| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21673704
Identifier: 21673704
GI number: 21673704
Start: 831422
End: 832699
Strand: Direct
Name: 21673704
Synonym: CT0876
Alternate gene names: NA
Gene position: 831422-832699 (Clockwise)
Preceding gene: 21673703
Following gene: 21673706
Centisome position: 38.58
GC content: 57.75
Gene sequence:
>1278_bases ATGAAAACAAAACCGCATGTCTTGATTCTTGGCGGCAACTTTGCCGGATTGCAGGTTGCCCGCCACATCCGCGATCATGT GAAGCCCGAAGACGCCTCGGTCACCGTGGTCGATAAACGGTCGTACCTGCTCTTTATTCCCAACATCCTGATGGAAATCC TCGAAAACAAAAATCCGGACAGCAGCATGCAGCTCCCGCTGGCTCCGGTGCTTGACAAGGACGAAACCCGCTTCATCCAG GCCGAGGTGCTCGACATCGACGTCGAGAGCAAAAAAGTGACCATCCAGCCGACCGAACGGCCTGGCACGACAACCGATGT GCTTACCTACGACTACCTGGTCATCGCCCTTGGCAACCGGCTCGCGTTTGACAAGATCGACGGCTTCGCCGAGCATGGCC ACACCGTATCGGACGGTTTTTACGGCAACAAGCTCCGCCACTACCTGCACGAGGGCGGCTACAAGGGAGGCCCGATCGCG ATCGGCTCGGCTCGATTCCATCAGGGAACGAAAGGCAAGCTCGACTTTGTGCCGATGGCCAAAGCCGCTTGCGAGGGACC GCCGGTCGAAATAGCGCTGTCGCTTGCTTCGTGGATGAAGCATCATGAAATGGGCGGGCCGGAGAAGGTGACGATCTTCA CCCCCGCCGATCTGATCGCCGAAGACGCGGGCAAGAACATTGTGAAGCAATTGCTTGAAATCGCGGGCGGCATGGGGTTC GGTTACAAGAACAAGCTCGAAGACATCAAGCAGATCGGCAAGGATGGCATCGAGTTCGCCAACGGCGAGTCCATCGAGGC CGAGCTGAAGATCATCCTCCCGGACTGGGTGCCGCACGAATTTCTGAAAGGGCTGCCGATCTGTGATGAAAAGGGGTTCG TCATTACCAACAAGCAGCTAAAAAATCCAGATTATCCCGAGGTCTACGCCGCCGGTGACGCCGCGGCCTGCACGGTGCCG AAGCTCGGCTCCATCGGGCACCACCAGTCCTACATCGTCGCGCGGCAACTGGCCCGCGATCTCGGCGCGCTCTCGGACGA GGAGGCCGACAGCGAACTGTATAGCCCGGAGGTGATCTGTTACGGCGACATGGGTGACGGCAAGGCCTTTTACATCCACT CGAACGTCTGGTATGGCGGCGACATCGAAATTCTGAAGATGGGTAAGCTCTACTACGACCTGAAGGTTGCCTTCAAAACC TCCTACTTCGCCATGGGCGGTAAGGTGCCGTACTGGCAGTGGAAGATGGGCTCCTGGATGGGCGACAAGATTTTGTGA
Upstream 100 bases:
>100_bases TGTAATCACTAAGTATATTGCATAGCATGGGTGTTCTTTTTTTACTGCATGAAAGGTTTCTGATAATTTTTGTAAAAAAC TAATCGGGAGGATTGTTAGT
Downstream 100 bases:
>100_bases TCGCGCGTCCGCATCCGGCGACTTTTCAAAGCGCGCGTCCGCAGCCAGCATCGGTTTGCGGAAGCGCACTAAAAAACCTG CCCAGAACGATCAGCGTCAA
Product: sulfide-quinone reductase, putative
Products: NA
Alternate protein names: Sulfide-Quinone Reductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Quinone Reductase; Sulfide-Quinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Pyridine Nucleotide-Disulphide Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Dehydrogenase; Quinone Reductase; Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Sulfide-Quinone Reductase Related Protein; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Flavoprotein Reductase Conjectural; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Sulfide Dehydrogenase Related Protein
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKTKPHVLILGGNFAGLQVARHIRDHVKPEDASVTVVDKRSYLLFIPNILMEILENKNPDSSMQLPLAPVLDKDETRFIQ AEVLDIDVESKKVTIQPTERPGTTTDVLTYDYLVIALGNRLAFDKIDGFAEHGHTVSDGFYGNKLRHYLHEGGYKGGPIA IGSARFHQGTKGKLDFVPMAKAACEGPPVEIALSLASWMKHHEMGGPEKVTIFTPADLIAEDAGKNIVKQLLEIAGGMGF GYKNKLEDIKQIGKDGIEFANGESIEAELKIILPDWVPHEFLKGLPICDEKGFVITNKQLKNPDYPEVYAAGDAAACTVP KLGSIGHHQSYIVARQLARDLGALSDEEADSELYSPEVICYGDMGDGKAFYIHSNVWYGGDIEILKMGKLYYDLKVAFKT SYFAMGGKVPYWQWKMGSWMGDKIL
Sequences:
>Translated_425_residues MKTKPHVLILGGNFAGLQVARHIRDHVKPEDASVTVVDKRSYLLFIPNILMEILENKNPDSSMQLPLAPVLDKDETRFIQ AEVLDIDVESKKVTIQPTERPGTTTDVLTYDYLVIALGNRLAFDKIDGFAEHGHTVSDGFYGNKLRHYLHEGGYKGGPIA IGSARFHQGTKGKLDFVPMAKAACEGPPVEIALSLASWMKHHEMGGPEKVTIFTPADLIAEDAGKNIVKQLLEIAGGMGF GYKNKLEDIKQIGKDGIEFANGESIEAELKIILPDWVPHEFLKGLPICDEKGFVITNKQLKNPDYPEVYAAGDAAACTVP KLGSIGHHQSYIVARQLARDLGALSDEEADSELYSPEVICYGDMGDGKAFYIHSNVWYGGDIEILKMGKLYYDLKVAFKT SYFAMGGKVPYWQWKMGSWMGDKIL >Mature_425_residues MKTKPHVLILGGNFAGLQVARHIRDHVKPEDASVTVVDKRSYLLFIPNILMEILENKNPDSSMQLPLAPVLDKDETRFIQ AEVLDIDVESKKVTIQPTERPGTTTDVLTYDYLVIALGNRLAFDKIDGFAEHGHTVSDGFYGNKLRHYLHEGGYKGGPIA IGSARFHQGTKGKLDFVPMAKAACEGPPVEIALSLASWMKHHEMGGPEKVTIFTPADLIAEDAGKNIVKQLLEIAGGMGF GYKNKLEDIKQIGKDGIEFANGESIEAELKIILPDWVPHEFLKGLPICDEKGFVITNKQLKNPDYPEVYAAGDAAACTVP KLGSIGHHQSYIVARQLARDLGALSDEEADSELYSPEVICYGDMGDGKAFYIHSNVWYGGDIEILKMGKLYYDLKVAFKT SYFAMGGKVPYWQWKMGSWMGDKIL
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46976; Mature: 46976
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKPHVLILGGNFAGLQVARHIRDHVKPEDASVTVVDKRSYLLFIPNILMEILENKNPD CCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHCCCCC SSMQLPLAPVLDKDETRFIQAEVLDIDVESKKVTIQPTERPGTTTDVLTYDYLVIALGNR CCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHEEEEEEECCE LAFDKIDGFAEHGHTVSDGFYGNKLRHYLHEGGYKGGPIAIGSARFHQGTKGKLDFVPMA EEHHHHCCHHHCCCEECCCCCHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCEEEEEHH KAACEGPPVEIALSLASWMKHHEMGGPEKVTIFTPADLIAEDAGKNIVKQLLEIAGGMGF HHHCCCCCCEEHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCC GYKNKLEDIKQIGKDGIEFANGESIEAELKIILPDWVPHEFLKGLPICDEKGFVITNKQL CCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCCEEEECCCC KNPDYPEVYAAGDAAACTVPKLGSIGHHQSYIVARQLARDLGALSDEEADSELYSPEVIC CCCCCCCEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEE YGDMGDGKAFYIHSNVWYGGDIEILKMGKLYYDLKVAFKTSYFAMGGKVPYWQWKMGSWM EECCCCCEEEEEECCEEECCCEEEEEECCEEEEEEEEEEEEEEEECCCCCEEEEECCCCC GDKIL CCCCC >Mature Secondary Structure MKTKPHVLILGGNFAGLQVARHIRDHVKPEDASVTVVDKRSYLLFIPNILMEILENKNPD CCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHCCCCC SSMQLPLAPVLDKDETRFIQAEVLDIDVESKKVTIQPTERPGTTTDVLTYDYLVIALGNR CCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHEEEEEEECCE LAFDKIDGFAEHGHTVSDGFYGNKLRHYLHEGGYKGGPIAIGSARFHQGTKGKLDFVPMA EEHHHHCCHHHCCCEECCCCCHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCEEEEEHH KAACEGPPVEIALSLASWMKHHEMGGPEKVTIFTPADLIAEDAGKNIVKQLLEIAGGMGF HHHCCCCCCEEHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCC GYKNKLEDIKQIGKDGIEFANGESIEAELKIILPDWVPHEFLKGLPICDEKGFVITNKQL CCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCCEEEECCCC KNPDYPEVYAAGDAAACTVPKLGSIGHHQSYIVARQLARDLGALSDEEADSELYSPEVIC CCCCCCCEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEE YGDMGDGKAFYIHSNVWYGGDIEILKMGKLYYDLKVAFKTSYFAMGGKVPYWQWKMGSWM EECCCCCEEEEEECCEEECCCEEEEEECCEEEEEEEEEEEEEEEECCCCCEEEEECCCCC GDKIL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA