| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is groES-2
Identifier: 21673404
GI number: 21673404
Start: 577367
End: 577762
Strand: Direct
Name: groES-2
Synonym: CT0569
Alternate gene names: NA
Gene position: 577367-577762 (Clockwise)
Preceding gene: 21673395
Following gene: 21673405
Centisome position: 26.79
GC content: 51.77
Gene sequence:
>396_bases ATGTTATTTGACAAACGCAAAAATGTCACGGATAAATTTATCGTTGTCGGAGACCGGGTACTGATCAAGCCGAAATCCCT CGATGAGACAACCAAATCAGGTATCTACCTTCCTCCGGGCGTTCAGGAAAAAGCTAAAATCCAGAGCGGCTACGTGCTCA AAACAGGGCCCGGCTATCCGGTCGGCCCGCCAAATGATACCGACGAACCCTGGAAAGAGCGGGCCGAAAGCCCCCAGTAT ATTCCGCTTCAGGCCAAAACCGGCGATCTGGCTATCTTCGTCCAGAGCAGTGCCTGGGAGATCGAGTACGAAGAGGAGCG CTATCTGATCGTGCCCAATTCAGCCATTCTTTTGCTGATCAGGGAAGACGATGACCTGGAAGACTCTCTGAGTTGA
Upstream 100 bases:
>100_bases CCGGTTGCGGAAAAACGCGCGAAACCCGGCGGTGATTACCGTTTGACCCGATCCGGTCTTCCGGCCTACGGGAATCCTCG CCAAGATATTGCAACAGCGC
Downstream 100 bases:
>100_bases ATCGTCGGAGGGAGTCGGATTTGTTTCCGGCTTTCACTCCGGCCTACGCTCCTCTTCAACCGTCGAGGAGTTTTTTTATT TCATTATTTTGACAGATCGA
Product: chaperonin, 10 kDa
Products: NA
Alternate protein names: Chaperonin; Chaperonin GroS
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLFDKRKNVTDKFIVVGDRVLIKPKSLDETTKSGIYLPPGVQEKAKIQSGYVLKTGPGYPVGPPNDTDEPWKERAESPQY IPLQAKTGDLAIFVQSSAWEIEYEEERYLIVPNSAILLLIREDDDLEDSLS
Sequences:
>Translated_131_residues MLFDKRKNVTDKFIVVGDRVLIKPKSLDETTKSGIYLPPGVQEKAKIQSGYVLKTGPGYPVGPPNDTDEPWKERAESPQY IPLQAKTGDLAIFVQSSAWEIEYEEERYLIVPNSAILLLIREDDDLEDSLS >Mature_131_residues MLFDKRKNVTDKFIVVGDRVLIKPKSLDETTKSGIYLPPGVQEKAKIQSGYVLKTGPGYPVGPPNDTDEPWKERAESPQY IPLQAKTGDLAIFVQSSAWEIEYEEERYLIVPNSAILLLIREDDDLEDSLS
Specific function: Unknown
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14768; Mature: 14768
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFDKRKNVTDKFIVVGDRVLIKPKSLDETTKSGIYLPPGVQEKAKIQSGYVLKTGPGYP CCCCCCCCCCCEEEEECCEEEECCCCCCCHHHCCEECCCCCCCHHCCCCCEEEECCCCCC VGPPNDTDEPWKERAESPQYIPLQAKTGDLAIFVQSSAWEIEYEEERYLIVPNSAILLLI CCCCCCCCCHHHHHCCCCCEEEEEECCCCEEEEEECCCEEEEECCCEEEEECCCEEEEEE REDDDLEDSLS ECCCCCCCCCC >Mature Secondary Structure MLFDKRKNVTDKFIVVGDRVLIKPKSLDETTKSGIYLPPGVQEKAKIQSGYVLKTGPGYP CCCCCCCCCCCEEEEECCEEEECCCCCCCHHHCCEECCCCCCCHHCCCCCEEEECCCCCC VGPPNDTDEPWKERAESPQYIPLQAKTGDLAIFVQSSAWEIEYEEERYLIVPNSAILLLI CCCCCCCCCHHHHHCCCCCEEEEEECCCCEEEEEECCCEEEEECCCEEEEECCCEEEEEE REDDDLEDSLS ECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA