| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is trpF
Identifier: 21673548
GI number: 21673548
Start: 700418
End: 701083
Strand: Reverse
Name: trpF
Synonym: CT0718
Alternate gene names: 21673548
Gene position: 701083-700418 (Counterclockwise)
Preceding gene: 21673551
Following gene: 21673544
Centisome position: 32.53
GC content: 60.81
Gene sequence:
>666_bases ATGACGAAAATCAAGATCTGCGGCATCACCCGCGCGCAAGATGCCCTGGAAGCAGCGCTCGCTGGTGCCGACGCCCTCGG CTTCAACTTCAGCCGCAAAAGCCCCCGCAGGATTGATGCCGAAACGGCCCGAAGCATTATCGCCGGATTGCCTCCGCTGG TCACGCCGGTCGGTGTCTTCGTTGAGCAGTCGCCCGAGGAGATCAACGACATCTGCCGCCACTGCGGCTTGCTGGTCGCG CAACTCCATTCGGATGACTACGATGCTGAAAAGACTTTGCAGATCAAGGGCGTTCGGGTGATCCGGGTGTTCCGGCCAAG TCCGGGTTTTGAGGTTTCGCAGGTGAGAAAGTTCACTGAAAAAACGGGATGCAGGAGCTTTCTGTTCGACGCTTACAGCC CGGCGATGGCTGGCGGCACCGGCCAGAGCATCGAGGCACAAACAGCGGGGTCGCTGTTTGATGAAACTCGTGATTTCAGC TGGGCGCTGCTCGCGGGCGGACTGAAGCCGGAGAACGTCGGTGACGCCGTGACGCTGATAAGGCCCTGGGGCGTCGATAC GGCCAGCGGCGTCGAGTCGGGACCAGGCATCAAGGATGCGCTGAAGATCAGGCAGTTCGTCGAAGCAGTGCGCAAGGCCG ACCGGTCGCTCACGAATTGCTGCTGA
Upstream 100 bases:
>100_bases TAGCTTAAAACACAAAATGAAGCCCGAATGAGCGCGAAAAAGAGAGCGGGCTTTTTTACCTTTCTATTCAGCTTTCTGTA ACATACATTCCGGCTCGCTC
Downstream 100 bases:
>100_bases TGTGCTGAAGCACAATCTCCGCAGCAGTTTGTGGAAGCTCCAGCGTGATGAGATGGCCGCAATCCGGCACGCAGAGATAG CTGCCTGATGGGGTCATTTC
Product: N-(5'-phosphoribosyl)-anthranilate isomerase
Products: NA
Alternate protein names: PRAI
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTKIKICGITRAQDALEAALAGADALGFNFSRKSPRRIDAETARSIIAGLPPLVTPVGVFVEQSPEEINDICRHCGLLVA QLHSDDYDAEKTLQIKGVRVIRVFRPSPGFEVSQVRKFTEKTGCRSFLFDAYSPAMAGGTGQSIEAQTAGSLFDETRDFS WALLAGGLKPENVGDAVTLIRPWGVDTASGVESGPGIKDALKIRQFVEAVRKADRSLTNCC
Sequences:
>Translated_221_residues MTKIKICGITRAQDALEAALAGADALGFNFSRKSPRRIDAETARSIIAGLPPLVTPVGVFVEQSPEEINDICRHCGLLVA QLHSDDYDAEKTLQIKGVRVIRVFRPSPGFEVSQVRKFTEKTGCRSFLFDAYSPAMAGGTGQSIEAQTAGSLFDETRDFS WALLAGGLKPENVGDAVTLIRPWGVDTASGVESGPGIKDALKIRQFVEAVRKADRSLTNCC >Mature_220_residues TKIKICGITRAQDALEAALAGADALGFNFSRKSPRRIDAETARSIIAGLPPLVTPVGVFVEQSPEEINDICRHCGLLVAQ LHSDDYDAEKTLQIKGVRVIRVFRPSPGFEVSQVRKFTEKTGCRSFLFDAYSPAMAGGTGQSIEAQTAGSLFDETRDFSW ALLAGGLKPENVGDAVTLIRPWGVDTASGVESGPGIKDALKIRQFVEAVRKADRSLTNCC
Specific function: Bifunctional Enzyme That Catalyzes Two Sequential Steps Of Tryptophan Biosynthetic Pathway. The First Reaction Is Catalyzed By The Isomerase, Coded By The Trpf Domain; The Second Reaction Is Catalyzed By The Synthase, Coded By The Trpc Domain. [C]
COG id: COG0135
COG function: function code E; Phosphoribosylanthranilate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trpF family
Homologues:
Organism=Escherichia coli, GI87081863, Length=218, Percent_Identity=30.7339449541284, Blast_Score=70, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320210, Length=223, Percent_Identity=33.1838565022422, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TRPF_CHLTE (Q8KEH1)
Other databases:
- EMBL: AE006470 - RefSeq: NP_661613.1 - ProteinModelPortal: Q8KEH1 - SMR: Q8KEH1 - GeneID: 1006346 - GenomeReviews: AE006470_GR - KEGG: cte:CT0718 - NMPDR: fig|194439.1.peg.707 - TIGR: CT0718 - HOGENOM: HBG554803 - OMA: SKICGIT - ProtClustDB: CLSK637437 - BioCyc: CTEP194439:CT_0718-MONOMER - BRENDA: 5.3.1.24 - HAMAP: MF_00135_B - InterPro: IPR013785 - InterPro: IPR001240 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF00697 PRAI; SSF51366 RibP_bind_barrel
EC number: =5.3.1.24
Molecular weight: Translated: 23801; Mature: 23670
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIKICGITRAQDALEAALAGADALGFNFSRKSPRRIDAETARSIIAGLPPLVTPVGVF CCEEEEECCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH VEQSPEEINDICRHCGLLVAQLHSDDYDAEKTLQIKGVRVIRVFRPSPGFEVSQVRKFTE HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEEECCCCCCCHHHHHHHHH KTGCRSFLFDAYSPAMAGGTGQSIEAQTAGSLFDETRDFSWALLAGGLKPENVGDAVTLI HHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEEE RPWGVDTASGVESGPGIKDALKIRQFVEAVRKADRSLTNCC ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKIKICGITRAQDALEAALAGADALGFNFSRKSPRRIDAETARSIIAGLPPLVTPVGVF CEEEEECCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH VEQSPEEINDICRHCGLLVAQLHSDDYDAEKTLQIKGVRVIRVFRPSPGFEVSQVRKFTE HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEEECCCCCCCHHHHHHHHH KTGCRSFLFDAYSPAMAGGTGQSIEAQTAGSLFDETRDFSWALLAGGLKPENVGDAVTLI HHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEEE RPWGVDTASGVESGPGIKDALKIRQFVEAVRKADRSLTNCC ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901