| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is murI
Identifier: 21673123
GI number: 21673123
Start: 295732
End: 296550
Strand: Reverse
Name: murI
Synonym: CT0284
Alternate gene names: 21673123
Gene position: 296550-295732 (Counterclockwise)
Preceding gene: 21673124
Following gene: 21673122
Centisome position: 13.76
GC content: 59.83
Gene sequence:
>819_bases ATGCCACAGCACAAGGTTTCATCTGACAGTCCTATCGGCATCTTCGATTCGGGCATCGGTGGTCTGACCGTCGTCAAGGC CGTGCAGGCCGCACTGCCCTCTGAGCGGATCATCTATTTTGGCGACACGGCTCGCGTACCGTACGGCTCGAAATCGCAGG TCACGATTCGGAAGTATGCCCGCGAGGACACCGAGCTGTTGATGAAGCACCAGCCGAAGCTCATCATCGTGGCGTGTAAC ACCGTGTCAGCGCTGGCGCTCGACGTAGTCGAGCAGACTGCCGGAGGCATTCCGGTCATCGGCGTGCTGAAAGCTGGCGC GGAACTGGCCGTGCAGAAGACGAAATCGGGCCGCATCGGCGTCATCGGCACCCAGGCCACCATCGGCTCGAACGCCTACA CCTGCGCCATCCGCGAGGAGAAAGAAACACTCGAAGTTTTTCCGAAAGCCTGTCCGCTTTTCGTACCGCTCGCCGAAGAG GGCTTCATCGATCACCCTGCCACAAGACTTGTCGCCGAAGAATACTTGGCTGCCTTCACCGGTAAAGAGATCGACACCCT CGTGCTCGGCTGCACCCACTACCCGATTCTCCGCAAGATCATCGAAAGCATCACCGGGCCGGAAATCACCATCATCGACT CCGCCGAAGCGGTTGCCAGCAAAGCCGGAGAACTCCTCGCAGCTCGCGGCCTCTTGAACCAAAGCCCCGAAAAAGCGCTG CCGCATCTCATGGTCAGCGACCTCCCGCAGAAGTTCCGCGAACTCTACCGCCTCTTCATGGGCACCGAACTCCCCGACGT CGAGCTGGTAGGGATGTAG
Upstream 100 bases:
>100_bases GCAGAAGGTCAAAGAGGCCGGCAAAATGCGCTCCGAAGGCAAAGAGTATGTTGTCAAGGATGGGGATGTGATTACTTTCC GGTTTAATGTGTAAGACGCC
Downstream 100 bases:
>100_bases CCATTGCCTTTCCCATTTTAATCGTATCTTTTCCGGCAAAATCTGAACCTTGAAGGCGACGGCCTTACCATACCGGAGAG ACCAGTGAAAATCAATCTTG
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MPQHKVSSDSPIGIFDSGIGGLTVVKAVQAALPSERIIYFGDTARVPYGSKSQVTIRKYAREDTELLMKHQPKLIIVACN TVSALALDVVEQTAGGIPVIGVLKAGAELAVQKTKSGRIGVIGTQATIGSNAYTCAIREEKETLEVFPKACPLFVPLAEE GFIDHPATRLVAEEYLAAFTGKEIDTLVLGCTHYPILRKIIESITGPEITIIDSAEAVASKAGELLAARGLLNQSPEKAL PHLMVSDLPQKFRELYRLFMGTELPDVELVGM
Sequences:
>Translated_272_residues MPQHKVSSDSPIGIFDSGIGGLTVVKAVQAALPSERIIYFGDTARVPYGSKSQVTIRKYAREDTELLMKHQPKLIIVACN TVSALALDVVEQTAGGIPVIGVLKAGAELAVQKTKSGRIGVIGTQATIGSNAYTCAIREEKETLEVFPKACPLFVPLAEE GFIDHPATRLVAEEYLAAFTGKEIDTLVLGCTHYPILRKIIESITGPEITIIDSAEAVASKAGELLAARGLLNQSPEKAL PHLMVSDLPQKFRELYRLFMGTELPDVELVGM >Mature_271_residues PQHKVSSDSPIGIFDSGIGGLTVVKAVQAALPSERIIYFGDTARVPYGSKSQVTIRKYAREDTELLMKHQPKLIIVACNT VSALALDVVEQTAGGIPVIGVLKAGAELAVQKTKSGRIGVIGTQATIGSNAYTCAIREEKETLEVFPKACPLFVPLAEEG FIDHPATRLVAEEYLAAFTGKEIDTLVLGCTHYPILRKIIESITGPEITIIDSAEAVASKAGELLAARGLLNQSPEKALP HLMVSDLPQKFRELYRLFMGTELPDVELVGM
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family
Homologues:
Organism=Escherichia coli, GI87082355, Length=225, Percent_Identity=29.3333333333333, Blast_Score=78, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURI_CHLTE (Q8KFN8)
Other databases:
- EMBL: AE006470 - RefSeq: NP_661188.1 - ProteinModelPortal: Q8KFN8 - SMR: Q8KFN8 - GeneID: 1007856 - GenomeReviews: AE006470_GR - KEGG: cte:CT0284 - NMPDR: fig|194439.1.peg.282 - TIGR: CT0284 - HOGENOM: HBG645102 - OMA: VACNTAA - ProtClustDB: PRK00865 - BioCyc: CTEP194439:CT_0284-MONOMER - BRENDA: 5.1.1.3 - HAMAP: MF_00258 - InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 - Gene3D: G3DSA:3.40.50.1860 - TIGRFAMs: TIGR00067
Pfam domain/function: PF01177 Asp_Glu_race; SSF53681 Asp/Glu_race
EC number: =5.1.1.3
Molecular weight: Translated: 29225; Mature: 29094
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00923 ASP_GLU_RACEMASE_1; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQHKVSSDSPIGIFDSGIGGLTVVKAVQAALPSERIIYFGDTARVPYGSKSQVTIRKYA CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHH REDTELLMKHQPKLIIVACNTVSALALDVVEQTAGGIPVIGVLKAGAELAVQKTKSGRIG HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEHHHHCCCHHEEEECCCCCEE VIGTQATIGSNAYTCAIREEKETLEVFPKACPLFVPLAEEGFIDHPATRLVAEEYLAAFT EEECCEEECCCEEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHC GKEIDTLVLGCTHYPILRKIIESITGPEITIIDSAEAVASKAGELLAARGLLNQSPEKAL CCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHH PHLMVSDLPQKFRELYRLFMGTELPDVELVGM HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure PQHKVSSDSPIGIFDSGIGGLTVVKAVQAALPSERIIYFGDTARVPYGSKSQVTIRKYA CCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHH REDTELLMKHQPKLIIVACNTVSALALDVVEQTAGGIPVIGVLKAGAELAVQKTKSGRIG HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEHHHHCCCHHEEEECCCCCEE VIGTQATIGSNAYTCAIREEKETLEVFPKACPLFVPLAEEGFIDHPATRLVAEEYLAAFT EEECCEEECCCEEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHC GKEIDTLVLGCTHYPILRKIIESITGPEITIIDSAEAVASKAGELLAARGLLNQSPEKAL CCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHH PHLMVSDLPQKFRELYRLFMGTELPDVELVGM HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901