| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is mntH [H]
Identifier: 21673838
GI number: 21673838
Start: 953677
End: 954936
Strand: Direct
Name: mntH [H]
Synonym: CT1010
Alternate gene names: 21673838
Gene position: 953677-954936 (Clockwise)
Preceding gene: 21673837
Following gene: 21673839
Centisome position: 44.26
GC content: 58.57
Gene sequence:
>1260_bases ATGGCAGTTTCATTTTCGAAATTGATACAATCCCGCTGGCTTCCTCTCAAAAAGCTTCTGGGATTTCTCGGACCGGGATT TCTGGTGACGGTTGGATTCATCGACCCTGGCAACTGGGCCACCAATATCGAAGGGGGTGCGCGGTTCGGTTACGAACTGC TCTGGGTGATCACGCTCAGCACGCTGATTCTGATCGTTATCCAGCACATGGCCGCGCGGCTTGGCATCGCCACGGGCAAG TCGCTGGCGGTTAACATTCGAGACCATTTTCCCGCGCCGGTTTCATCGCTTCTTGGCTTTACGATTGTTGCCGCCTGCGT TGCCACCGACGTGGCCGAGCTGGTTGGCGGTGGCATCGGCTTCAGTCTCCTTTTTGGGATGCCGCTCTGGGCCGGGGCGC TTCTGACCGTGGTGCTCGAAGTGTTCCTCGTGGTCAGCCAGCGCTACCATCGCATCGAGACCATTATCGTCGGCTTTCTC GGCATCATCGCGCTCTGCTATCTCGCTGAACTCTGGATCGTCCGACCGGCCTGGCACGAAGTGCTGCCCGCCACGGTCAC GCCGGTGCTGGGCCGTGAGAGCATCTACGTCGCCATTGCCATTCTTGGTGCAGTGGTCATGCCGCACAACGTGTATCTGC ACTCCAACGTCATTCACAGCCGGAAATGGGGGATGACCGATGATGAGAAAAAAGAGCTGCTTCGCTACGAAAAAGCCGAT ACTCTTTTTGCCATGACGCTTGGCTGGGTGGTCAATTCAGCGATGATCGTTGTCGCCGCCGCCGTGTTTCACCAGCATGG CGTGCGGGTCGAGAGCATCGAGCAGGCATCCGCGACGCTCAGACCGCTGGCCGGGCCGCTGGCGGGGTTGCTCTTCGCCG TGGCGCTTGTGTTCGCGGGAGTCGGTTCATCGATCACCTCCTCGATGGCCGAGGCCAACGTCATCACCGGCTTTCTCGGC AAGCCCGAAGACCCGGAGAGCCTGCTCTGGCGCGTGTCGGTGTTCCTGACCGCCATCCCTTCCTTTATCATCATTCTGTT CAAGGTCGATACCTACAAAATCCTGATTTTCAGCCAGGTGGTGCTGAGCCTTCAACTGCCCTTCACGCTTTTGCCGCTCT TGGTGCTCTGCCGGAGCGAAAAGGTGATGGGGGTCTTCCGGAGCCGGGGCGTCGAATTCGTTGCGGCGGTGCTGATTACC ATGGTGGTCGTTGCGCTCAATCTCTATCTGCTCTCTACCACAGTGACCGGAGACTCATGA
Upstream 100 bases:
>100_bases AAGGCTGCGATTGATCTCTTCTGATGTTCCTGATGCCGGGTGACGCGAACTGAAATCGCGGAGCCCCCTCACCGGCAAGG GATTTCCTCAATCCTCGATT
Downstream 100 bases:
>100_bases TATGAAGGCATACCAAAACATACTGGTGGCTATCGATGGTTCCGGGGCCGACGACGCGCTGATCGAACAGGTCTCGGCTC TTGCCGCGCCGCTGGGATCG
Product: natural resistance-associated macrophage protein family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MAVSFSKLIQSRWLPLKKLLGFLGPGFLVTVGFIDPGNWATNIEGGARFGYELLWVITLSTLILIVIQHMAARLGIATGK SLAVNIRDHFPAPVSSLLGFTIVAACVATDVAELVGGGIGFSLLFGMPLWAGALLTVVLEVFLVVSQRYHRIETIIVGFL GIIALCYLAELWIVRPAWHEVLPATVTPVLGRESIYVAIAILGAVVMPHNVYLHSNVIHSRKWGMTDDEKKELLRYEKAD TLFAMTLGWVVNSAMIVVAAAVFHQHGVRVESIEQASATLRPLAGPLAGLLFAVALVFAGVGSSITSSMAEANVITGFLG KPEDPESLLWRVSVFLTAIPSFIIILFKVDTYKILIFSQVVLSLQLPFTLLPLLVLCRSEKVMGVFRSRGVEFVAAVLIT MVVVALNLYLLSTTVTGDS
Sequences:
>Translated_419_residues MAVSFSKLIQSRWLPLKKLLGFLGPGFLVTVGFIDPGNWATNIEGGARFGYELLWVITLSTLILIVIQHMAARLGIATGK SLAVNIRDHFPAPVSSLLGFTIVAACVATDVAELVGGGIGFSLLFGMPLWAGALLTVVLEVFLVVSQRYHRIETIIVGFL GIIALCYLAELWIVRPAWHEVLPATVTPVLGRESIYVAIAILGAVVMPHNVYLHSNVIHSRKWGMTDDEKKELLRYEKAD TLFAMTLGWVVNSAMIVVAAAVFHQHGVRVESIEQASATLRPLAGPLAGLLFAVALVFAGVGSSITSSMAEANVITGFLG KPEDPESLLWRVSVFLTAIPSFIIILFKVDTYKILIFSQVVLSLQLPFTLLPLLVLCRSEKVMGVFRSRGVEFVAAVLIT MVVVALNLYLLSTTVTGDS >Mature_418_residues AVSFSKLIQSRWLPLKKLLGFLGPGFLVTVGFIDPGNWATNIEGGARFGYELLWVITLSTLILIVIQHMAARLGIATGKS LAVNIRDHFPAPVSSLLGFTIVAACVATDVAELVGGGIGFSLLFGMPLWAGALLTVVLEVFLVVSQRYHRIETIIVGFLG IIALCYLAELWIVRPAWHEVLPATVTPVLGRESIYVAIAILGAVVMPHNVYLHSNVIHSRKWGMTDDEKKELLRYEKADT LFAMTLGWVVNSAMIVVAAAVFHQHGVRVESIEQASATLRPLAGPLAGLLFAVALVFAGVGSSITSSMAEANVITGFLGK PEDPESLLWRVSVFLTAIPSFIIILFKVDTYKILIFSQVVLSLQLPFTLLPLLVLCRSEKVMGVFRSRGVEFVAAVLITM VVVALNLYLLSTTVTGDS
Specific function: H(+)-stimulated, highly selective, manganese uptake system [H]
COG id: COG1914
COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NRAMP family [H]
Homologues:
Organism=Homo sapiens, GI109255241, Length=440, Percent_Identity=29.5454545454545, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI295293167, Length=438, Percent_Identity=29.4520547945205, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI295293175, Length=437, Percent_Identity=29.0617848970252, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI295293173, Length=437, Percent_Identity=29.0617848970252, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI10835169, Length=437, Percent_Identity=29.0617848970252, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI295293171, Length=437, Percent_Identity=29.0617848970252, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI295293169, Length=437, Percent_Identity=29.0617848970252, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI295293178, Length=437, Percent_Identity=29.0617848970252, Blast_Score=135, Evalue=6e-32, Organism=Escherichia coli, GI1788736, Length=406, Percent_Identity=38.6699507389163, Blast_Score=239, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17569473, Length=374, Percent_Identity=29.6791443850267, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI193210616, Length=439, Percent_Identity=28.0182232346241, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI71999499, Length=437, Percent_Identity=26.3157894736842, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71993856, Length=211, Percent_Identity=34.5971563981043, Blast_Score=122, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6323062, Length=408, Percent_Identity=33.3333333333333, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6321841, Length=425, Percent_Identity=32, Blast_Score=150, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6324450, Length=428, Percent_Identity=29.9065420560748, Blast_Score=142, Evalue=1e-34, Organism=Drosophila melanogaster, GI24648607, Length=448, Percent_Identity=26.3392857142857, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI281362176, Length=448, Percent_Identity=26.3392857142857, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24648609, Length=448, Percent_Identity=26.3392857142857, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI45553443, Length=419, Percent_Identity=26.2529832935561, Blast_Score=135, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023056 - InterPro: IPR001046 [H]
Pfam domain/function: PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 45368; Mature: 45236
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSFSKLIQSRWLPLKKLLGFLGPGFLVTVGFIDPGNWATNIEGGARFGYELLWVITLS CCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH TLILIVIQHMAARLGIATGKSLAVNIRDHFPAPVSSLLGFTIVAACVATDVAELVGGGIG HHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH FSLLFGMPLWAGALLTVVLEVFLVVSQRYHRIETIIVGFLGIIALCYLAELWIVRPAWHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VLPATVTPVLGRESIYVAIAILGAVVMPHNVYLHSNVIHSRKWGMTDDEKKELLRYEKAD HCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCHHHHHHHHHHHHH TLFAMTLGWVVNSAMIVVAAAVFHQHGVRVESIEQASATLRPLAGPLAGLLFAVALVFAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VGSSITSSMAEANVITGFLGKPEDPESLLWRVSVFLTAIPSFIIILFKVDTYKILIFSQV CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHH VLSLQLPFTLLPLLVLCRSEKVMGVFRSRGVEFVAAVLITMVVVALNLYLLSTTVTGDS HHHHCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCC >Mature Secondary Structure AVSFSKLIQSRWLPLKKLLGFLGPGFLVTVGFIDPGNWATNIEGGARFGYELLWVITLS CCCHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH TLILIVIQHMAARLGIATGKSLAVNIRDHFPAPVSSLLGFTIVAACVATDVAELVGGGIG HHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH FSLLFGMPLWAGALLTVVLEVFLVVSQRYHRIETIIVGFLGIIALCYLAELWIVRPAWHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VLPATVTPVLGRESIYVAIAILGAVVMPHNVYLHSNVIHSRKWGMTDDEKKELLRYEKAD HCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCHHHHHHHHHHHHH TLFAMTLGWVVNSAMIVVAAAVFHQHGVRVESIEQASATLRPLAGPLAGLLFAVALVFAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VGSSITSSMAEANVITGFLGKPEDPESLLWRVSVFLTAIPSFIIILFKVDTYKILIFSQV CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHH VLSLQLPFTLLPLLVLCRSEKVMGVFRSRGVEFVAAVLITMVVVALNLYLLSTTVTGDS HHHHCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]