Click here to switch to the map view.

The map label for this gene is 21673706

Identifier: 21673706

GI number: 21673706

Start: 833163

End: 833669

Strand: Direct

Name: 21673706

Synonym: CT0878

Alternate gene names: NA

Gene position: 833163-833669 (Clockwise)

Preceding gene: 21673704

Following gene: 21673708

Centisome position: 38.66

GC content: 55.62

Gene sequence:

>507_bases
ATGACCAGAAAGAAAGAAGACCCCGGACATTCAGGGCGAGCTGGACGAGCAGCTCGGCTATCCAAAGCATCTCTACCCAT
CGTGCCCAACACCAGCAACAGCCGCAACGGACACGGCAGCAAAACCATTATCGTTGATAACGATCAGTTCACCATCCGCT
CTCCGCGCGACCGCAACGGCAGCTTCGAGCCGCAACTGATCCCCAAACGCCAGACGCGCTTCAAGGGATTCGATGAAAAA
ATCCTGGCCATGGACGCCCGCGGCATGAGCGTCCGCGACATGCAGGCCATGTTACTGGAACTCTACCAGGTCGAAGTCTC
CGAAGCGCTCATCAGCAGCGTGACCGACGCGATCAAGCTGATCTATCTTGCCATGCAGAATATTGCCAAAAAATGGACGA
TGCCGCTACGCAACCGGGGTGCGGTCATCAATCAGTTTTCCATTACATTCGAGGGAAGGGTACCCCTGGTGCCCCCTATG
AAAACGACCGTTGACACACTTGGCTGA

Upstream 100 bases:

>100_bases
ATCGTTACGATACATCCAGGCGACGGCGTAAAAATGGGGGTCTGTAAGATACCGTGTCTAAACGGTCATAGTGTCCTCTC
ATGTAACAAGGAGCAAAACT

Downstream 100 bases:

>100_bases
ACAGGCTCTCGGCGGATTTTCGTAGAGCGCTTTCAGGCTGGCTTCGTCGCGACGGAAGCCGGGCTGGTTCTTGAGCGTTT
TCTCCTTCCTGACATTGATG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTRKKEDPGHSGRAGRAARLSKASLPIVPNTSNSRNGHGSKTIIVDNDQFTIRSPRDRNGSFEPQLIPKRQTRFKGFDEK
ILAMDARGMSVRDMQAMLLELYQVEVSEALISSVTDAIKLIYLAMQNIAKKWTMPLRNRGAVINQFSITFEGRVPLVPPM
KTTVDTLG

Sequences:

>Translated_168_residues
MTRKKEDPGHSGRAGRAARLSKASLPIVPNTSNSRNGHGSKTIIVDNDQFTIRSPRDRNGSFEPQLIPKRQTRFKGFDEK
ILAMDARGMSVRDMQAMLLELYQVEVSEALISSVTDAIKLIYLAMQNIAKKWTMPLRNRGAVINQFSITFEGRVPLVPPM
KTTVDTLG
>Mature_167_residues
TRKKEDPGHSGRAGRAARLSKASLPIVPNTSNSRNGHGSKTIIVDNDQFTIRSPRDRNGSFEPQLIPKRQTRFKGFDEKI
LAMDARGMSVRDMQAMLLELYQVEVSEALISSVTDAIKLIYLAMQNIAKKWTMPLRNRGAVINQFSITFEGRVPLVPPMK
TTVDTLG

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 18756; Mature: 18625

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKKEDPGHSGRAGRAARLSKASLPIVPNTSNSRNGHGSKTIIVDNDQFTIRSPRDRNG
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCC
SFEPQLIPKRQTRFKGFDEKILAMDARGMSVRDMQAMLLELYQVEVSEALISSVTDAIKL
CCCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYLAMQNIAKKWTMPLRNRGAVINQFSITFEGRVPLVPPMKTTVDTLG
HHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
TRKKEDPGHSGRAGRAARLSKASLPIVPNTSNSRNGHGSKTIIVDNDQFTIRSPRDRNG
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCC
SFEPQLIPKRQTRFKGFDEKILAMDARGMSVRDMQAMLLELYQVEVSEALISSVTDAIKL
CCCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYLAMQNIAKKWTMPLRNRGAVINQFSITFEGRVPLVPPMKTTVDTLG
HHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]