TGACGACGGGCGTCACCGTGCCGCAGTGGTCGGCCATCCTCATGCTGCGCAACCTCAAATCGCCGGAAACCTACTTTCAG GCGGCGTTTCGCGTGCAGTCGCCGTGGTCCATCAAGAACCCCAACGGCGACGATCCGAACGAGGAGGAGATTCTCAAACC GGTCTGCTTCGTCTTCGACTTTGCCCCCACGCGGGCCTTGCGCCAGCTCTCCGACTACGCCATCGGCCTGGCTCCCCACG AGAGCAGCCCGGAAAAAGCGGTGGCCGACCTGGTGTCGTTCCTGCCGGTGCTCGCTTTTGATGGCGCCAACATGACGCAG ATCGACGCGGGCGGCATTCTCGACATCGCCATGGCGGGTACTTCGGCCACGCTTCTTGCGCGCAAGTGGGAAAGCGCCTT GCTGGTGAACGTGGATAACGAAACCCTGCGCCGCATCCTGAACAACCCGGAGGCGATGGCGGCTGTCGAGCGTATCGAGG GCTGGCGGAGTCTTGGCGACAACGTCATCGAGGCGATCATCAACCAGAGCGAGAAAATCAAGGCGCTCAAGAAAAAGGCC AAGGATGAGGGTCTCACGCCCACAGAAAAGCGCGAACTCAGCGCCGAGGAAAAGGAGTTCAAATCGAAAAGGAAGCTGGT GCAGAAGAAGCTCATCAAGTTCGCCACGCGCATTCCGGCCTTCATGTACCTGACCGACTTCCGTGAGAACACCTTGCAGG ATGTCGTCACGAAGCTGGAGCCGGATTTGTTTCTGGCCGTCACCGGCCTGACGGTGGAGGACTTTCACCTCCTGGTGCGG CTCAAGGTGTTCAACACCGAGCAGATGAACGCGGCGGTCTTTGCCTTCCGCCGCTACGAGGATGCTTCGCTGGGTTACAC CGGCATCGATAGCCACCGAGGGCTGACACACTACGGGCTGTACGACACCGTGGTCGCGAGGGAGGAATCGCTCTACCATA GCGGGTGCGGCCTAACCCCTCGCTCAAGCTGA
Upstream 100 bases:
>100_bases GCTGCACGGTATGGTTTGACCGATGACGAAGTGCAGATCATCGAATCCAAGATACGCCCGTTCGACAATGGCAACGGCGC AGGTTGAGTAAAGCTGGAAT
Downstream 100 bases:
>100_bases CCCGCTACGGCAGGCAGCTTAGCTCGAACGTTGACCTGCCTCTACGGCGAGTTCTCACCTGCAATCCGCAGCATTCGCTG CTCGCCGTACTCCTCGATCA
Product: type III restriction system endonuclease, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 863; Mature: 863
Protein sequence:
>863_residues MLMTKSAEDILLIAKPQARPRIYAYSIADDAHAGLLKIGQTTREVKQRVAEQLRTAAITNYRVELDEDAARADGSIISDF DVRAALARKGFAVVTGEWVRCAVADVQTVLTELRTGQKLTGTHSETFAMREEQREAVEKTLAYFESIWAEDADAAPRFLW NAKMRFGKTFTTYQLAKQLAARRVLVVTFKPAVEDAWQSDLEAHIDFDGWQFFSRNTQDNPSTADADRPLVYFGSFQDLL GRDAAGNIKPKNEWIHTINWDLVVFDEYHFGAWRETAGELFEGEEEAVAKKEAKLEYAAGLEEVNEDLMVLSEQECDFLP ITSKAYLYLSGTPFRALASGEFIEEQIFNWTYVDEQRAKERFAREHPGQQNPYAALPELRLLTYQMPDELLAIASGGEFD EFDLNEFFAATGTGEQAQFKHKDEVQKWLDIIRGQYFPKASEYLKTGTKPPFPYADVRLLPYLQHSFWFLPNVAACHAMA NLLAEKHNTFWHNYTVIVAAGAGAGIGLDALPPVRKAIGSGFDTKSITLSCGKLTTGVTVPQWSAILMLRNLKSPETYFQ AAFRVQSPWSIKNPNGDDPNEEEILKPVCFVFDFAPTRALRQLSDYAIGLAPHESSPEKAVADLVSFLPVLAFDGANMTQ IDAGGILDIAMAGTSATLLARKWESALLVNVDNETLRRILNNPEAMAAVERIEGWRSLGDNVIEAIINQSEKIKALKKKA KDEGLTPTEKRELSAEEKEFKSKRKLVQKKLIKFATRIPAFMYLTDFRENTLQDVVTKLEPDLFLAVTGLTVEDFHLLVR LKVFNTEQMNAAVFAFRRYEDASLGYTGIDSHRGLTHYGLYDTVVAREESLYHSGCGLTPRSS
Sequences:
>Translated_863_residues MLMTKSAEDILLIAKPQARPRIYAYSIADDAHAGLLKIGQTTREVKQRVAEQLRTAAITNYRVELDEDAARADGSIISDF DVRAALARKGFAVVTGEWVRCAVADVQTVLTELRTGQKLTGTHSETFAMREEQREAVEKTLAYFESIWAEDADAAPRFLW NAKMRFGKTFTTYQLAKQLAARRVLVVTFKPAVEDAWQSDLEAHIDFDGWQFFSRNTQDNPSTADADRPLVYFGSFQDLL GRDAAGNIKPKNEWIHTINWDLVVFDEYHFGAWRETAGELFEGEEEAVAKKEAKLEYAAGLEEVNEDLMVLSEQECDFLP ITSKAYLYLSGTPFRALASGEFIEEQIFNWTYVDEQRAKERFAREHPGQQNPYAALPELRLLTYQMPDELLAIASGGEFD EFDLNEFFAATGTGEQAQFKHKDEVQKWLDIIRGQYFPKASEYLKTGTKPPFPYADVRLLPYLQHSFWFLPNVAACHAMA NLLAEKHNTFWHNYTVIVAAGAGAGIGLDALPPVRKAIGSGFDTKSITLSCGKLTTGVTVPQWSAILMLRNLKSPETYFQ AAFRVQSPWSIKNPNGDDPNEEEILKPVCFVFDFAPTRALRQLSDYAIGLAPHESSPEKAVADLVSFLPVLAFDGANMTQ IDAGGILDIAMAGTSATLLARKWESALLVNVDNETLRRILNNPEAMAAVERIEGWRSLGDNVIEAIINQSEKIKALKKKA KDEGLTPTEKRELSAEEKEFKSKRKLVQKKLIKFATRIPAFMYLTDFRENTLQDVVTKLEPDLFLAVTGLTVEDFHLLVR LKVFNTEQMNAAVFAFRRYEDASLGYTGIDSHRGLTHYGLYDTVVAREESLYHSGCGLTPRSS >Mature_863_residues MLMTKSAEDILLIAKPQARPRIYAYSIADDAHAGLLKIGQTTREVKQRVAEQLRTAAITNYRVELDEDAARADGSIISDF DVRAALARKGFAVVTGEWVRCAVADVQTVLTELRTGQKLTGTHSETFAMREEQREAVEKTLAYFESIWAEDADAAPRFLW NAKMRFGKTFTTYQLAKQLAARRVLVVTFKPAVEDAWQSDLEAHIDFDGWQFFSRNTQDNPSTADADRPLVYFGSFQDLL GRDAAGNIKPKNEWIHTINWDLVVFDEYHFGAWRETAGELFEGEEEAVAKKEAKLEYAAGLEEVNEDLMVLSEQECDFLP ITSKAYLYLSGTPFRALASGEFIEEQIFNWTYVDEQRAKERFAREHPGQQNPYAALPELRLLTYQMPDELLAIASGGEFD EFDLNEFFAATGTGEQAQFKHKDEVQKWLDIIRGQYFPKASEYLKTGTKPPFPYADVRLLPYLQHSFWFLPNVAACHAMA NLLAEKHNTFWHNYTVIVAAGAGAGIGLDALPPVRKAIGSGFDTKSITLSCGKLTTGVTVPQWSAILMLRNLKSPETYFQ AAFRVQSPWSIKNPNGDDPNEEEILKPVCFVFDFAPTRALRQLSDYAIGLAPHESSPEKAVADLVSFLPVLAFDGANMTQ IDAGGILDIAMAGTSATLLARKWESALLVNVDNETLRRILNNPEAMAAVERIEGWRSLGDNVIEAIINQSEKIKALKKKA KDEGLTPTEKRELSAEEKEFKSKRKLVQKKLIKFATRIPAFMYLTDFRENTLQDVVTKLEPDLFLAVTGLTVEDFHLLVR LKVFNTEQMNAAVFAFRRYEDASLGYTGIDSHRGLTHYGLYDTVVAREESLYHSGCGLTPRSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006935 [H]
Pfam domain/function: PF04851 ResIII [H]
EC number: NA
Molecular weight: Translated: 96921; Mature: 96921
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMTKSAEDILLIAKPQARPRIYAYSIADDAHAGLLKIGQTTREVKQRVAEQLRTAAITN CCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHC YRVELDEDAARADGSIISDFDVRAALARKGFAVVTGEWVRCAVADVQTVLTELRTGQKLT EEEEECCCHHHCCCCEECCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCC GTHSETFAMREEQREAVEKTLAYFESIWAEDADAAPRFLWNAKMRFGKTFTTYQLAKQLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH ARRVLVVTFKPAVEDAWQSDLEAHIDFDGWQFFSRNTQDNPSTADADRPLVYFGSFQDLL HCEEEEEEECHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCCCCCCCCEEEECCHHHHH GRDAAGNIKPKNEWIHTINWDLVVFDEYHFGAWRETAGELFEGEEEAVAKKEAKLEYAAG CCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHC LEEVNEDLMVLSEQECDFLPITSKAYLYLSGTPFRALASGEFIEEQIFNWTYVDEQRAKE HHHHCCHHEEEECCCCCEEEECCCEEEEECCCCCHHHHCCHHHHHHHCCCEECCHHHHHH RFAREHPGQQNPYAALPELRLLTYQMPDELLAIASGGEFDEFDLNEFFAATGTGEQAQFK HHHHHCCCCCCCCCCCCCCEEEEECCCHHHEEEECCCCCCCCCHHHHHEECCCCCCCCCC HKDEVQKWLDIIRGQYFPKASEYLKTGTKPPFPYADVRLLPYLQHSFWFLPNVAACHAMA CHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH NLLAEKHNTFWHNYTVIVAAGAGAGIGLDALPPVRKAIGSGFDTKSITLSCGKLTTGVTV HHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCCC PQWSAILMLRNLKSPETYFQAAFRVQSPWSIKNPNGDDPNEEEILKPVCFVFDFAPTRAL CCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH RQLSDYAIGLAPHESSPEKAVADLVSFLPVLAFDGANMTQIDAGGILDIAMAGTSATLLA HHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCHHHHH RKWESALLVNVDNETLRRILNNPEAMAAVERIEGWRSLGDNVIEAIINQSEKIKALKKKA HHCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH KDEGLTPTEKRELSAEEKEFKSKRKLVQKKLIKFATRIPAFMYLTDFRENTLQDVVTKLE HHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC PDLFLAVTGLTVEDFHLLVRLKVFNTEQMNAAVFAFRRYEDASLGYTGIDSHRGLTHYGL CCEEEEEECCCHHHEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCH YDTVVAREESLYHSGCGLTPRSS HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLMTKSAEDILLIAKPQARPRIYAYSIADDAHAGLLKIGQTTREVKQRVAEQLRTAAITN CCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHC YRVELDEDAARADGSIISDFDVRAALARKGFAVVTGEWVRCAVADVQTVLTELRTGQKLT EEEEECCCHHHCCCCEECCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCC GTHSETFAMREEQREAVEKTLAYFESIWAEDADAAPRFLWNAKMRFGKTFTTYQLAKQLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH ARRVLVVTFKPAVEDAWQSDLEAHIDFDGWQFFSRNTQDNPSTADADRPLVYFGSFQDLL HCEEEEEEECHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCCCCCCCCEEEECCHHHHH GRDAAGNIKPKNEWIHTINWDLVVFDEYHFGAWRETAGELFEGEEEAVAKKEAKLEYAAG CCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHC LEEVNEDLMVLSEQECDFLPITSKAYLYLSGTPFRALASGEFIEEQIFNWTYVDEQRAKE HHHHCCHHEEEECCCCCEEEECCCEEEEECCCCCHHHHCCHHHHHHHCCCEECCHHHHHH RFAREHPGQQNPYAALPELRLLTYQMPDELLAIASGGEFDEFDLNEFFAATGTGEQAQFK HHHHHCCCCCCCCCCCCCCEEEEECCCHHHEEEECCCCCCCCCHHHHHEECCCCCCCCCC HKDEVQKWLDIIRGQYFPKASEYLKTGTKPPFPYADVRLLPYLQHSFWFLPNVAACHAMA CHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH NLLAEKHNTFWHNYTVIVAAGAGAGIGLDALPPVRKAIGSGFDTKSITLSCGKLTTGVTV HHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCCC PQWSAILMLRNLKSPETYFQAAFRVQSPWSIKNPNGDDPNEEEILKPVCFVFDFAPTRAL CCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH RQLSDYAIGLAPHESSPEKAVADLVSFLPVLAFDGANMTQIDAGGILDIAMAGTSATLLA HHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCHHHHH RKWESALLVNVDNETLRRILNNPEAMAAVERIEGWRSLGDNVIEAIINQSEKIKALKKKA HHCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH KDEGLTPTEKRELSAEEKEFKSKRKLVQKKLIKFATRIPAFMYLTDFRENTLQDVVTKLE HHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC PDLFLAVTGLTVEDFHLLVRLKVFNTEQMNAAVFAFRRYEDASLGYTGIDSHRGLTHYGL CCEEEEEECCCHHHEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCH YDTVVAREESLYHSGCGLTPRSS HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]