| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673363
Identifier: 21673363
GI number: 21673363
Start: 535868
End: 536179
Strand: Reverse
Name: 21673363
Synonym: CT0528
Alternate gene names: NA
Gene position: 536179-535868 (Counterclockwise)
Preceding gene: 21673366
Following gene: 21673359
Centisome position: 24.88
GC content: 53.21
Gene sequence:
>312_bases ATGACTTCAGATGATCGTAACAAAAGAAATCCCGAAACACTCGGCGCTATTGGCAAGGTTACGCTGGAAAAACTGGCAAG CCTCTCCTCGAAAATCAGGGATGACGTCGCGACCGAGGCTGACAGGGTCAACCATGAAATCCTTTCCGAAATCGTAGCGC TCGCATCAAACCGGGTGTCGGTCGAAAAAAACGAATCAATTCTCAAAGAGGGCGGCAGCGCCTGGACGGAACGCACCGAA TCACACTACCCACACATCCGCCTCCACGGCGGCGCGCTTGAAGATGATCCGCTGAAGATGATGATCCGCTGA
Upstream 100 bases:
>100_bases AGAGTGCTAATACAGGAACAATTATAAAAAAATTTTTCCGGGGCGCAAATATTTTTTTATCCTGAAAACACCTCGAAACC CTGAAACCAGAGCCTTTGAT
Downstream 100 bases:
>100_bases AGATGAATATTTGAGGAGAAGGACAACAGTGTGAAAACGGTTTCTTCGTCCCTGAAGTCCTTTTCTTTCTACAAATACCC CCGCAAATGCCTCCCCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTSDDRNKRNPETLGAIGKVTLEKLASLSSKIRDDVATEADRVNHEILSEIVALASNRVSVEKNESILKEGGSAWTERTE SHYPHIRLHGGALEDDPLKMMIR
Sequences:
>Translated_103_residues MTSDDRNKRNPETLGAIGKVTLEKLASLSSKIRDDVATEADRVNHEILSEIVALASNRVSVEKNESILKEGGSAWTERTE SHYPHIRLHGGALEDDPLKMMIR >Mature_102_residues TSDDRNKRNPETLGAIGKVTLEKLASLSSKIRDDVATEADRVNHEILSEIVALASNRVSVEKNESILKEGGSAWTERTES HYPHIRLHGGALEDDPLKMMIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11451; Mature: 11320
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDDRNKRNPETLGAIGKVTLEKLASLSSKIRDDVATEADRVNHEILSEIVALASNRVS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VEKNESILKEGGSAWTERTESHYPHIRLHGGALEDDPLKMMIR CCCHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHCC >Mature Secondary Structure TSDDRNKRNPETLGAIGKVTLEKLASLSSKIRDDVATEADRVNHEILSEIVALASNRVS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VEKNESILKEGGSAWTERTESHYPHIRLHGGALEDDPLKMMIR CCCHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA