| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yvdB [H]
Identifier: 21673544
GI number: 21673544
Start: 695429
End: 697285
Strand: Reverse
Name: yvdB [H]
Synonym: CT0714
Alternate gene names: 21673544
Gene position: 697285-695429 (Counterclockwise)
Preceding gene: 21673548
Following gene: 21673542
Centisome position: 32.36
GC content: 60.74
Gene sequence:
>1857_bases ATGAGCCCGGAGAGTCGAACCCTTCCGGGCATTATCCGTTCGGGCGACCCGTCGATTTGCCGTCCGCCGGTGGCAGGGAA CTGCCGTTCCTTCACATCAGACCATTTCCAGCAAATGTTCAAACCAAAACTGTTTACCGTTCTTCCAGAGCTGACCAAGG AGCAGCTTGGCCGTGACATCGTGTCCGGAATTCTCGTCGGCATCGTGGCCCTGCCGCTTGGCATCGCCTTCGCCATTGCC TCGGGCGTTTCGCCCGAAAAGGGCCTCATCAGCGCCGTCATCGGCGGCTTCCTCATCTCCTTTCTCGGCGGCAGCCGCGT CCAGATCGGCGGGCCGACCGGTGCGTTCATCGTTATTCTCTACGGTATCGTGCAGCAGTACGGCCTCAACGGCCTCATGA TCGCCACCATCATGGCGGGCGTGATTCTTATCATCATGGGCCTGTCACACCTCGGCTCGCTCATCAAGTTCATCCCCTAT CCGGTCGTGGTTGGCTTCACCAGCGGCATCGCGATCATCATCTTTTCGAGTGAAGTCAAGGACTTTCTCGGTCTGCACAT GGCCAGCGTACCCGCCGACTTCATCGACAAGTGGGCCGCCTACTTCAAAGCCCTGCCGACGGCCAGCCCGGAGACGATTC TCGTCGGCGCGGTGGCCCTCTTGATTATCGTGTTCTGGCCGAAAGTCTCGCGGAAAATCCCCGGCCCGCTGATCGCCCTC ATCGTCACCACCGTGGCCGTGCACATGCTGCATCTCCAGGTTGACACCATCGAAACCCGCTTCGGCGACATTTCGGCCTC GATTCCCGCGCCGAGCTTTCCGTCGCTCGACATGGCGACCATCCGCCACCTCATCATGCCCGCCACCACCATTGCCCTGC TCGGAGCCATCGAGGCGTTACTCTCGGCGGTGGTCGCCGACGGCATGATCGGCGCCCGACACAAGTCAAACATGGAGCTT GTCGCTCAGGGCGTGGCGAACATCGTCTCGCCGCTCTTCGGCGGCATTCCCGTCACCGGCGCGATCGCCCGCACGGCGAC CAACATCAAAAACGGCGGGCGGACACCGATTGCGGGCATCGTGCACGCCATCACGCTGCTCGGCATCATGCTGGTGTTCG GCTCGTGGGCCAAGCTGATTCCGATGCCGACTCTGGCGGCGATTCTGATCGTGGTCGCCTGGAACATGAGCGAGCACCAC GTCTTCCGACAGCTGCTCAAAAGCCCGAAGAGCGACGTGGCGGTGCTGCTGACCACCTTCGGCCTTACCGTGATCTTCGA CCTCACCATCGCCATCGAGGTCGGCATGTTGCTCTCGGTGATCCTCTTCATGAAGCGCATGGCGAGTCTGGCCAACGTCG GCGTCATCACCGGCGAGCTGAAGGACGAGGAGGACGAGGCCGATCCGAACGCCATCGTCAACCGGAGCATCCCTGAAGGC GTGGATGTTTTCGAAATCAGTGGCCCGCTCTTTTTCGGTGCAGCCTCAAAGTTCAAAGATGCCATGCACGTGGTCGAGAA GGCGCCGTCGATCCGGATTCTCAGAATGCGCAAGGTGATGAGCATCGATGCCACCGGCCTGAACATGCTGAAGGAGCTGT TCAACGATTGCCGGAAATCGGGCACAACACTCATTCTTTCCGGAGTTCACACCCAGCCGCTCTTTGCGATGCAGCAATAC GGCCTCGCGGATGAAATCGGCGAGGAGAACATCTTCGGGAACATCGACGACGCCCTCGACCGCGCGCGAAGCCTGCTCGG CCTGCCCGTACAGGGACGCCCGGCGGGTTTCGTCGCCAGCGTCAAACGAGAGAAAGAGTTGCAGGCGAAGATCGAAAGCA AAGGCTCCGGCAAGTAA
Upstream 100 bases:
>100_bases GCACCAGTGCGGCAACGCTTGCCGGAAAGCTCTTGAACGAATCCCTGGCAGAATTCAAGGCTGACTGGGGAAAAGCAACC CGACGACATCGTCAACCCGA
Downstream 100 bases:
>100_bases CCCGCTCAAAGCAGATTCCCGCTCCGGCAACGTTCGGAGCGGGAATCTGGCATGGAAAGGGTGACGCGCCAGCAGAGCAA ATCATGGTTCTTGGCGAACG
Product: sulfate transporter family protein
Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 617
Protein sequence:
>618_residues MSPESRTLPGIIRSGDPSICRPPVAGNCRSFTSDHFQQMFKPKLFTVLPELTKEQLGRDIVSGILVGIVALPLGIAFAIA SGVSPEKGLISAVIGGFLISFLGGSRVQIGGPTGAFIVILYGIVQQYGLNGLMIATIMAGVILIIMGLSHLGSLIKFIPY PVVVGFTSGIAIIIFSSEVKDFLGLHMASVPADFIDKWAAYFKALPTASPETILVGAVALLIIVFWPKVSRKIPGPLIAL IVTTVAVHMLHLQVDTIETRFGDISASIPAPSFPSLDMATIRHLIMPATTIALLGAIEALLSAVVADGMIGARHKSNMEL VAQGVANIVSPLFGGIPVTGAIARTATNIKNGGRTPIAGIVHAITLLGIMLVFGSWAKLIPMPTLAAILIVVAWNMSEHH VFRQLLKSPKSDVAVLLTTFGLTVIFDLTIAIEVGMLLSVILFMKRMASLANVGVITGELKDEEDEADPNAIVNRSIPEG VDVFEISGPLFFGAASKFKDAMHVVEKAPSIRILRMRKVMSIDATGLNMLKELFNDCRKSGTTLILSGVHTQPLFAMQQY GLADEIGEENIFGNIDDALDRARSLLGLPVQGRPAGFVASVKREKELQAKIESKGSGK
Sequences:
>Translated_618_residues MSPESRTLPGIIRSGDPSICRPPVAGNCRSFTSDHFQQMFKPKLFTVLPELTKEQLGRDIVSGILVGIVALPLGIAFAIA SGVSPEKGLISAVIGGFLISFLGGSRVQIGGPTGAFIVILYGIVQQYGLNGLMIATIMAGVILIIMGLSHLGSLIKFIPY PVVVGFTSGIAIIIFSSEVKDFLGLHMASVPADFIDKWAAYFKALPTASPETILVGAVALLIIVFWPKVSRKIPGPLIAL IVTTVAVHMLHLQVDTIETRFGDISASIPAPSFPSLDMATIRHLIMPATTIALLGAIEALLSAVVADGMIGARHKSNMEL VAQGVANIVSPLFGGIPVTGAIARTATNIKNGGRTPIAGIVHAITLLGIMLVFGSWAKLIPMPTLAAILIVVAWNMSEHH VFRQLLKSPKSDVAVLLTTFGLTVIFDLTIAIEVGMLLSVILFMKRMASLANVGVITGELKDEEDEADPNAIVNRSIPEG VDVFEISGPLFFGAASKFKDAMHVVEKAPSIRILRMRKVMSIDATGLNMLKELFNDCRKSGTTLILSGVHTQPLFAMQQY GLADEIGEENIFGNIDDALDRARSLLGLPVQGRPAGFVASVKREKELQAKIESKGSGK >Mature_617_residues SPESRTLPGIIRSGDPSICRPPVAGNCRSFTSDHFQQMFKPKLFTVLPELTKEQLGRDIVSGILVGIVALPLGIAFAIAS GVSPEKGLISAVIGGFLISFLGGSRVQIGGPTGAFIVILYGIVQQYGLNGLMIATIMAGVILIIMGLSHLGSLIKFIPYP VVVGFTSGIAIIIFSSEVKDFLGLHMASVPADFIDKWAAYFKALPTASPETILVGAVALLIIVFWPKVSRKIPGPLIALI VTTVAVHMLHLQVDTIETRFGDISASIPAPSFPSLDMATIRHLIMPATTIALLGAIEALLSAVVADGMIGARHKSNMELV AQGVANIVSPLFGGIPVTGAIARTATNIKNGGRTPIAGIVHAITLLGIMLVFGSWAKLIPMPTLAAILIVVAWNMSEHHV FRQLLKSPKSDVAVLLTTFGLTVIFDLTIAIEVGMLLSVILFMKRMASLANVGVITGELKDEEDEADPNAIVNRSIPEGV DVFEISGPLFFGAASKFKDAMHVVEKAPSIRILRMRKVMSIDATGLNMLKELFNDCRKSGTTLILSGVHTQPLFAMQQYG LADEIGEENIFGNIDDALDRARSLLGLPVQGRPAGFVASVKREKELQAKIESKGSGK
Specific function: Possible Sulfate Transporter. [C]
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Homo sapiens, GI262206105, Length=630, Percent_Identity=25.2380952380952, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI262206075, Length=630, Percent_Identity=25.2380952380952, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI262206069, Length=630, Percent_Identity=25.2380952380952, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI262206063, Length=630, Percent_Identity=25.2380952380952, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI94721259, Length=471, Percent_Identity=27.6008492569002, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI94721257, Length=472, Percent_Identity=28.1779661016949, Blast_Score=126, Evalue=7e-29, Organism=Homo sapiens, GI94721253, Length=472, Percent_Identity=28.1779661016949, Blast_Score=126, Evalue=7e-29, Organism=Homo sapiens, GI94721255, Length=472, Percent_Identity=28.1779661016949, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI20336282, Length=604, Percent_Identity=24.1721854304636, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI16306483, Length=604, Percent_Identity=24.1721854304636, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI4557535, Length=527, Percent_Identity=24.4781783681214, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI45827800, Length=485, Percent_Identity=23.0927835051546, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI39752683, Length=485, Percent_Identity=23.0927835051546, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI45827802, Length=424, Percent_Identity=24.0566037735849, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI269784651, Length=482, Percent_Identity=21.3692946058091, Blast_Score=90, Evalue=7e-18, Organism=Homo sapiens, GI16418457, Length=489, Percent_Identity=23.3128834355828, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI301601599, Length=489, Percent_Identity=23.3128834355828, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI65506789, Length=549, Percent_Identity=24.408014571949, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI100913030, Length=507, Percent_Identity=23.4714003944773, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI4505697, Length=532, Percent_Identity=23.1203007518797, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI47131207, Length=639, Percent_Identity=20.9702660406886, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI20336272, Length=639, Percent_Identity=20.9702660406886, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI87081859, Length=553, Percent_Identity=39.6021699819168, Blast_Score=339, Evalue=3e-94, Organism=Caenorhabditis elegans, GI86565215, Length=549, Percent_Identity=25.1366120218579, Blast_Score=115, Evalue=1e-25, Organism=Caenorhabditis elegans, GI86564196, Length=632, Percent_Identity=21.6772151898734, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17551690, Length=640, Percent_Identity=21.09375, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17566848, Length=578, Percent_Identity=23.8754325259516, Blast_Score=99, Evalue=6e-21, Organism=Caenorhabditis elegans, GI193203292, Length=511, Percent_Identity=22.3091976516634, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI86564876, Length=424, Percent_Identity=23.1132075471698, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562578, Length=680, Percent_Identity=21.7647058823529, Blast_Score=81, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6325260, Length=576, Percent_Identity=24.3055555555556, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI19922482, Length=457, Percent_Identity=27.1334792122538, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24649801, Length=486, Percent_Identity=24.8971193415638, Blast_Score=129, Evalue=7e-30, Organism=Drosophila melanogaster, GI85815873, Length=560, Percent_Identity=25.8928571428571, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24651449, Length=480, Percent_Identity=24.375, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI24663084, Length=430, Percent_Identity=25.5813953488372, Blast_Score=114, Evalue=3e-25, Organism=Drosophila melanogaster, GI21357695, Length=430, Percent_Identity=25.5813953488372, Blast_Score=114, Evalue=3e-25, Organism=Drosophila melanogaster, GI21358229, Length=481, Percent_Identity=25.1559251559252, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24647160, Length=145, Percent_Identity=33.7931034482759, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI24666186, Length=401, Percent_Identity=25.6857855361596, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI21355087, Length=145, Percent_Identity=33.7931034482759, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI21358633, Length=143, Percent_Identity=29.3706293706294, Blast_Score=67, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002645 - InterPro: IPR001902 - InterPro: IPR011547 [H]
Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]
EC number: NA
Molecular weight: Translated: 65730; Mature: 65599
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPESRTLPGIIRSGDPSICRPPVAGNCRSFTSDHFQQMFKPKLFTVLPELTKEQLGRDI CCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VSGILVGIVALPLGIAFAIASGVSPEKGLISAVIGGFLISFLGGSRVQIGGPTGAFIVIL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH YGIVQQYGLNGLMIATIMAGVILIIMGLSHLGSLIKFIPYPVVVGFTSGIAIIIFSSEVK HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEECHHHH DFLGLHMASVPADFIDKWAAYFKALPTASPETILVGAVALLIIVFWPKVSRKIPGPLIAL HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IVTTVAVHMLHLQVDTIETRFGDISASIPAPSFPSLDMATIRHLIMPATTIALLGAIEAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LSAVVADGMIGARHKSNMELVAQGVANIVSPLFGGIPVTGAIARTATNIKNGGRTPIAGI HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH VHAITLLGIMLVFGSWAKLIPMPTLAAILIVVAWNMSEHHVFRQLLKSPKSDVAVLLTTF HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHH GLTVIFDLTIAIEVGMLLSVILFMKRMASLANVGVITGELKDEEDEADPNAIVNRSIPEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHCCCCCCCC VDVFEISGPLFFGAASKFKDAMHVVEKAPSIRILRMRKVMSIDATGLNMLKELFNDCRKS CCEEEECCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC GTTLILSGVHTQPLFAMQQYGLADEIGEENIFGNIDDALDRARSLLGLPVQGRPAGFVAS CCEEEEECCCCCHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH VKREKELQAKIESKGSGK HHHHHHHHHHHHCCCCCC >Mature Secondary Structure SPESRTLPGIIRSGDPSICRPPVAGNCRSFTSDHFQQMFKPKLFTVLPELTKEQLGRDI CCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VSGILVGIVALPLGIAFAIASGVSPEKGLISAVIGGFLISFLGGSRVQIGGPTGAFIVIL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH YGIVQQYGLNGLMIATIMAGVILIIMGLSHLGSLIKFIPYPVVVGFTSGIAIIIFSSEVK HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEECHHHH DFLGLHMASVPADFIDKWAAYFKALPTASPETILVGAVALLIIVFWPKVSRKIPGPLIAL HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IVTTVAVHMLHLQVDTIETRFGDISASIPAPSFPSLDMATIRHLIMPATTIALLGAIEAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LSAVVADGMIGARHKSNMELVAQGVANIVSPLFGGIPVTGAIARTATNIKNGGRTPIAGI HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH VHAITLLGIMLVFGSWAKLIPMPTLAAILIVVAWNMSEHHVFRQLLKSPKSDVAVLLTTF HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHH GLTVIFDLTIAIEVGMLLSVILFMKRMASLANVGVITGELKDEEDEADPNAIVNRSIPEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHCCCCCCCC VDVFEISGPLFFGAASKFKDAMHVVEKAPSIRILRMRKVMSIDATGLNMLKELFNDCRKS CCEEEECCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC GTTLILSGVHTQPLFAMQQYGLADEIGEENIFGNIDDALDRARSLLGLPVQGRPAGFVAS CCEEEEECCCCCHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH VKREKELQAKIESKGSGK HHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]
Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]