| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673279
Identifier: 21673279
GI number: 21673279
Start: 461452
End: 462405
Strand: Direct
Name: 21673279
Synonym: CT0441
Alternate gene names: NA
Gene position: 461452-462405 (Clockwise)
Preceding gene: 21673278
Following gene: 21673280
Centisome position: 21.41
GC content: 57.34
Gene sequence:
>954_bases ATGGCTCTACCCTCCGTCGTTTTACCTCGTTGTACTGCCGCTGGCGTTACTGCCGTATCTGGTGGCATACTGGACCTTCA TGTTGTCAACTCTGGCGGCTATCTTCTGGTGTTGCGTCGTCTCGTCCGTGGCAAGACGGCGATGTGGTGTCTTGCCGGTT TCTCCGGATTGTGGGGAAACCTCTATTGCGGCCAGAACGGCTTTCTGACCGCGGCCATCGCCGGGATAGCACTGCTCAGC CTTGAGCGTCGGCCTGTTCTGGCGGGAGTGTTTATCGGTCTGCTTGCCATCAAACCGCATCTTGCGGTGCTTTTTCCGGT GGCGCTACTCGCCATTGGGGCGTGGCGGACGTTGATAACCGCCGCCGTGACGGCAATTACGTTTATGGCTATTGGTACGC TAACCCTTGGAACCGCTGTCCTGAAGGCGTTTTTCGCGAGTCTGGGCGATGCCCGGCATTTATGTCTTGAAAACGGATCT CTTCTCTGGAAGAAAATGCCTTCGGTGTTTGCGTTTCTGCGCCTGCTCGGCACGCCCGTCACCTGGGCGTATGTTGTTCA TTGTATCGTTGCAGCGGTGGCGGTGATCGCTGTCTGGCAGGTCTGGCGTCATTGTCAGAACTGGAACCTGCGCGGAGCAG CCCTGATGACGGCAACCTTTCTGGTCAGCCCGTACGCGTATGATTACGATCTGGCATGGCTGGCCTTTCCGATTGCATGG CTGGCAGTGGACGGGTTGCGCAACGGCTGGCTGCGTGGAGAGCGTGAAGCGCTTGTGGCGGCATGGTTGATGCCGTTGCT GATGAGTCCAATAGCCGGGGCTCTAAAATTTCAGATAGGGCCGCTGGTGCTTTGCAGTCTGTTGTGGATTACGGTGCGTC GGGCCAATGCGGCATCGATGATGGGTGGTATGGCAACCGACGCTTATGCTGATCAGTTTGAGCCGCTACCGTAA
Upstream 100 bases:
>100_bases CGCATCTTGCCTTGACGGGACATGCTCAGGACGCCTACAACAGTTCCTTGCTGTTAAAGACTGAACAACTTGTTACACCG GCATTCAAGGGCCGTTATAT
Downstream 100 bases:
>100_bases AGAGAACTTGCTATGCCTGGCTTTGTAAGGCACTCCAACGATGCTGGAAAATATCCAAACACACAATGGCAGGAAATGCT ATGAAAACACAAGCGCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MALPSVVLPRCTAAGVTAVSGGILDLHVVNSGGYLLVLRRLVRGKTAMWCLAGFSGLWGNLYCGQNGFLTAAIAGIALLS LERRPVLAGVFIGLLAIKPHLAVLFPVALLAIGAWRTLITAAVTAITFMAIGTLTLGTAVLKAFFASLGDARHLCLENGS LLWKKMPSVFAFLRLLGTPVTWAYVVHCIVAAVAVIAVWQVWRHCQNWNLRGAALMTATFLVSPYAYDYDLAWLAFPIAW LAVDGLRNGWLRGEREALVAAWLMPLLMSPIAGALKFQIGPLVLCSLLWITVRRANAASMMGGMATDAYADQFEPLP
Sequences:
>Translated_317_residues MALPSVVLPRCTAAGVTAVSGGILDLHVVNSGGYLLVLRRLVRGKTAMWCLAGFSGLWGNLYCGQNGFLTAAIAGIALLS LERRPVLAGVFIGLLAIKPHLAVLFPVALLAIGAWRTLITAAVTAITFMAIGTLTLGTAVLKAFFASLGDARHLCLENGS LLWKKMPSVFAFLRLLGTPVTWAYVVHCIVAAVAVIAVWQVWRHCQNWNLRGAALMTATFLVSPYAYDYDLAWLAFPIAW LAVDGLRNGWLRGEREALVAAWLMPLLMSPIAGALKFQIGPLVLCSLLWITVRRANAASMMGGMATDAYADQFEPLP >Mature_316_residues ALPSVVLPRCTAAGVTAVSGGILDLHVVNSGGYLLVLRRLVRGKTAMWCLAGFSGLWGNLYCGQNGFLTAAIAGIALLSL ERRPVLAGVFIGLLAIKPHLAVLFPVALLAIGAWRTLITAAVTAITFMAIGTLTLGTAVLKAFFASLGDARHLCLENGSL LWKKMPSVFAFLRLLGTPVTWAYVVHCIVAAVAVIAVWQVWRHCQNWNLRGAALMTATFLVSPYAYDYDLAWLAFPIAWL AVDGLRNGWLRGEREALVAAWLMPLLMSPIAGALKFQIGPLVLCSLLWITVRRANAASMMGGMATDAYADQFEPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34048; Mature: 33917
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPSVVLPRCTAAGVTAVSGGILDLHVVNSGGYLLVLRRLVRGKTAMWCLAGFSGLWGN CCCCCCHHCCCCCCCHHHHCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC LYCGQNGFLTAAIAGIALLSLERRPVLAGVFIGLLAIKPHLAVLFPVALLAIGAWRTLIT EEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVTAITFMAIGTLTLGTAVLKAFFASLGDARHLCLENGSLLWKKMPSVFAFLRLLGTPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH TWAYVVHCIVAAVAVIAVWQVWRHCQNWNLRGAALMTATFLVSPYAYDYDLAWLAFPIAW HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LAVDGLRNGWLRGEREALVAAWLMPLLMSPIAGALKFQIGPLVLCSLLWITVRRANAASM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH MGGMATDAYADQFEPLP HCCCHHHHHHHCCCCCC >Mature Secondary Structure ALPSVVLPRCTAAGVTAVSGGILDLHVVNSGGYLLVLRRLVRGKTAMWCLAGFSGLWGN CCCCCHHCCCCCCCHHHHCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC LYCGQNGFLTAAIAGIALLSLERRPVLAGVFIGLLAIKPHLAVLFPVALLAIGAWRTLIT EEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVTAITFMAIGTLTLGTAVLKAFFASLGDARHLCLENGSLLWKKMPSVFAFLRLLGTPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH TWAYVVHCIVAAVAVIAVWQVWRHCQNWNLRGAALMTATFLVSPYAYDYDLAWLAFPIAW HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LAVDGLRNGWLRGEREALVAAWLMPLLMSPIAGALKFQIGPLVLCSLLWITVRRANAASM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH MGGMATDAYADQFEPLP HCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA