Click here to switch to the map view.

The map label for this gene is dprA [H]

Identifier: 21673094

GI number: 21673094

Start: 263467

End: 264666

Strand: Reverse

Name: dprA [H]

Synonym: CT0255

Alternate gene names: 21673094

Gene position: 264666-263467 (Counterclockwise)

Preceding gene: 21673095

Following gene: 21673093

Centisome position: 12.28

GC content: 60.58

Gene sequence:

>1200_bases
TTGTTCCGGGGGGTCGCCCCTCCCCCCGAACGCTCTTCAACTCCCCTGCCCCCAACCATGACCACAACCCCTGAGCCAGG
CGCAGCGCTTTTGCTGCTCATCGTTTCGCAGCTTCCCGGCATCGGCCCCTCGAGAGCTCGCGCCCTGCTGAACCGTTTCG
GTGCGACCCCCGCACTCCTCGAAGCGGACTATGATGCCCTGCGCCAGATTCCCGGCATTGGAGAGACCACCGCCCGCGAA
ACCGCCGAGCGGCTCGCAAACCCGGCGTGGCGCGACAAAGCGCGCGAGAAGGGGGAAAATCAGCTCGCACGGGCGGAACG
GCTGGAAGCCTCGGTCATCACGATTCTCGACCCGGCTTATCCACCACTCCTGAAAGAGATTTACGATCCGCCACTTCTGC
TTTTCGCTCGCGGCAATCCCGAGGCGCTCTGCGTGCCCTCGCTCGCCGTCGTCGGCACCCGCAAGGCCACGGCATACGGC
AAGCAGGCCACCGAGTTCATCTGCCGCGAAATGGTAAACAACGGTTACGCCATCCTCAGCGGCCTGGCATACGGCATCGA
CATGATGGCGCACCGCGCAGCGGTGGAGAGTAATGGCGTGACGATCGCCGTGCTTGGATGCGGCATTGACCGCATCTACA
CCGACCCCGCCGGGCGACTCTGGCCGAGGATACTCGAACGAGGCGCGATCGTCTCGGAAGAGTGGATCGGCATCAAGCCC
GAACCGGGCAATTTTCCGCGAAGAAACCGCCTGATCGCCGGCCTGGCCCAAGGCACGCTGATCGTCGAATCGGACATCAA
GGGCGGCTCGATGATCACGGCGTCCTATGCCCTCGAACAGAATCGCGAAGTATTTGCTATACCGGGAAGTATTTTTTCAG
GCACCTCACGCGGCACCAACTACCTCATCCAGCAAAACCATGCCAAGCCGGTATTTTCCGCTGAAGACATTCTCGCCGAA
CTCAACCCAGCGCAACATCCTGCGCTGAAAACACATCCCGAAGCTTCCGAACCGTTCGACCTGAACATCGAGGAGTCGTG
CATCGTCGAAGCGCTTCAGTCAGGCGCAATGCATATCGACCTGATCGCTGAAAAAACCGGTCTGAAGATAGACGCCCTTC
TGGTGCATCTGTTCGAGCTTGAGCTAAAACGGATCATAGAGCAGGAGCCCGGGCAGATTTTCAGGAAACGTACCCCCTGA

Upstream 100 bases:

>100_bases
CCGAAGCAGCGCTGGCAGCGCTCGACGCCCTTCCGTTCGAGGAGGGACGCGGCTATCTGAGAGGCTTTGCCAACATTCTC
ATGAAGCGCGATTTCTGAGC

Downstream 100 bases:

>100_bases
AACGCTCAAAAAACCAAACGGTAACGACAACGCAGAGAATGTTTCTCTCATCCTGTTTTTCTCGGCTGCAATAGTATTTT
AAAACCGGAAATGTTATTTT

Product: DprA/SMF protein, putative DNA processing factor

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MFRGVAPPPERSSTPLPPTMTTTPEPGAALLLLIVSQLPGIGPSRARALLNRFGATPALLEADYDALRQIPGIGETTARE
TAERLANPAWRDKAREKGENQLARAERLEASVITILDPAYPPLLKEIYDPPLLLFARGNPEALCVPSLAVVGTRKATAYG
KQATEFICREMVNNGYAILSGLAYGIDMMAHRAAVESNGVTIAVLGCGIDRIYTDPAGRLWPRILERGAIVSEEWIGIKP
EPGNFPRRNRLIAGLAQGTLIVESDIKGGSMITASYALEQNREVFAIPGSIFSGTSRGTNYLIQQNHAKPVFSAEDILAE
LNPAQHPALKTHPEASEPFDLNIEESCIVEALQSGAMHIDLIAEKTGLKIDALLVHLFELELKRIIEQEPGQIFRKRTP

Sequences:

>Translated_399_residues
MFRGVAPPPERSSTPLPPTMTTTPEPGAALLLLIVSQLPGIGPSRARALLNRFGATPALLEADYDALRQIPGIGETTARE
TAERLANPAWRDKAREKGENQLARAERLEASVITILDPAYPPLLKEIYDPPLLLFARGNPEALCVPSLAVVGTRKATAYG
KQATEFICREMVNNGYAILSGLAYGIDMMAHRAAVESNGVTIAVLGCGIDRIYTDPAGRLWPRILERGAIVSEEWIGIKP
EPGNFPRRNRLIAGLAQGTLIVESDIKGGSMITASYALEQNREVFAIPGSIFSGTSRGTNYLIQQNHAKPVFSAEDILAE
LNPAQHPALKTHPEASEPFDLNIEESCIVEALQSGAMHIDLIAEKTGLKIDALLVHLFELELKRIIEQEPGQIFRKRTP
>Mature_399_residues
MFRGVAPPPERSSTPLPPTMTTTPEPGAALLLLIVSQLPGIGPSRARALLNRFGATPALLEADYDALRQIPGIGETTARE
TAERLANPAWRDKAREKGENQLARAERLEASVITILDPAYPPLLKEIYDPPLLLFARGNPEALCVPSLAVVGTRKATAYG
KQATEFICREMVNNGYAILSGLAYGIDMMAHRAAVESNGVTIAVLGCGIDRIYTDPAGRLWPRILERGAIVSEEWIGIKP
EPGNFPRRNRLIAGLAQGTLIVESDIKGGSMITASYALEQNREVFAIPGSIFSGTSRGTNYLIQQNHAKPVFSAEDILAE
LNPAQHPALKTHPEASEPFDLNIEESCIVEALQSGAMHIDLIAEKTGLKIDALLVHLFELELKRIIEQEPGQIFRKRTP

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=308, Percent_Identity=38.6363636363636, Blast_Score=176, Evalue=4e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 43371; Mature: 43371

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRGVAPPPERSSTPLPPTMTTTPEPGAALLLLIVSQLPGIGPSRARALLNRFGATPALL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHH
EADYDALRQIPGIGETTARETAERLANPAWRDKAREKGENQLARAERLEASVITILDPAY
HCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCC
PPLLKEIYDPPLLLFARGNPEALCVPSLAVVGTRKATAYGKQATEFICREMVNNGYAILS
CHHHHHHCCCCEEEEECCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
GLAYGIDMMAHRAAVESNGVTIAVLGCGIDRIYTDPAGRLWPRILERGAIVSEEWIGIKP
HHHHHHHHHHHHHHHCCCCCEEEEEECCCHHEEECCCHHHHHHHHHCCCEECCCCCCCCC
EPGNFPRRNRLIAGLAQGTLIVESDIKGGSMITASYALEQNREVFAIPGSIFSGTSRGTN
CCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEEEEHHCCCCEEEEECCHHHCCCCCCCC
YLIQQNHAKPVFSAEDILAELNPAQHPALKTHPEASEPFDLNIEESCIVEALQSGAMHID
EEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
LIAEKTGLKIDALLVHLFELELKRIIEQEPGQIFRKRTP
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MFRGVAPPPERSSTPLPPTMTTTPEPGAALLLLIVSQLPGIGPSRARALLNRFGATPALL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHH
EADYDALRQIPGIGETTARETAERLANPAWRDKAREKGENQLARAERLEASVITILDPAY
HCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCC
PPLLKEIYDPPLLLFARGNPEALCVPSLAVVGTRKATAYGKQATEFICREMVNNGYAILS
CHHHHHHCCCCEEEEECCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
GLAYGIDMMAHRAAVESNGVTIAVLGCGIDRIYTDPAGRLWPRILERGAIVSEEWIGIKP
HHHHHHHHHHHHHHHCCCCCEEEEEECCCHHEEECCCHHHHHHHHHCCCEECCCCCCCCC
EPGNFPRRNRLIAGLAQGTLIVESDIKGGSMITASYALEQNREVFAIPGSIFSGTSRGTN
CCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEEEEHHCCCCEEEEECCHHHCCCCCCCC
YLIQQNHAKPVFSAEDILAELNPAQHPALKTHPEASEPFDLNIEESCIVEALQSGAMHID
EEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
LIAEKTGLKIDALLVHLFELELKRIIEQEPGQIFRKRTP
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]