| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673985
Identifier: 21673985
GI number: 21673985
Start: 1089271
End: 1089915
Strand: Direct
Name: 21673985
Synonym: CT1159
Alternate gene names: NA
Gene position: 1089271-1089915 (Clockwise)
Preceding gene: 21673984
Following gene: 21673986
Centisome position: 50.55
GC content: 60.47
Gene sequence:
>645_bases GTGAACTACGTCAAGTCCAAGCAACGTGTCGCCGACCACGGGGAGGTCTTCACTCCGGCGTGGTTGGTCGAGGCAATGAT CGACCTGGTGAAGGACGAGACGGAACGCATCGACGCCCGATTCCTGGAGCCGGCGTGTGGGAGCGGCAATTTCCTGGTAC CCATCCTGCAACGCAAGCTCGCGGCCGTCGAGCGCAAGTTCGGGAAGTCCAACTTTGAGAAACAGCACTACGCGCTTTTC GCCGTAATGTGCACCTACGGGATTGAGCTCCTGGCGGACAACATTGCCGAGTGCCGCGCGAACATGCTGGAAATCTTCGC CGACTATCTGACGCTCGACGAGTCGGACGAACTCTACCGGGCTGCTATCTATGTGTTGTCCCAGAACCTGGTCCACGGCG ACGCCCTGAAGATGCGCACCAGCGACGGCCAGCCCATCGCCTTCGCCGAATGGGGCTACCTCGGCAAGGGCAAGTTCCAA CGGCGTGATTTTCGCCTCGACAGTCTCGCGATGTCGTCAACCTTCAGCGTGGAGGGCTCGCTCTTTGCCCACCTTGGGAA ACATGAGATCTTCACGCCAACCAGGACCTACCCGCCAATGACGGTGAGTGAGCTGGCAGCGCGGGCAGCGGAGGCGAACC TATGA
Upstream 100 bases:
>100_bases TCGCACGCTGAAAGCCGCGCCAGCTCGCCACCCAGCGACGGTCATTCAGGCGTTAGCCCGCAGTGACCAAGAGGAAGCAT CGACTAAAAAGGATCAGCCC
Downstream 100 bases:
>100_bases CCACCCAAGCCCCCTTTTCCCTGCGCGGCAGGAACCCCGATGTGCTCACCTGCATCGCCAACCTCAGCAACGACGAGGTC TTCACCCCGCCGGAGCTGGC
Product: type III restriction system methylase
Products: NA
Alternate protein names: Methylase; DNA Methyltransferase; Type II Restriction- System Modification Subunit
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNYVKSKQRVADHGEVFTPAWLVEAMIDLVKDETERIDARFLEPACGSGNFLVPILQRKLAAVERKFGKSNFEKQHYALF AVMCTYGIELLADNIAECRANMLEIFADYLTLDESDELYRAAIYVLSQNLVHGDALKMRTSDGQPIAFAEWGYLGKGKFQ RRDFRLDSLAMSSTFSVEGSLFAHLGKHEIFTPTRTYPPMTVSELAARAAEANL
Sequences:
>Translated_214_residues MNYVKSKQRVADHGEVFTPAWLVEAMIDLVKDETERIDARFLEPACGSGNFLVPILQRKLAAVERKFGKSNFEKQHYALF AVMCTYGIELLADNIAECRANMLEIFADYLTLDESDELYRAAIYVLSQNLVHGDALKMRTSDGQPIAFAEWGYLGKGKFQ RRDFRLDSLAMSSTFSVEGSLFAHLGKHEIFTPTRTYPPMTVSELAARAAEANL >Mature_214_residues MNYVKSKQRVADHGEVFTPAWLVEAMIDLVKDETERIDARFLEPACGSGNFLVPILQRKLAAVERKFGKSNFEKQHYALF AVMCTYGIELLADNIAECRANMLEIFADYLTLDESDELYRAAIYVLSQNLVHGDALKMRTSDGQPIAFAEWGYLGKGKFQ RRDFRLDSLAMSSTFSVEGSLFAHLGKHEIFTPTRTYPPMTVSELAARAAEANL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24115; Mature: 24115
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYVKSKQRVADHGEVFTPAWLVEAMIDLVKDETERIDARFLEPACGSGNFLVPILQRKL CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH AAVERKFGKSNFEKQHYALFAVMCTYGIELLADNIAECRANMLEIFADYLTLDESDELYR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AAIYVLSQNLVHGDALKMRTSDGQPIAFAEWGYLGKGKFQRRDFRLDSLAMSSTFSVEGS HHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHCCHHHHHHCCCCCCCHH LFAHLGKHEIFTPTRTYPPMTVSELAARAAEANL HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNYVKSKQRVADHGEVFTPAWLVEAMIDLVKDETERIDARFLEPACGSGNFLVPILQRKL CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH AAVERKFGKSNFEKQHYALFAVMCTYGIELLADNIAECRANMLEIFADYLTLDESDELYR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AAIYVLSQNLVHGDALKMRTSDGQPIAFAEWGYLGKGKFQRRDFRLDSLAMSSTFSVEGS HHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHCCHHHHHHCCCCCCCHH LFAHLGKHEIFTPTRTYPPMTVSELAARAAEANL HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA