Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673704

Identifier: 21673704

GI number: 21673704

Start: 831422

End: 832699

Strand: Direct

Name: 21673704

Synonym: CT0876

Alternate gene names: NA

Gene position: 831422-832699 (Clockwise)

Preceding gene: 21673703

Following gene: 21673706

Centisome position: 38.58

GC content: 57.75

Gene sequence:

>1278_bases
ATGAAAACAAAACCGCATGTCTTGATTCTTGGCGGCAACTTTGCCGGATTGCAGGTTGCCCGCCACATCCGCGATCATGT
GAAGCCCGAAGACGCCTCGGTCACCGTGGTCGATAAACGGTCGTACCTGCTCTTTATTCCCAACATCCTGATGGAAATCC
TCGAAAACAAAAATCCGGACAGCAGCATGCAGCTCCCGCTGGCTCCGGTGCTTGACAAGGACGAAACCCGCTTCATCCAG
GCCGAGGTGCTCGACATCGACGTCGAGAGCAAAAAAGTGACCATCCAGCCGACCGAACGGCCTGGCACGACAACCGATGT
GCTTACCTACGACTACCTGGTCATCGCCCTTGGCAACCGGCTCGCGTTTGACAAGATCGACGGCTTCGCCGAGCATGGCC
ACACCGTATCGGACGGTTTTTACGGCAACAAGCTCCGCCACTACCTGCACGAGGGCGGCTACAAGGGAGGCCCGATCGCG
ATCGGCTCGGCTCGATTCCATCAGGGAACGAAAGGCAAGCTCGACTTTGTGCCGATGGCCAAAGCCGCTTGCGAGGGACC
GCCGGTCGAAATAGCGCTGTCGCTTGCTTCGTGGATGAAGCATCATGAAATGGGCGGGCCGGAGAAGGTGACGATCTTCA
CCCCCGCCGATCTGATCGCCGAAGACGCGGGCAAGAACATTGTGAAGCAATTGCTTGAAATCGCGGGCGGCATGGGGTTC
GGTTACAAGAACAAGCTCGAAGACATCAAGCAGATCGGCAAGGATGGCATCGAGTTCGCCAACGGCGAGTCCATCGAGGC
CGAGCTGAAGATCATCCTCCCGGACTGGGTGCCGCACGAATTTCTGAAAGGGCTGCCGATCTGTGATGAAAAGGGGTTCG
TCATTACCAACAAGCAGCTAAAAAATCCAGATTATCCCGAGGTCTACGCCGCCGGTGACGCCGCGGCCTGCACGGTGCCG
AAGCTCGGCTCCATCGGGCACCACCAGTCCTACATCGTCGCGCGGCAACTGGCCCGCGATCTCGGCGCGCTCTCGGACGA
GGAGGCCGACAGCGAACTGTATAGCCCGGAGGTGATCTGTTACGGCGACATGGGTGACGGCAAGGCCTTTTACATCCACT
CGAACGTCTGGTATGGCGGCGACATCGAAATTCTGAAGATGGGTAAGCTCTACTACGACCTGAAGGTTGCCTTCAAAACC
TCCTACTTCGCCATGGGCGGTAAGGTGCCGTACTGGCAGTGGAAGATGGGCTCCTGGATGGGCGACAAGATTTTGTGA

Upstream 100 bases:

>100_bases
TGTAATCACTAAGTATATTGCATAGCATGGGTGTTCTTTTTTTACTGCATGAAAGGTTTCTGATAATTTTTGTAAAAAAC
TAATCGGGAGGATTGTTAGT

Downstream 100 bases:

>100_bases
TCGCGCGTCCGCATCCGGCGACTTTTCAAAGCGCGCGTCCGCAGCCAGCATCGGTTTGCGGAAGCGCACTAAAAAACCTG
CCCAGAACGATCAGCGTCAA

Product: sulfide-quinone reductase, putative

Products: NA

Alternate protein names: Sulfide-Quinone Reductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Quinone Reductase; Sulfide-Quinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Pyridine Nucleotide-Disulphide Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Dehydrogenase; Quinone Reductase; Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Sulfide-Quinone Reductase Related Protein; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Flavoprotein Reductase Conjectural; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Sulfide Dehydrogenase Related Protein

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKTKPHVLILGGNFAGLQVARHIRDHVKPEDASVTVVDKRSYLLFIPNILMEILENKNPDSSMQLPLAPVLDKDETRFIQ
AEVLDIDVESKKVTIQPTERPGTTTDVLTYDYLVIALGNRLAFDKIDGFAEHGHTVSDGFYGNKLRHYLHEGGYKGGPIA
IGSARFHQGTKGKLDFVPMAKAACEGPPVEIALSLASWMKHHEMGGPEKVTIFTPADLIAEDAGKNIVKQLLEIAGGMGF
GYKNKLEDIKQIGKDGIEFANGESIEAELKIILPDWVPHEFLKGLPICDEKGFVITNKQLKNPDYPEVYAAGDAAACTVP
KLGSIGHHQSYIVARQLARDLGALSDEEADSELYSPEVICYGDMGDGKAFYIHSNVWYGGDIEILKMGKLYYDLKVAFKT
SYFAMGGKVPYWQWKMGSWMGDKIL

Sequences:

>Translated_425_residues
MKTKPHVLILGGNFAGLQVARHIRDHVKPEDASVTVVDKRSYLLFIPNILMEILENKNPDSSMQLPLAPVLDKDETRFIQ
AEVLDIDVESKKVTIQPTERPGTTTDVLTYDYLVIALGNRLAFDKIDGFAEHGHTVSDGFYGNKLRHYLHEGGYKGGPIA
IGSARFHQGTKGKLDFVPMAKAACEGPPVEIALSLASWMKHHEMGGPEKVTIFTPADLIAEDAGKNIVKQLLEIAGGMGF
GYKNKLEDIKQIGKDGIEFANGESIEAELKIILPDWVPHEFLKGLPICDEKGFVITNKQLKNPDYPEVYAAGDAAACTVP
KLGSIGHHQSYIVARQLARDLGALSDEEADSELYSPEVICYGDMGDGKAFYIHSNVWYGGDIEILKMGKLYYDLKVAFKT
SYFAMGGKVPYWQWKMGSWMGDKIL
>Mature_425_residues
MKTKPHVLILGGNFAGLQVARHIRDHVKPEDASVTVVDKRSYLLFIPNILMEILENKNPDSSMQLPLAPVLDKDETRFIQ
AEVLDIDVESKKVTIQPTERPGTTTDVLTYDYLVIALGNRLAFDKIDGFAEHGHTVSDGFYGNKLRHYLHEGGYKGGPIA
IGSARFHQGTKGKLDFVPMAKAACEGPPVEIALSLASWMKHHEMGGPEKVTIFTPADLIAEDAGKNIVKQLLEIAGGMGF
GYKNKLEDIKQIGKDGIEFANGESIEAELKIILPDWVPHEFLKGLPICDEKGFVITNKQLKNPDYPEVYAAGDAAACTVP
KLGSIGHHQSYIVARQLARDLGALSDEEADSELYSPEVICYGDMGDGKAFYIHSNVWYGGDIEILKMGKLYYDLKVAFKT
SYFAMGGKVPYWQWKMGSWMGDKIL

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46976; Mature: 46976

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKPHVLILGGNFAGLQVARHIRDHVKPEDASVTVVDKRSYLLFIPNILMEILENKNPD
CCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHCCCCC
SSMQLPLAPVLDKDETRFIQAEVLDIDVESKKVTIQPTERPGTTTDVLTYDYLVIALGNR
CCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHEEEEEEECCE
LAFDKIDGFAEHGHTVSDGFYGNKLRHYLHEGGYKGGPIAIGSARFHQGTKGKLDFVPMA
EEHHHHCCHHHCCCEECCCCCHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCEEEEEHH
KAACEGPPVEIALSLASWMKHHEMGGPEKVTIFTPADLIAEDAGKNIVKQLLEIAGGMGF
HHHCCCCCCEEHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCC
GYKNKLEDIKQIGKDGIEFANGESIEAELKIILPDWVPHEFLKGLPICDEKGFVITNKQL
CCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCCEEEECCCC
KNPDYPEVYAAGDAAACTVPKLGSIGHHQSYIVARQLARDLGALSDEEADSELYSPEVIC
CCCCCCCEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEE
YGDMGDGKAFYIHSNVWYGGDIEILKMGKLYYDLKVAFKTSYFAMGGKVPYWQWKMGSWM
EECCCCCEEEEEECCEEECCCEEEEEECCEEEEEEEEEEEEEEEECCCCCEEEEECCCCC
GDKIL
CCCCC
>Mature Secondary Structure
MKTKPHVLILGGNFAGLQVARHIRDHVKPEDASVTVVDKRSYLLFIPNILMEILENKNPD
CCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHCCCCC
SSMQLPLAPVLDKDETRFIQAEVLDIDVESKKVTIQPTERPGTTTDVLTYDYLVIALGNR
CCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHEEEEEEECCE
LAFDKIDGFAEHGHTVSDGFYGNKLRHYLHEGGYKGGPIAIGSARFHQGTKGKLDFVPMA
EEHHHHCCHHHCCCEECCCCCHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCEEEEEHH
KAACEGPPVEIALSLASWMKHHEMGGPEKVTIFTPADLIAEDAGKNIVKQLLEIAGGMGF
HHHCCCCCCEEHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCC
GYKNKLEDIKQIGKDGIEFANGESIEAELKIILPDWVPHEFLKGLPICDEKGFVITNKQL
CCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCCEEEECCCC
KNPDYPEVYAAGDAAACTVPKLGSIGHHQSYIVARQLARDLGALSDEEADSELYSPEVIC
CCCCCCCEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEE
YGDMGDGKAFYIHSNVWYGGDIEILKMGKLYYDLKVAFKTSYFAMGGKVPYWQWKMGSWM
EECCCCCEEEEEECCEEECCCEEEEEECCEEEEEEEEEEEEEEEECCCCCEEEEECCCCC
GDKIL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA