| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is fieF [H]
Identifier: 21673373
GI number: 21673373
Start: 544880
End: 546271
Strand: Reverse
Name: fieF [H]
Synonym: CT0538
Alternate gene names: 21673373
Gene position: 546271-544880 (Counterclockwise)
Preceding gene: 21673374
Following gene: 21673372
Centisome position: 25.35
GC content: 58.48
Gene sequence:
>1392_bases ATGAGCAACCACGAAGAGAAAAAGCAACATGTCGCCCTCAGTTCGGTCGCGGCGAGCCTGTTGTTGACAGCGATGAAACT CGTGGTCGGTCTCATGACCGGCAGCATCGGCATCCTCTCCGAGGCCGCGCACTCGGCGATAGATTTCGGCGCAGCGGCAC TGACCTGGTTCGCCGTCAGAATCAGCGACAAACCGGCGGATAAAAAGCACCACTACGGACACACCAAAATCGAAAGCGTC AGCGCACTCATCGAAACCGGCCTGCTGATACTCACCTCGGTCTGGATTATCTATGAGGCCGTGACGCGACTCCTTTCCGG CACAACGGAGATCGAAGTCACCTGGTACGCTATCGCCGTTATCATTATCTCGATCATTGTGGATATATCGAGAGCTTCCG CCCTGAAAAAAGTGGCCAAAGAGACCAAAAGCCAGGCCCTCGAAGCCGACGCGCTGCACTTCACCTCCGACATCGTCTCC TCGGCGGTGGTGCTCGCGGGACTTGGCTTCGTCGCGCTTGGCATGCACTGGGCGGACGCTGTCGCGGGTATTTTTGTGGC GGTGCTGGTCGGCAAGGCTGCATGGGAGCTGGGCCGGAAAACCATTGACGTCCTGATTGACACCGCTCCCGAGGGACTCT CCGAACAGATCGAAGAGATCGTCGTGAATGCGCCGGGCGTCATCGGCATCAACAAGATGCGAATCAAACCTGCCGGAGGA CCGTTCGTCTTTATCGACCTCACCATCTCGGTCAGCCGCACCTTGCCGCAGGAAAAAGTTGTGGCCATCTGCGCCGGAGT CGAACAGCGGCTGAAGGCAGCGCTTCCCGACAGCGACATCACGGTCAACGCGCGACCGGTGGTGCTCGACAGCGAAACCG TCACCGAGCGGATTCACACCATCGGCCTGAACCACGGCCTGCACGCGCACAACATACTCACCTCGCTCTCGGGCGACCAC AAGCAGATCACCTTCGACGTCGAGGTCGACAGTCGCCTGACCATCAGGCAGGCGCACGACGCTGTAACGGAGCTTGAAAA TGAGCTGCACCGGGAATTCAACGAAGAGATCGACCTCTGCATCCATCTCGATCCGATCAACAGCGAAGAACGCAATGTCC AGCCTGCCGACCCCGAAAACGAAGCGAGAATCACTGCCCTCATCCGGCAAGCGGCCAGCACGATTCCCGGCATCCTCAAC GTGCACGCCCTTAAAATCCACGTTTTGAGCTACAACAAACTCTGCATCACGCTGCATTGCGGCTTCGACGACAACACTGT GCTCGCCGACGTCCACCCGCTCACCAGCCGCCTCGAATGCCTGATCTACCGGGATATTCCCGAAACATCCAGAATCATCG TCCACGCCGAGCCAGTAAACGCCGGGGATTGA
Upstream 100 bases:
>100_bases TCGAAATCACCAGAAACGGTGATTGCCATTTTGCAGCAAATCGTTATGTTCGGTCAACTTGCAACATTCACCATCAGCCG GAATTCCACCCGTTAACCCG
Downstream 100 bases:
>100_bases GACACGAGCTTGACAACCCCCATGCACACGCCACCAACAATCCTTGCATTCGATGTTTACGGCACGCTGATCGATACGCA CGGGCTGTGGTGTCGATGCT
Product: cation efflux family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MSNHEEKKQHVALSSVAASLLLTAMKLVVGLMTGSIGILSEAAHSAIDFGAAALTWFAVRISDKPADKKHHYGHTKIESV SALIETGLLILTSVWIIYEAVTRLLSGTTEIEVTWYAIAVIIISIIVDISRASALKKVAKETKSQALEADALHFTSDIVS SAVVLAGLGFVALGMHWADAVAGIFVAVLVGKAAWELGRKTIDVLIDTAPEGLSEQIEEIVVNAPGVIGINKMRIKPAGG PFVFIDLTISVSRTLPQEKVVAICAGVEQRLKAALPDSDITVNARPVVLDSETVTERIHTIGLNHGLHAHNILTSLSGDH KQITFDVEVDSRLTIRQAHDAVTELENELHREFNEEIDLCIHLDPINSEERNVQPADPENEARITALIRQAASTIPGILN VHALKIHVLSYNKLCITLHCGFDDNTVLADVHPLTSRLECLIYRDIPETSRIIVHAEPVNAGD
Sequences:
>Translated_463_residues MSNHEEKKQHVALSSVAASLLLTAMKLVVGLMTGSIGILSEAAHSAIDFGAAALTWFAVRISDKPADKKHHYGHTKIESV SALIETGLLILTSVWIIYEAVTRLLSGTTEIEVTWYAIAVIIISIIVDISRASALKKVAKETKSQALEADALHFTSDIVS SAVVLAGLGFVALGMHWADAVAGIFVAVLVGKAAWELGRKTIDVLIDTAPEGLSEQIEEIVVNAPGVIGINKMRIKPAGG PFVFIDLTISVSRTLPQEKVVAICAGVEQRLKAALPDSDITVNARPVVLDSETVTERIHTIGLNHGLHAHNILTSLSGDH KQITFDVEVDSRLTIRQAHDAVTELENELHREFNEEIDLCIHLDPINSEERNVQPADPENEARITALIRQAASTIPGILN VHALKIHVLSYNKLCITLHCGFDDNTVLADVHPLTSRLECLIYRDIPETSRIIVHAEPVNAGD >Mature_462_residues SNHEEKKQHVALSSVAASLLLTAMKLVVGLMTGSIGILSEAAHSAIDFGAAALTWFAVRISDKPADKKHHYGHTKIESVS ALIETGLLILTSVWIIYEAVTRLLSGTTEIEVTWYAIAVIIISIIVDISRASALKKVAKETKSQALEADALHFTSDIVSS AVVLAGLGFVALGMHWADAVAGIFVAVLVGKAAWELGRKTIDVLIDTAPEGLSEQIEEIVVNAPGVIGINKMRIKPAGGP FVFIDLTISVSRTLPQEKVVAICAGVEQRLKAALPDSDITVNARPVVLDSETVTERIHTIGLNHGLHAHNILTSLSGDHK QITFDVEVDSRLTIRQAHDAVTELENELHREFNEEIDLCIHLDPINSEERNVQPADPENEARITALIRQAASTIPGILNV HALKIHVLSYNKLCITLHCGFDDNTVLADVHPLTSRLECLIYRDIPETSRIIVHAEPVNAGD
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=267, Percent_Identity=29.9625468164794, Blast_Score=129, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 50120; Mature: 49989
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHEEKKQHVALSSVAASLLLTAMKLVVGLMTGSIGILSEAAHSAIDFGAAALTWFAVR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEE ISDKPADKKHHYGHTKIESVSALIETGLLILTSVWIIYEAVTRLLSGTTEIEVTWYAIAV ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH IIISIIVDISRASALKKVAKETKSQALEADALHFTSDIVSSAVVLAGLGFVALGMHWADA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAGIFVAVLVGKAAWELGRKTIDVLIDTAPEGLSEQIEEIVVNAPGVIGINKMRIKPAGG HHHHHHHHHHHHHHHHHCHHEEEHEEECCCCHHHHHHHHHHHCCCCEEECEEEEEEECCC PFVFIDLTISVSRTLPQEKVVAICAGVEQRLKAALPDSDITVNARPVVLDSETVTERIHT CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHHHHHHHHH IGLNHGLHAHNILTSLSGDHKQITFDVEVDSRLTIRQAHDAVTELENELHREFNEEIDLC HCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHCCCEEEE IHLDPINSEERNVQPADPENEARITALIRQAASTIPGILNVHALKIHVLSYNKLCITLHC EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEEEEEEEEEECCEEEEEEE GFDDNTVLADVHPLTSRLECLIYRDIPETSRIIVHAEPVNAGD CCCCCEEEEECCHHHHHCEEEEEECCCCCCEEEEEECCCCCCC >Mature Secondary Structure SNHEEKKQHVALSSVAASLLLTAMKLVVGLMTGSIGILSEAAHSAIDFGAAALTWFAVR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEE ISDKPADKKHHYGHTKIESVSALIETGLLILTSVWIIYEAVTRLLSGTTEIEVTWYAIAV ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH IIISIIVDISRASALKKVAKETKSQALEADALHFTSDIVSSAVVLAGLGFVALGMHWADA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAGIFVAVLVGKAAWELGRKTIDVLIDTAPEGLSEQIEEIVVNAPGVIGINKMRIKPAGG HHHHHHHHHHHHHHHHHCHHEEEHEEECCCCHHHHHHHHHHHCCCCEEECEEEEEEECCC PFVFIDLTISVSRTLPQEKVVAICAGVEQRLKAALPDSDITVNARPVVLDSETVTERIHT CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHHHHHHHHH IGLNHGLHAHNILTSLSGDHKQITFDVEVDSRLTIRQAHDAVTELENELHREFNEEIDLC HCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHCCCEEEE IHLDPINSEERNVQPADPENEARITALIRQAASTIPGILNVHALKIHVLSYNKLCITLHC EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEEEEEEEEEECCEEEEEEE GFDDNTVLADVHPLTSRLECLIYRDIPETSRIIVHAEPVNAGD CCCCCEEEEECCHHHHHCEEEEEECCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA