| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21673374
Identifier: 21673374
GI number: 21673374
Start: 546268
End: 546411
Strand: Reverse
Name: 21673374
Synonym: CT0539
Alternate gene names: NA
Gene position: 546411-546268 (Counterclockwise)
Preceding gene: 21673375
Following gene: 21673373
Centisome position: 25.36
GC content: 48.61
Gene sequence:
>144_bases ATGACGACAGAAGCCATGATGAAGTCTGACAGCCTCCCCGTCGAAATCACCAGAAACGGTGATTGCCATTTTGCAGCAAA TCGTTATGTTCGGTCAACTTGCAACATTCACCATCAGCCGGAATTCCACCCGTTAACCCGATGA
Upstream 100 bases:
>100_bases AAACCCGCCCCTACGATCGAGAAGAACAGGGTTTTTCGCGGGATAGATAATCATATTCACGGTTCATGCGCGGTATCCAA CCGGATACGGGAGGCTCGCG
Downstream 100 bases:
>100_bases GCAACCACGAAGAGAAAAAGCAACATGTCGCCCTCAGTTCGGTCGCGGCGAGCCTGTTGTTGACAGCGATGAAACTCGTG GTCGGTCTCATGACCGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MTTEAMMKSDSLPVEITRNGDCHFAANRYVRSTCNIHHQPEFHPLTR
Sequences:
>Translated_47_residues MTTEAMMKSDSLPVEITRNGDCHFAANRYVRSTCNIHHQPEFHPLTR >Mature_46_residues TTEAMMKSDSLPVEITRNGDCHFAANRYVRSTCNIHHQPEFHPLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5444; Mature: 5313
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEAMMKSDSLPVEITRNGDCHFAANRYVRSTCNIHHQPEFHPLTR CCCCCCCCCCCCCEEEECCCCEEEECCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TTEAMMKSDSLPVEITRNGDCHFAANRYVRSTCNIHHQPEFHPLTR CCCCCCCCCCCCEEEECCCCEEEECCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA