| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673839
Identifier: 21673839
GI number: 21673839
Start: 954938
End: 955351
Strand: Direct
Name: 21673839
Synonym: CT1011
Alternate gene names: NA
Gene position: 954938-955351 (Clockwise)
Preceding gene: 21673838
Following gene: 21673840
Centisome position: 44.31
GC content: 61.11
Gene sequence:
>414_bases ATGAAGGCATACCAAAACATACTGGTGGCTATCGATGGTTCCGGGGCCGACGACGCGCTGATCGAACAGGTCTCGGCTCT TGCCGCGCCGCTGGGATCGCGCGTGCATCTGTTGCATGTGGTGCACTCTCACACCATCGATCAGGAACGCGCGCTTCGGG AGCAGGCAGGGGAGTTTCTCGAGCGTTATCGGGCCGCGATGCAACAACAGGGTATCGAGGCCGAAGTGCTCATCCGGAGC GGGGAACCCGACCGGGAGATTCTGAAGGAGATCGAAGAGCGCCGTTACGACCTGCTCGCGATGGCGGCACACGGTCACCG CCTGTTTAGTCGCCTGCTTTTCGGCAGCGTTTCCCGCGCCTTGCGTAACAAAATCGACATCCCGCTCCTCTTGGTCAGGG GAGAGGCTCGCTGA
Upstream 100 bases:
>100_bases AGCCGGGGCGTCGAATTCGTTGCGGCGGTGCTGATTACCATGGTGGTCGTTGCGCTCAATCTCTATCTGCTCTCTACCAC AGTGACCGGAGACTCATGAT
Downstream 100 bases:
>100_bases GAGTTTGTCAAGTCCGGAGCATGATCGCCGCAAGCCGTGGCGGAGTCCGGCATCTGTAAAAATTTTTCTGGGATCGGTTT CATCAATCAAAAGATCGGAG
Product: universal stress protein
Products: NA
Alternate protein names: Universal Stress Protein; UspA Domain-Containing Protein
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKAYQNILVAIDGSGADDALIEQVSALAAPLGSRVHLLHVVHSHTIDQERALREQAGEFLERYRAAMQQQGIEAEVLIRS GEPDREILKEIEERRYDLLAMAAHGHRLFSRLLFGSVSRALRNKIDIPLLLVRGEAR
Sequences:
>Translated_137_residues MKAYQNILVAIDGSGADDALIEQVSALAAPLGSRVHLLHVVHSHTIDQERALREQAGEFLERYRAAMQQQGIEAEVLIRS GEPDREILKEIEERRYDLLAMAAHGHRLFSRLLFGSVSRALRNKIDIPLLLVRGEAR >Mature_137_residues MKAYQNILVAIDGSGADDALIEQVSALAAPLGSRVHLLHVVHSHTIDQERALREQAGEFLERYRAAMQQQGIEAEVLIRS GEPDREILKEIEERRYDLLAMAAHGHRLFSRLLFGSVSRALRNKIDIPLLLVRGEAR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15388; Mature: 15388
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAYQNILVAIDGSGADDALIEQVSALAAPLGSRVHLLHVVHSHTIDQERALREQAGEFL CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH ERYRAAMQQQGIEAEVLIRSGEPDREILKEIEERRYDLLAMAAHGHRLFSRLLFGSVSRA HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRNKIDIPLLLVRGEAR HHHCCCCCEEEEECCCC >Mature Secondary Structure MKAYQNILVAIDGSGADDALIEQVSALAAPLGSRVHLLHVVHSHTIDQERALREQAGEFL CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH ERYRAAMQQQGIEAEVLIRSGEPDREILKEIEERRYDLLAMAAHGHRLFSRLLFGSVSRA HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRNKIDIPLLLVRGEAR HHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA