| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673278
Identifier: 21673278
GI number: 21673278
Start: 459889
End: 461109
Strand: Direct
Name: 21673278
Synonym: CT0440
Alternate gene names: NA
Gene position: 459889-461109 (Clockwise)
Preceding gene: 21673277
Following gene: 21673279
Centisome position: 21.34
GC content: 53.73
Gene sequence:
>1221_bases ATGAAATCGGACGCGCATTGGCTGAACTGGGAGCGTCTTACCATATATCCCCGCATCTTTCTGGCTGGATTTTTTGTGTT TGGCTTAGGGTGTGTTTTTATTGCAAAAAAAAAGTTTGGCCTGAATGGGATACCGTTTGGTGCTGATTTTATAACATTCT GGGGGGCCTCGCATCTTGCCTTGACAGGGCATGCTCAGGACGCTTACAACAATTCCCTGCTGTTAAAGGCTGAACAACTC GTAATACCGGTATTCAGGTTCACTTATATATGGGCCTACCCTCCGTCGTTCTATTTTGTTGTGCTTCCTCTGGCGTTACT GCCTTACGTGGCAGCATACTGGACCTTCATGCTCTCAACGCTGTGGGGTTATCTTCTGGTGTTTCGCCGCATCGTTCGTG GCAACATTGCGATGTGGTGTCTGGCAGCGTTCTCCGGATTGTGGGTAAACCTCATTTGCGGCCAGAATGGATTCCTGACC GCAGCACTTGCCGGTGCGGCTCTCCTTGCCGTTGAGCGAAGGCCGGTTGTGGCCGGGCTGTTTATTGGCCTGCTTGCCAT CAAACCGCATCTTGCGATGCTCTTTCCGGTGGCGTTACTCGCTATTGGGGCGTGGCGGACGTTGATAACCGCCGCCGTGA CGGCAATCACGTTTATGGCCATTGGCACGGCGACCCTTGGTACTGCGGTGCTGAAGGGATTTTTCGCAAATCTGGGCTAT GCTCGTCTGTTTCTGGAAAACGGAGGCCTTCCATGGAAGAAAATGCCCTCGATGTTTGTTTTTTTGCGTTTGCTCGGAAC GCCCGTCACATGGGCGTATGCTATTCATTTCTTCGTTGCCGCGGGGGCGGTGATCGCTGTCTGGCGCGTCTGGCGTCATT GCCGGAACTGGGAGCTTCGAAACGCAGCCCTGATGACGGCAACCTTTCTGGTCAGTCCATACGTGTATGATTATGACCTG GCCTGGCTGGCTTTTCCGATTGCATGGCTGGCAGTGGACGGGTTGCGCAACGGCTGGCTGCGTGGTGAACGCGAAGTGCT GGTGGCGGCCTGGTTGTTTCCGGTCCTCATGATACCAATAGCTGAAGCGGTGAAAGTGCAGATAGGGCCGATAGTGCTTT GCAGCCTGCTGTGGATGACGTATCGTCGTGCAACGAAAACATCGATGACGGGGGCTACGGCAATCGATGACCATGCAGCG CAGTTCGAGACTGTACCATAG
Upstream 100 bases:
>100_bases GCTCGGAACGGTACCGTAAGCGGAACTTTTTTCGCTTGATTCTGGAAAACACTTCGACGATGCCCAAAAAATCGCGGAAT ACGAAAGAGATAAAGAGGTC
Downstream 100 bases:
>100_bases GAACTCGCCTTGCCTGATTCCGCAAAACACTTCAACGATGCCGAAAAAATTCGAATATGTAACAGATAGAGAGACCACGA AGGCCGAAGCGCATTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MKSDAHWLNWERLTIYPRIFLAGFFVFGLGCVFIAKKKFGLNGIPFGADFITFWGASHLALTGHAQDAYNNSLLLKAEQL VIPVFRFTYIWAYPPSFYFVVLPLALLPYVAAYWTFMLSTLWGYLLVFRRIVRGNIAMWCLAAFSGLWVNLICGQNGFLT AALAGAALLAVERRPVVAGLFIGLLAIKPHLAMLFPVALLAIGAWRTLITAAVTAITFMAIGTATLGTAVLKGFFANLGY ARLFLENGGLPWKKMPSMFVFLRLLGTPVTWAYAIHFFVAAGAVIAVWRVWRHCRNWELRNAALMTATFLVSPYVYDYDL AWLAFPIAWLAVDGLRNGWLRGEREVLVAAWLFPVLMIPIAEAVKVQIGPIVLCSLLWMTYRRATKTSMTGATAIDDHAA QFETVP
Sequences:
>Translated_406_residues MKSDAHWLNWERLTIYPRIFLAGFFVFGLGCVFIAKKKFGLNGIPFGADFITFWGASHLALTGHAQDAYNNSLLLKAEQL VIPVFRFTYIWAYPPSFYFVVLPLALLPYVAAYWTFMLSTLWGYLLVFRRIVRGNIAMWCLAAFSGLWVNLICGQNGFLT AALAGAALLAVERRPVVAGLFIGLLAIKPHLAMLFPVALLAIGAWRTLITAAVTAITFMAIGTATLGTAVLKGFFANLGY ARLFLENGGLPWKKMPSMFVFLRLLGTPVTWAYAIHFFVAAGAVIAVWRVWRHCRNWELRNAALMTATFLVSPYVYDYDL AWLAFPIAWLAVDGLRNGWLRGEREVLVAAWLFPVLMIPIAEAVKVQIGPIVLCSLLWMTYRRATKTSMTGATAIDDHAA QFETVP >Mature_406_residues MKSDAHWLNWERLTIYPRIFLAGFFVFGLGCVFIAKKKFGLNGIPFGADFITFWGASHLALTGHAQDAYNNSLLLKAEQL VIPVFRFTYIWAYPPSFYFVVLPLALLPYVAAYWTFMLSTLWGYLLVFRRIVRGNIAMWCLAAFSGLWVNLICGQNGFLT AALAGAALLAVERRPVVAGLFIGLLAIKPHLAMLFPVALLAIGAWRTLITAAVTAITFMAIGTATLGTAVLKGFFANLGY ARLFLENGGLPWKKMPSMFVFLRLLGTPVTWAYAIHFFVAAGAVIAVWRVWRHCRNWELRNAALMTATFLVSPYVYDYDL AWLAFPIAWLAVDGLRNGWLRGEREVLVAAWLFPVLMIPIAEAVKVQIGPIVLCSLLWMTYRRATKTSMTGATAIDDHAA QFETVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45263; Mature: 45263
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSDAHWLNWERLTIYPRIFLAGFFVFGLGCVFIAKKKFGLNGIPFGADFITFWGASHLA CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEE LTGHAQDAYNNSLLLKAEQLVIPVFRFTYIWAYPPSFYFVVLPLALLPYVAAYWTFMLST EECCCHHHCCCCEEEEHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH LWGYLLVFRRIVRGNIAMWCLAAFSGLWVNLICGQNGFLTAALAGAALLAVERRPVVAGL HHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHH FIGLLAIKPHLAMLFPVALLAIGAWRTLITAAVTAITFMAIGTATLGTAVLKGFFANLGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ARLFLENGGLPWKKMPSMFVFLRLLGTPVTWAYAIHFFVAAGAVIAVWRVWRHCRNWELR HEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NAALMTATFLVSPYVYDYDLAWLAFPIAWLAVDGLRNGWLRGEREVLVAAWLFPVLMIPI HHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH AEAVKVQIGPIVLCSLLWMTYRRATKTSMTGATAIDDHAAQFETVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHCCCCC >Mature Secondary Structure MKSDAHWLNWERLTIYPRIFLAGFFVFGLGCVFIAKKKFGLNGIPFGADFITFWGASHLA CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEE LTGHAQDAYNNSLLLKAEQLVIPVFRFTYIWAYPPSFYFVVLPLALLPYVAAYWTFMLST EECCCHHHCCCCEEEEHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH LWGYLLVFRRIVRGNIAMWCLAAFSGLWVNLICGQNGFLTAALAGAALLAVERRPVVAGL HHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHH FIGLLAIKPHLAMLFPVALLAIGAWRTLITAAVTAITFMAIGTATLGTAVLKGFFANLGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ARLFLENGGLPWKKMPSMFVFLRLLGTPVTWAYAIHFFVAAGAVIAVWRVWRHCRNWELR HEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NAALMTATFLVSPYVYDYDLAWLAFPIAWLAVDGLRNGWLRGEREVLVAAWLFPVLMIPI HHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH AEAVKVQIGPIVLCSLLWMTYRRATKTSMTGATAIDDHAAQFETVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA