| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673708
Identifier: 21673708
GI number: 21673708
Start: 834738
End: 835961
Strand: Direct
Name: 21673708
Synonym: CT0880
Alternate gene names: NA
Gene position: 834738-835961 (Clockwise)
Preceding gene: 21673706
Following gene: 21673710
Centisome position: 38.74
GC content: 53.19
Gene sequence:
>1224_bases ATGCAATTCTTAAAAGTATATTCGGTTTTTGGAGAAGAGGTTGTGGGTTGTCACGTGCGGATCGAGAACCTTTCAGTGGC CTGCTCTGTTGTATCGGCAGGCGGCACTCATCCGTCTGAAAAATGTGTCTGTAACCATGAGTTTTCATCAGTGAGTCTGC ATCAGAAGAAACATCCCCATCTTGAAAAACTGCTTGAAACGTCAAGGCCCATAAAGCTTGACAGTTCGTCCAAAGTGCTG ATTCTGAGCGATCTGCACATGGGTAACGGCGGGCGGCGTGACGAGTTCCGGCGAAATTCGGAGCTTGTTCGTTCGATGCT TCAGGACTATTACCTGCCGGGTGGGTACAGCCTTGTGCTGAACGGCGATATTGAGGAGCTCTTCAAGTTTTCGGTCGAAG ATATAACCAAGGTATGGGGCCATATCTACGATCTGTTTCTGCAATTCGAGAAGAACGGGTTTTTCTGGAAGACCTACGGC AACCACGACTCCGATCTTTTCGAGGAGCGGAATTACCCGCTTTCGAAACATCTGCTCGAATCGATCAGGTTTCAGTACGG GGATGAGGTGATGCTGCTCTTTCACGGTCACCAGGCCTCTATTCTGCTCTGGGAGACCTACCCGCTCGTCAGCCGTGCGG TTGTTCTGTTCCTGCGATACGTGGCTAAGCCCATCGGCATTCGCAACTTTTCGACAGCCTACAACAGCCGTCGCAGGTTT GCCATCGAAAAATCGATCTACGAATTTTCGAACCAGGCCAAAATCGTCTCGATCATCGGTCACACCCATCGCCCGCTGTT TGAGTCGCTCTCGAAGGTCGATCATCTCAAATACAAGATCGAGGAACTTTGCCGCCAGTACCCTTCAGCCCTGCCGGAGG AGCGCCTGGCCATCCAGGAGCGGATCGGCGAGCTGAAGGCGATGCTCGATGCCTGTTTCACGGAGGGCAAGAAGATCGGT CTGCGGAGCGGACGTTACAACAACATCGCCATTCCAAGCGTCTTCAACTCGGGTTGCGCCATCGGCAAGCGGGGCGTCAC TGCGCTCGAAATCGACGGCGACCGCATCCGGCTGGTTTACTGGTTCAAGGAAAAGCAGGGGCGTCGCTTCGTTAGCGACC GCAACAGCGAACCGGAACAGCTTGGTGATACCGGTTTTTACCGCATCGTGCTGAACGAGGACCATCTGGATTATGTGTTC TCGCGGATCAGGCTGCTGGCTTGA
Upstream 100 bases:
>100_bases TGACGAAGCCGTGCTTGAGGCATTCTGAAAAGAAAGTCATTTTTCGTTAAATCTTCAACCAGGCATCCATGAATGGCAGA TCCTTTGCAAAACGAGGTAA
Downstream 100 bases:
>100_bases AAAAAGAACCCGGTCCGATAAGGCGGATGGAGTCTGTTCGGATGAAGAGAGTTTGCTGGAATTTTGCAACGTGCCGATGT GAAAAGGCTTACCTTTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MQFLKVYSVFGEEVVGCHVRIENLSVACSVVSAGGTHPSEKCVCNHEFSSVSLHQKKHPHLEKLLETSRPIKLDSSSKVL ILSDLHMGNGGRRDEFRRNSELVRSMLQDYYLPGGYSLVLNGDIEELFKFSVEDITKVWGHIYDLFLQFEKNGFFWKTYG NHDSDLFEERNYPLSKHLLESIRFQYGDEVMLLFHGHQASILLWETYPLVSRAVVLFLRYVAKPIGIRNFSTAYNSRRRF AIEKSIYEFSNQAKIVSIIGHTHRPLFESLSKVDHLKYKIEELCRQYPSALPEERLAIQERIGELKAMLDACFTEGKKIG LRSGRYNNIAIPSVFNSGCAIGKRGVTALEIDGDRIRLVYWFKEKQGRRFVSDRNSEPEQLGDTGFYRIVLNEDHLDYVF SRIRLLA
Sequences:
>Translated_407_residues MQFLKVYSVFGEEVVGCHVRIENLSVACSVVSAGGTHPSEKCVCNHEFSSVSLHQKKHPHLEKLLETSRPIKLDSSSKVL ILSDLHMGNGGRRDEFRRNSELVRSMLQDYYLPGGYSLVLNGDIEELFKFSVEDITKVWGHIYDLFLQFEKNGFFWKTYG NHDSDLFEERNYPLSKHLLESIRFQYGDEVMLLFHGHQASILLWETYPLVSRAVVLFLRYVAKPIGIRNFSTAYNSRRRF AIEKSIYEFSNQAKIVSIIGHTHRPLFESLSKVDHLKYKIEELCRQYPSALPEERLAIQERIGELKAMLDACFTEGKKIG LRSGRYNNIAIPSVFNSGCAIGKRGVTALEIDGDRIRLVYWFKEKQGRRFVSDRNSEPEQLGDTGFYRIVLNEDHLDYVF SRIRLLA >Mature_407_residues MQFLKVYSVFGEEVVGCHVRIENLSVACSVVSAGGTHPSEKCVCNHEFSSVSLHQKKHPHLEKLLETSRPIKLDSSSKVL ILSDLHMGNGGRRDEFRRNSELVRSMLQDYYLPGGYSLVLNGDIEELFKFSVEDITKVWGHIYDLFLQFEKNGFFWKTYG NHDSDLFEERNYPLSKHLLESIRFQYGDEVMLLFHGHQASILLWETYPLVSRAVVLFLRYVAKPIGIRNFSTAYNSRRRF AIEKSIYEFSNQAKIVSIIGHTHRPLFESLSKVDHLKYKIEELCRQYPSALPEERLAIQERIGELKAMLDACFTEGKKIG LRSGRYNNIAIPSVFNSGCAIGKRGVTALEIDGDRIRLVYWFKEKQGRRFVSDRNSEPEQLGDTGFYRIVLNEDHLDYVF SRIRLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46990; Mature: 46990
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFLKVYSVFGEEVVGCHVRIENLSVACSVVSAGGTHPSEKCVCNHEFSSVSLHQKKHPH CCHHHHHHHHHHHHEEEEEEEECCEEEEEEEECCCCCCCCCEEECCCCCCCCHHHHCCHH LEKLLETSRPIKLDSSSKVLILSDLHMGNGGRRDEFRRNSELVRSMLQDYYLPGGYSLVL HHHHHHCCCCEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE NGDIEELFKFSVEDITKVWGHIYDLFLQFEKNGFFWKTYGNHDSDLFEERNYPLSKHLLE ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCHHHHHHH SIRFQYGDEVMLLFHGHQASILLWETYPLVSRAVVLFLRYVAKPIGIRNFSTAYNSRRRF HHHHHCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHH AIEKSIYEFSNQAKIVSIIGHTHRPLFESLSKVDHLKYKIEELCRQYPSALPEERLAIQE HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RIGELKAMLDACFTEGKKIGLRSGRYNNIAIPSVFNSGCAIGKRGVTALEIDGDRIRLVY HHHHHHHHHHHHHHCCCEECCCCCCCCCEECCCHHCCCCCCCCCCCEEEEECCCEEEEEE WFKEKQGRRFVSDRNSEPEQLGDTGFYRIVLNEDHLDYVFSRIRLLA EEECCCCCCHHHCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHCC >Mature Secondary Structure MQFLKVYSVFGEEVVGCHVRIENLSVACSVVSAGGTHPSEKCVCNHEFSSVSLHQKKHPH CCHHHHHHHHHHHHEEEEEEEECCEEEEEEEECCCCCCCCCEEECCCCCCCCHHHHCCHH LEKLLETSRPIKLDSSSKVLILSDLHMGNGGRRDEFRRNSELVRSMLQDYYLPGGYSLVL HHHHHHCCCCEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE NGDIEELFKFSVEDITKVWGHIYDLFLQFEKNGFFWKTYGNHDSDLFEERNYPLSKHLLE ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCHHHHHHH SIRFQYGDEVMLLFHGHQASILLWETYPLVSRAVVLFLRYVAKPIGIRNFSTAYNSRRRF HHHHHCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHH AIEKSIYEFSNQAKIVSIIGHTHRPLFESLSKVDHLKYKIEELCRQYPSALPEERLAIQE HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RIGELKAMLDACFTEGKKIGLRSGRYNNIAIPSVFNSGCAIGKRGVTALEIDGDRIRLVY HHHHHHHHHHHHHHCCCEECCCCCCCCCEECCCHHCCCCCCCCCCCEEEEECCCEEEEEE WFKEKQGRRFVSDRNSEPEQLGDTGFYRIVLNEDHLDYVFSRIRLLA EEECCCCCCHHHCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA