| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673280
Identifier: 21673280
GI number: 21673280
Start: 462471
End: 464975
Strand: Direct
Name: 21673280
Synonym: CT0442
Alternate gene names: NA
Gene position: 462471-464975 (Clockwise)
Preceding gene: 21673279
Following gene: 21673282
Centisome position: 21.46
GC content: 55.25
Gene sequence:
>2505_bases ATGGCAGGAAATGCTATGAAAACACAAGCGCACTGGCTGAACTGGAAGCACCTCAAAGTTTATTCCAGCCTGCTTCTTGC TCTATTCCTTATCTACGGTATAGGGGGTGTTTATTTTTCAAAAAATATGGTTGACGCAGGAGGGCACCCTCTCGGTTTAG ATTTTATTGCATTTTGGGGTGCATCGTATCTTGCTCTGGCAGGGCATGCTCAAGACGCCTACAACATTCCTTTGCTTTTC AAGGCTCAGCAAATTGGTGTGCCGGCTGCAAAAGTTTCTTACCCATGGTTTTATCCGCCTTCGTACTTCCTTGTTATTTT GCCGTTGGCGTTACTGCCGTACCTGGCAGCATACGGGACTTTCATGTTGTCAACGCTGGGCGGCTATCTTTTGGTGTTTC GCCGCATCATTCGCGGCAAGACGGCGATGTGGTGCCTGGCCGGTTTCTCCGGATTGTGGATGAACTTTTTTGATGGCCAG AACGGATTTCTGACCGCCGCACTTGCCGGCGCGGCATTGCTCAATTTTGAGCGACGTCCTGTTCTGGCGGGAGTGTTCAT CGGCCTGCTTGCCATCAAACCGCATCTTGCGATGCTCTTTCCGGTGGCGCTACTCGCCATTGGGGCGTGGCGGACGTTGA TAACCGCTGCCGTGACGGCGATTACCTTTATGGCTGCTGGAACGGCAATTCTGGGAACCGCTGTGCTGAAAGCGTTTCTT GCGAGTCTGGGCGATGCGCGTCTGTTTATGGAAAACACCCATCTTCTCTGGAATAAAGTCCCCTCGGTGTTTGCGTTTCT GCGCCTGCTAGGAACGTCCGCCACATGGGCATATGCTGTCCAGTTTGCCGTCGCTGTGGTGGCCGTGATCATCGTCTGGC GCGTCTGGCGCCATTGCCGGAACCGGAACCTTCGTAACGCAGTTCTGATGACGGCAACGTTTCTGGTCAGCCCATACGCA TTTTATTACGATCTGGCATGGCTGGCCTTTCCCATCGCCTGGCTGGCATTGGATGGTCTGCGCAACGGCTGGCTGCGCGG AGAGCGCGAAGTGCTTGTGGCGGCGTGGTTGCTGCCGCTGATGATGGTTCTGATAGCTGCAATGCTGAAAGTGCAGGTAG GTCCACTGGTACTTGGCAGTTTGTTGTGGATGACGTATCGTCGTGCAACGACAGCATCGATGACAGGCGCTCCGGCCAGT GCCGCGCCTGCGAAGATCAGTTCGAGACTGTACAGTAAGCGATGTTATTCTCTGGCGAACACTTCGACAATGGCAAAAAA ATCCGAACACGCAGCAGAGAGAAAGACCATGAACGCAGACGCGCACTGGCTGAACCGGGAGCGCCTCATATTTTATTCCC GCATCTTTCTGGCGCTCTTCTTCGGAATTGGCGTAGGGTTGGTGGTAACGTCAAAACATATGGTTACCGGCGACTTTGTC CTGGCCTGGGCTGCATCGCATCTTGCCTTGACAGGACATGCACTGGATGCCTACAGCATACCTTCACTCATCAAGGCTCA GCAAATTGCAGAACCCGGCCCGCAGGATGTTTATGGATGGTTCTATCCGCCCTCATACTACCTTCTTATTCTGCCCCTGG CGTTACTGCCGTACGCGGCAGCATACTGGAGCTTCATGTTGTCAACGCTGGGCGGCTATCTTTTGGTGTTTCGCCGCATC ATTCGCGATAAGACGGCGATGTGGTGCCTGGCCGGTTTCTCCGGATTGTGGATGAACTTTTTTGATGGCCAGAACGGATT TCTGACCGCCGCACTTGCCGGCGCGGCATTGCTCAATCTTGAGCGACGTCCTGTTCTGGCGGGAGTGTTCATCGGCCTGC TTGCCATCAAACCGCATCTTGCGATGCTCTTTCCGGTGGCGCTACTCGCCATTGGGGCGTGGCGGACGTTGATAACCGCT GCCGTGACGGCGATTACCTTTATGGCGGTTGGAACGGCAATTCTGGGAACCGCTGTGCTGAAAGCGTTTCTTGCGAGTCT GGGCGATGCCCGGCATTTATGTCTTGAAAACGGATCTCTTCTCTGGAGTAAAATGCCCTCAGTATTTGCGTTCATGCGTC TGCTCGGCACGCCCGTCACCTGGGCGTATGTCGCTCATTTCATCGTTGCTGTGGTGGCCGTGATCGCCGTCTGGCGCGTC TGGCGCAATTGTCAGAACCGGAACCTTCGTGGAGCATCCCTGATGACGGCAACGTTTCTGGTTAGCCCGTATGTATTGTT TTACGACCTGGCGTGGCTGGCCTTTCCGATCGCCTGGCTGGCATTGGACGGGTTGCGCTACGGCTGGCAGCGTGGCGAGC GCGCAGTGCTCGCGGCGGCGTGGTTGCTGCCGCTGCTGATGATGGTACAGATCATTGCGCATCTGAACGTGCAGGTGGGG CCGCTGGTGCTTTGCAGTCTGTTGTGGATGACGTATCGTCGTGCAACGACAGCATCGATGACAGGCGCTCCGGCCAGTGC CGCGCCTGCGAAGATCAGTTTGTGA
Upstream 100 bases:
>100_bases ACGCTTATGCTGATCAGTTTGAGCCGCTACCGTAAAGAGAACTTGCTATGCCTGGCTTTGTAAGGCACTCCAACGATGCT GGAAAATATCCAAACACACA
Downstream 100 bases:
>100_bases GTGTGCCGTAAGTTGTGTCGCCAAAGTGCCGTGAACGCTAACCAAAAACTGTTGGCAGGCATACCAGCATCATAAATCAC AAAATGCCGGTAATCACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 834; Mature: 833
Protein sequence:
>834_residues MAGNAMKTQAHWLNWKHLKVYSSLLLALFLIYGIGGVYFSKNMVDAGGHPLGLDFIAFWGASYLALAGHAQDAYNIPLLF KAQQIGVPAAKVSYPWFYPPSYFLVILPLALLPYLAAYGTFMLSTLGGYLLVFRRIIRGKTAMWCLAGFSGLWMNFFDGQ NGFLTAALAGAALLNFERRPVLAGVFIGLLAIKPHLAMLFPVALLAIGAWRTLITAAVTAITFMAAGTAILGTAVLKAFL ASLGDARLFMENTHLLWNKVPSVFAFLRLLGTSATWAYAVQFAVAVVAVIIVWRVWRHCRNRNLRNAVLMTATFLVSPYA FYYDLAWLAFPIAWLALDGLRNGWLRGEREVLVAAWLLPLMMVLIAAMLKVQVGPLVLGSLLWMTYRRATTASMTGAPAS AAPAKISSRLYSKRCYSLANTSTMAKKSEHAAERKTMNADAHWLNRERLIFYSRIFLALFFGIGVGLVVTSKHMVTGDFV LAWAASHLALTGHALDAYSIPSLIKAQQIAEPGPQDVYGWFYPPSYYLLILPLALLPYAAAYWSFMLSTLGGYLLVFRRI IRDKTAMWCLAGFSGLWMNFFDGQNGFLTAALAGAALLNLERRPVLAGVFIGLLAIKPHLAMLFPVALLAIGAWRTLITA AVTAITFMAVGTAILGTAVLKAFLASLGDARHLCLENGSLLWSKMPSVFAFMRLLGTPVTWAYVAHFIVAVVAVIAVWRV WRNCQNRNLRGASLMTATFLVSPYVLFYDLAWLAFPIAWLALDGLRYGWQRGERAVLAAAWLLPLLMMVQIIAHLNVQVG PLVLCSLLWMTYRRATTASMTGAPASAAPAKISL
Sequences:
>Translated_834_residues MAGNAMKTQAHWLNWKHLKVYSSLLLALFLIYGIGGVYFSKNMVDAGGHPLGLDFIAFWGASYLALAGHAQDAYNIPLLF KAQQIGVPAAKVSYPWFYPPSYFLVILPLALLPYLAAYGTFMLSTLGGYLLVFRRIIRGKTAMWCLAGFSGLWMNFFDGQ NGFLTAALAGAALLNFERRPVLAGVFIGLLAIKPHLAMLFPVALLAIGAWRTLITAAVTAITFMAAGTAILGTAVLKAFL ASLGDARLFMENTHLLWNKVPSVFAFLRLLGTSATWAYAVQFAVAVVAVIIVWRVWRHCRNRNLRNAVLMTATFLVSPYA FYYDLAWLAFPIAWLALDGLRNGWLRGEREVLVAAWLLPLMMVLIAAMLKVQVGPLVLGSLLWMTYRRATTASMTGAPAS AAPAKISSRLYSKRCYSLANTSTMAKKSEHAAERKTMNADAHWLNRERLIFYSRIFLALFFGIGVGLVVTSKHMVTGDFV LAWAASHLALTGHALDAYSIPSLIKAQQIAEPGPQDVYGWFYPPSYYLLILPLALLPYAAAYWSFMLSTLGGYLLVFRRI IRDKTAMWCLAGFSGLWMNFFDGQNGFLTAALAGAALLNLERRPVLAGVFIGLLAIKPHLAMLFPVALLAIGAWRTLITA AVTAITFMAVGTAILGTAVLKAFLASLGDARHLCLENGSLLWSKMPSVFAFMRLLGTPVTWAYVAHFIVAVVAVIAVWRV WRNCQNRNLRGASLMTATFLVSPYVLFYDLAWLAFPIAWLALDGLRYGWQRGERAVLAAAWLLPLLMMVQIIAHLNVQVG PLVLCSLLWMTYRRATTASMTGAPASAAPAKISL >Mature_833_residues AGNAMKTQAHWLNWKHLKVYSSLLLALFLIYGIGGVYFSKNMVDAGGHPLGLDFIAFWGASYLALAGHAQDAYNIPLLFK AQQIGVPAAKVSYPWFYPPSYFLVILPLALLPYLAAYGTFMLSTLGGYLLVFRRIIRGKTAMWCLAGFSGLWMNFFDGQN GFLTAALAGAALLNFERRPVLAGVFIGLLAIKPHLAMLFPVALLAIGAWRTLITAAVTAITFMAAGTAILGTAVLKAFLA SLGDARLFMENTHLLWNKVPSVFAFLRLLGTSATWAYAVQFAVAVVAVIIVWRVWRHCRNRNLRNAVLMTATFLVSPYAF YYDLAWLAFPIAWLALDGLRNGWLRGEREVLVAAWLLPLMMVLIAAMLKVQVGPLVLGSLLWMTYRRATTASMTGAPASA APAKISSRLYSKRCYSLANTSTMAKKSEHAAERKTMNADAHWLNRERLIFYSRIFLALFFGIGVGLVVTSKHMVTGDFVL AWAASHLALTGHALDAYSIPSLIKAQQIAEPGPQDVYGWFYPPSYYLLILPLALLPYAAAYWSFMLSTLGGYLLVFRRII RDKTAMWCLAGFSGLWMNFFDGQNGFLTAALAGAALLNLERRPVLAGVFIGLLAIKPHLAMLFPVALLAIGAWRTLITAA VTAITFMAVGTAILGTAVLKAFLASLGDARHLCLENGSLLWSKMPSVFAFMRLLGTPVTWAYVAHFIVAVVAVIAVWRVW RNCQNRNLRGASLMTATFLVSPYVLFYDLAWLAFPIAWLALDGLRYGWQRGERAVLAAAWLLPLLMMVQIIAHLNVQVGP LVLCSLLWMTYRRATTASMTGAPASAAPAKISL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91559; Mature: 91428
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNAMKTQAHWLNWKHLKVYSSLLLALFLIYGIGGVYFSKNMVDAGGHPLGLDFIAFWG CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHH ASYLALAGHAQDAYNIPLLFKAQQIGVPAAKVSYPWFYPPSYFLVILPLALLPYLAAYGT HHHHHHHCCCCCCCCCCEEEEHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FMLSTLGGYLLVFRRIIRGKTAMWCLAGFSGLWMNFFDGQNGFLTAALAGAALLNFERRP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCH VLAGVFIGLLAIKPHLAMLFPVALLAIGAWRTLITAAVTAITFMAAGTAILGTAVLKAFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASLGDARLFMENTHLLWNKVPSVFAFLRLLGTSATWAYAVQFAVAVVAVIIVWRVWRHCR HHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NRNLRNAVLMTATFLVSPYAFYYDLAWLAFPIAWLALDGLRNGWLRGEREVLVAAWLLPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH MMVLIAAMLKVQVGPLVLGSLLWMTYRRATTASMTGAPASAAPAKISSRLYSKRCYSLAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TSTMAKKSEHAAERKTMNADAHWLNRERLIFYSRIFLALFFGIGVGLVVTSKHMVTGDFV HHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHCCHHHH LAWAASHLALTGHALDAYSIPSLIKAQQIAEPGPQDVYGWFYPPSYYLLILPLALLPYAA HHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHH AYWSFMLSTLGGYLLVFRRIIRDKTAMWCLAGFSGLWMNFFDGQNGFLTAALAGAALLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC ERRPVLAGVFIGLLAIKPHLAMLFPVALLAIGAWRTLITAAVTAITFMAVGTAILGTAVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAFLASLGDARHLCLENGSLLWSKMPSVFAFMRLLGTPVTWAYVAHFIVAVVAVIAVWRV HHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH WRNCQNRNLRGASLMTATFLVSPYVLFYDLAWLAFPIAWLALDGLRYGWQRGERAVLAAA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH WLLPLLMMVQIIAHLNVQVGPLVLCSLLWMTYRRATTASMTGAPASAAPAKISL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGNAMKTQAHWLNWKHLKVYSSLLLALFLIYGIGGVYFSKNMVDAGGHPLGLDFIAFWG CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHH ASYLALAGHAQDAYNIPLLFKAQQIGVPAAKVSYPWFYPPSYFLVILPLALLPYLAAYGT HHHHHHHCCCCCCCCCCEEEEHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FMLSTLGGYLLVFRRIIRGKTAMWCLAGFSGLWMNFFDGQNGFLTAALAGAALLNFERRP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCH VLAGVFIGLLAIKPHLAMLFPVALLAIGAWRTLITAAVTAITFMAAGTAILGTAVLKAFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASLGDARLFMENTHLLWNKVPSVFAFLRLLGTSATWAYAVQFAVAVVAVIIVWRVWRHCR HHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NRNLRNAVLMTATFLVSPYAFYYDLAWLAFPIAWLALDGLRNGWLRGEREVLVAAWLLPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH MMVLIAAMLKVQVGPLVLGSLLWMTYRRATTASMTGAPASAAPAKISSRLYSKRCYSLAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TSTMAKKSEHAAERKTMNADAHWLNRERLIFYSRIFLALFFGIGVGLVVTSKHMVTGDFV HHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHCCHHHH LAWAASHLALTGHALDAYSIPSLIKAQQIAEPGPQDVYGWFYPPSYYLLILPLALLPYAA HHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHH AYWSFMLSTLGGYLLVFRRIIRDKTAMWCLAGFSGLWMNFFDGQNGFLTAALAGAALLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC ERRPVLAGVFIGLLAIKPHLAMLFPVALLAIGAWRTLITAAVTAITFMAVGTAILGTAVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAFLASLGDARHLCLENGSLLWSKMPSVFAFMRLLGTPVTWAYVAHFIVAVVAVIAVWRV HHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH WRNCQNRNLRGASLMTATFLVSPYVLFYDLAWLAFPIAWLALDGLRYGWQRGERAVLAAA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH WLLPLLMMVQIIAHLNVQVGPLVLCSLLWMTYRRATTASMTGAPASAAPAKISL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA