Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is yvdB [H]

Identifier: 21673544

GI number: 21673544

Start: 695429

End: 697285

Strand: Reverse

Name: yvdB [H]

Synonym: CT0714

Alternate gene names: 21673544

Gene position: 697285-695429 (Counterclockwise)

Preceding gene: 21673548

Following gene: 21673542

Centisome position: 32.36

GC content: 60.74

Gene sequence:

>1857_bases
ATGAGCCCGGAGAGTCGAACCCTTCCGGGCATTATCCGTTCGGGCGACCCGTCGATTTGCCGTCCGCCGGTGGCAGGGAA
CTGCCGTTCCTTCACATCAGACCATTTCCAGCAAATGTTCAAACCAAAACTGTTTACCGTTCTTCCAGAGCTGACCAAGG
AGCAGCTTGGCCGTGACATCGTGTCCGGAATTCTCGTCGGCATCGTGGCCCTGCCGCTTGGCATCGCCTTCGCCATTGCC
TCGGGCGTTTCGCCCGAAAAGGGCCTCATCAGCGCCGTCATCGGCGGCTTCCTCATCTCCTTTCTCGGCGGCAGCCGCGT
CCAGATCGGCGGGCCGACCGGTGCGTTCATCGTTATTCTCTACGGTATCGTGCAGCAGTACGGCCTCAACGGCCTCATGA
TCGCCACCATCATGGCGGGCGTGATTCTTATCATCATGGGCCTGTCACACCTCGGCTCGCTCATCAAGTTCATCCCCTAT
CCGGTCGTGGTTGGCTTCACCAGCGGCATCGCGATCATCATCTTTTCGAGTGAAGTCAAGGACTTTCTCGGTCTGCACAT
GGCCAGCGTACCCGCCGACTTCATCGACAAGTGGGCCGCCTACTTCAAAGCCCTGCCGACGGCCAGCCCGGAGACGATTC
TCGTCGGCGCGGTGGCCCTCTTGATTATCGTGTTCTGGCCGAAAGTCTCGCGGAAAATCCCCGGCCCGCTGATCGCCCTC
ATCGTCACCACCGTGGCCGTGCACATGCTGCATCTCCAGGTTGACACCATCGAAACCCGCTTCGGCGACATTTCGGCCTC
GATTCCCGCGCCGAGCTTTCCGTCGCTCGACATGGCGACCATCCGCCACCTCATCATGCCCGCCACCACCATTGCCCTGC
TCGGAGCCATCGAGGCGTTACTCTCGGCGGTGGTCGCCGACGGCATGATCGGCGCCCGACACAAGTCAAACATGGAGCTT
GTCGCTCAGGGCGTGGCGAACATCGTCTCGCCGCTCTTCGGCGGCATTCCCGTCACCGGCGCGATCGCCCGCACGGCGAC
CAACATCAAAAACGGCGGGCGGACACCGATTGCGGGCATCGTGCACGCCATCACGCTGCTCGGCATCATGCTGGTGTTCG
GCTCGTGGGCCAAGCTGATTCCGATGCCGACTCTGGCGGCGATTCTGATCGTGGTCGCCTGGAACATGAGCGAGCACCAC
GTCTTCCGACAGCTGCTCAAAAGCCCGAAGAGCGACGTGGCGGTGCTGCTGACCACCTTCGGCCTTACCGTGATCTTCGA
CCTCACCATCGCCATCGAGGTCGGCATGTTGCTCTCGGTGATCCTCTTCATGAAGCGCATGGCGAGTCTGGCCAACGTCG
GCGTCATCACCGGCGAGCTGAAGGACGAGGAGGACGAGGCCGATCCGAACGCCATCGTCAACCGGAGCATCCCTGAAGGC
GTGGATGTTTTCGAAATCAGTGGCCCGCTCTTTTTCGGTGCAGCCTCAAAGTTCAAAGATGCCATGCACGTGGTCGAGAA
GGCGCCGTCGATCCGGATTCTCAGAATGCGCAAGGTGATGAGCATCGATGCCACCGGCCTGAACATGCTGAAGGAGCTGT
TCAACGATTGCCGGAAATCGGGCACAACACTCATTCTTTCCGGAGTTCACACCCAGCCGCTCTTTGCGATGCAGCAATAC
GGCCTCGCGGATGAAATCGGCGAGGAGAACATCTTCGGGAACATCGACGACGCCCTCGACCGCGCGCGAAGCCTGCTCGG
CCTGCCCGTACAGGGACGCCCGGCGGGTTTCGTCGCCAGCGTCAAACGAGAGAAAGAGTTGCAGGCGAAGATCGAAAGCA
AAGGCTCCGGCAAGTAA

Upstream 100 bases:

>100_bases
GCACCAGTGCGGCAACGCTTGCCGGAAAGCTCTTGAACGAATCCCTGGCAGAATTCAAGGCTGACTGGGGAAAAGCAACC
CGACGACATCGTCAACCCGA

Downstream 100 bases:

>100_bases
CCCGCTCAAAGCAGATTCCCGCTCCGGCAACGTTCGGAGCGGGAATCTGGCATGGAAAGGGTGACGCGCCAGCAGAGCAA
ATCATGGTTCTTGGCGAACG

Product: sulfate transporter family protein

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 617

Protein sequence:

>618_residues
MSPESRTLPGIIRSGDPSICRPPVAGNCRSFTSDHFQQMFKPKLFTVLPELTKEQLGRDIVSGILVGIVALPLGIAFAIA
SGVSPEKGLISAVIGGFLISFLGGSRVQIGGPTGAFIVILYGIVQQYGLNGLMIATIMAGVILIIMGLSHLGSLIKFIPY
PVVVGFTSGIAIIIFSSEVKDFLGLHMASVPADFIDKWAAYFKALPTASPETILVGAVALLIIVFWPKVSRKIPGPLIAL
IVTTVAVHMLHLQVDTIETRFGDISASIPAPSFPSLDMATIRHLIMPATTIALLGAIEALLSAVVADGMIGARHKSNMEL
VAQGVANIVSPLFGGIPVTGAIARTATNIKNGGRTPIAGIVHAITLLGIMLVFGSWAKLIPMPTLAAILIVVAWNMSEHH
VFRQLLKSPKSDVAVLLTTFGLTVIFDLTIAIEVGMLLSVILFMKRMASLANVGVITGELKDEEDEADPNAIVNRSIPEG
VDVFEISGPLFFGAASKFKDAMHVVEKAPSIRILRMRKVMSIDATGLNMLKELFNDCRKSGTTLILSGVHTQPLFAMQQY
GLADEIGEENIFGNIDDALDRARSLLGLPVQGRPAGFVASVKREKELQAKIESKGSGK

Sequences:

>Translated_618_residues
MSPESRTLPGIIRSGDPSICRPPVAGNCRSFTSDHFQQMFKPKLFTVLPELTKEQLGRDIVSGILVGIVALPLGIAFAIA
SGVSPEKGLISAVIGGFLISFLGGSRVQIGGPTGAFIVILYGIVQQYGLNGLMIATIMAGVILIIMGLSHLGSLIKFIPY
PVVVGFTSGIAIIIFSSEVKDFLGLHMASVPADFIDKWAAYFKALPTASPETILVGAVALLIIVFWPKVSRKIPGPLIAL
IVTTVAVHMLHLQVDTIETRFGDISASIPAPSFPSLDMATIRHLIMPATTIALLGAIEALLSAVVADGMIGARHKSNMEL
VAQGVANIVSPLFGGIPVTGAIARTATNIKNGGRTPIAGIVHAITLLGIMLVFGSWAKLIPMPTLAAILIVVAWNMSEHH
VFRQLLKSPKSDVAVLLTTFGLTVIFDLTIAIEVGMLLSVILFMKRMASLANVGVITGELKDEEDEADPNAIVNRSIPEG
VDVFEISGPLFFGAASKFKDAMHVVEKAPSIRILRMRKVMSIDATGLNMLKELFNDCRKSGTTLILSGVHTQPLFAMQQY
GLADEIGEENIFGNIDDALDRARSLLGLPVQGRPAGFVASVKREKELQAKIESKGSGK
>Mature_617_residues
SPESRTLPGIIRSGDPSICRPPVAGNCRSFTSDHFQQMFKPKLFTVLPELTKEQLGRDIVSGILVGIVALPLGIAFAIAS
GVSPEKGLISAVIGGFLISFLGGSRVQIGGPTGAFIVILYGIVQQYGLNGLMIATIMAGVILIIMGLSHLGSLIKFIPYP
VVVGFTSGIAIIIFSSEVKDFLGLHMASVPADFIDKWAAYFKALPTASPETILVGAVALLIIVFWPKVSRKIPGPLIALI
VTTVAVHMLHLQVDTIETRFGDISASIPAPSFPSLDMATIRHLIMPATTIALLGAIEALLSAVVADGMIGARHKSNMELV
AQGVANIVSPLFGGIPVTGAIARTATNIKNGGRTPIAGIVHAITLLGIMLVFGSWAKLIPMPTLAAILIVVAWNMSEHHV
FRQLLKSPKSDVAVLLTTFGLTVIFDLTIAIEVGMLLSVILFMKRMASLANVGVITGELKDEEDEADPNAIVNRSIPEGV
DVFEISGPLFFGAASKFKDAMHVVEKAPSIRILRMRKVMSIDATGLNMLKELFNDCRKSGTTLILSGVHTQPLFAMQQYG
LADEIGEENIFGNIDDALDRARSLLGLPVQGRPAGFVASVKREKELQAKIESKGSGK

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=630, Percent_Identity=25.2380952380952, Blast_Score=138, Evalue=2e-32,
Organism=Homo sapiens, GI262206075, Length=630, Percent_Identity=25.2380952380952, Blast_Score=138, Evalue=2e-32,
Organism=Homo sapiens, GI262206069, Length=630, Percent_Identity=25.2380952380952, Blast_Score=138, Evalue=2e-32,
Organism=Homo sapiens, GI262206063, Length=630, Percent_Identity=25.2380952380952, Blast_Score=138, Evalue=2e-32,
Organism=Homo sapiens, GI94721259, Length=471, Percent_Identity=27.6008492569002, Blast_Score=126, Evalue=5e-29,
Organism=Homo sapiens, GI94721257, Length=472, Percent_Identity=28.1779661016949, Blast_Score=126, Evalue=7e-29,
Organism=Homo sapiens, GI94721253, Length=472, Percent_Identity=28.1779661016949, Blast_Score=126, Evalue=7e-29,
Organism=Homo sapiens, GI94721255, Length=472, Percent_Identity=28.1779661016949, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI20336282, Length=604, Percent_Identity=24.1721854304636, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI16306483, Length=604, Percent_Identity=24.1721854304636, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI4557535, Length=527, Percent_Identity=24.4781783681214, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI45827800, Length=485, Percent_Identity=23.0927835051546, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI39752683, Length=485, Percent_Identity=23.0927835051546, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI45827802, Length=424, Percent_Identity=24.0566037735849, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI269784651, Length=482, Percent_Identity=21.3692946058091, Blast_Score=90, Evalue=7e-18,
Organism=Homo sapiens, GI16418457, Length=489, Percent_Identity=23.3128834355828, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI301601599, Length=489, Percent_Identity=23.3128834355828, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI65506789, Length=549, Percent_Identity=24.408014571949, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI100913030, Length=507, Percent_Identity=23.4714003944773, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI4505697, Length=532, Percent_Identity=23.1203007518797, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI47131207, Length=639, Percent_Identity=20.9702660406886, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI20336272, Length=639, Percent_Identity=20.9702660406886, Blast_Score=78, Evalue=2e-14,
Organism=Escherichia coli, GI87081859, Length=553, Percent_Identity=39.6021699819168, Blast_Score=339, Evalue=3e-94,
Organism=Caenorhabditis elegans, GI86565215, Length=549, Percent_Identity=25.1366120218579, Blast_Score=115, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI86564196, Length=632, Percent_Identity=21.6772151898734, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17551690, Length=640, Percent_Identity=21.09375, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17566848, Length=578, Percent_Identity=23.8754325259516, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI193203292, Length=511, Percent_Identity=22.3091976516634, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI86564876, Length=424, Percent_Identity=23.1132075471698, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562578, Length=680, Percent_Identity=21.7647058823529, Blast_Score=81, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6325260, Length=576, Percent_Identity=24.3055555555556, Blast_Score=97, Evalue=6e-21,
Organism=Drosophila melanogaster, GI19922482, Length=457, Percent_Identity=27.1334792122538, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24649801, Length=486, Percent_Identity=24.8971193415638, Blast_Score=129, Evalue=7e-30,
Organism=Drosophila melanogaster, GI85815873, Length=560, Percent_Identity=25.8928571428571, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24651449, Length=480, Percent_Identity=24.375, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24663084, Length=430, Percent_Identity=25.5813953488372, Blast_Score=114, Evalue=3e-25,
Organism=Drosophila melanogaster, GI21357695, Length=430, Percent_Identity=25.5813953488372, Blast_Score=114, Evalue=3e-25,
Organism=Drosophila melanogaster, GI21358229, Length=481, Percent_Identity=25.1559251559252, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24647160, Length=145, Percent_Identity=33.7931034482759, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24666186, Length=401, Percent_Identity=25.6857855361596, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI21355087, Length=145, Percent_Identity=33.7931034482759, Blast_Score=83, Evalue=6e-16,
Organism=Drosophila melanogaster, GI21358633, Length=143, Percent_Identity=29.3706293706294, Blast_Score=67, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 65730; Mature: 65599

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPESRTLPGIIRSGDPSICRPPVAGNCRSFTSDHFQQMFKPKLFTVLPELTKEQLGRDI
CCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VSGILVGIVALPLGIAFAIASGVSPEKGLISAVIGGFLISFLGGSRVQIGGPTGAFIVIL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH
YGIVQQYGLNGLMIATIMAGVILIIMGLSHLGSLIKFIPYPVVVGFTSGIAIIIFSSEVK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEECHHHH
DFLGLHMASVPADFIDKWAAYFKALPTASPETILVGAVALLIIVFWPKVSRKIPGPLIAL
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IVTTVAVHMLHLQVDTIETRFGDISASIPAPSFPSLDMATIRHLIMPATTIALLGAIEAL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LSAVVADGMIGARHKSNMELVAQGVANIVSPLFGGIPVTGAIARTATNIKNGGRTPIAGI
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH
VHAITLLGIMLVFGSWAKLIPMPTLAAILIVVAWNMSEHHVFRQLLKSPKSDVAVLLTTF
HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHH
GLTVIFDLTIAIEVGMLLSVILFMKRMASLANVGVITGELKDEEDEADPNAIVNRSIPEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHCCCCCCCC
VDVFEISGPLFFGAASKFKDAMHVVEKAPSIRILRMRKVMSIDATGLNMLKELFNDCRKS
CCEEEECCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GTTLILSGVHTQPLFAMQQYGLADEIGEENIFGNIDDALDRARSLLGLPVQGRPAGFVAS
CCEEEEECCCCCHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH
VKREKELQAKIESKGSGK
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SPESRTLPGIIRSGDPSICRPPVAGNCRSFTSDHFQQMFKPKLFTVLPELTKEQLGRDI
CCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VSGILVGIVALPLGIAFAIASGVSPEKGLISAVIGGFLISFLGGSRVQIGGPTGAFIVIL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH
YGIVQQYGLNGLMIATIMAGVILIIMGLSHLGSLIKFIPYPVVVGFTSGIAIIIFSSEVK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEECHHHH
DFLGLHMASVPADFIDKWAAYFKALPTASPETILVGAVALLIIVFWPKVSRKIPGPLIAL
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IVTTVAVHMLHLQVDTIETRFGDISASIPAPSFPSLDMATIRHLIMPATTIALLGAIEAL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LSAVVADGMIGARHKSNMELVAQGVANIVSPLFGGIPVTGAIARTATNIKNGGRTPIAGI
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH
VHAITLLGIMLVFGSWAKLIPMPTLAAILIVVAWNMSEHHVFRQLLKSPKSDVAVLLTTF
HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHH
GLTVIFDLTIAIEVGMLLSVILFMKRMASLANVGVITGELKDEEDEADPNAIVNRSIPEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHCCCCCCCC
VDVFEISGPLFFGAASKFKDAMHVVEKAPSIRILRMRKVMSIDATGLNMLKELFNDCRKS
CCEEEECCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GTTLILSGVHTQPLFAMQQYGLADEIGEENIFGNIDDALDRARSLLGLPVQGRPAGFVAS
CCEEEEECCCCCHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH
VKREKELQAKIESKGSGK
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]