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The map label for this gene is ompH

Identifier: 21673093

GI number: 21673093

Start: 262764

End: 263315

Strand: Reverse

Name: ompH

Synonym: CT0254

Alternate gene names: NA

Gene position: 263315-262764 (Counterclockwise)

Preceding gene: 21673094

Following gene: 21673092

Centisome position: 12.22

GC content: 49.64

Gene sequence:

>552_bases
ATGAAAAACCTAAACACACCGATAATGTCAGATTTCAAAGGAATCAAAAAAGCGGTATCAGGATTTCTGTTCATGTCGCT
CACGCTCGGTATGAGCTTCTCGGCTCCACAGGCTTTTGCTGCCGATAATGCCCAGAAAATAGGCGTGGTCGATTATGGCA
AGATTTTCCAGATGATGCCGGAAACCAAAGCCGCCGACCAGACCCTCCAGGCGATGAAAAACCAGAGCAACGCAGAGCTT
GCCAAACAGCAGAGCGCGCTCCAGAGCGCCATCCAAGCTTATCAGAAAGAAAGGAAACCAAACGCAGTGAAAGAGAAAGA
GCTTCGCGCTCAAGAGGAGAACCTGCAGAAAAGCGCTTTGGAAAAACAGAGGCTGCTCGCTCAGAAAGAGCAGGCGCTTA
TCATTCCTATCCGTCAGAAAATCGACGTCGCCGTTGCCACGGTCGCCAAAAAAGACGGGTACAGCATGATTTTCGACAAG
AACGCCCGTGTGTACGGCGATGAGCAGTCCGATATCACCTACAAGGTGCTCGACAAGTTGAACATCAAGTAA

Upstream 100 bases:

>100_bases
CCTGTTTTTCTCGGCTGCAATAGTATTTTAAAACCGGAAATGTTATTTTTTGGGGTATCGATTCTCGATGACAATAACAA
AGAACCGTACACGCTGTATC

Downstream 100 bases:

>100_bases
CATTCGCCTGGAAGCCCTTTGAATTTTCGCCGGACAACTTTTTTTTCTCTGGCAATAGTGTTCGGTGCCGCTGGCTGTAG
TGCTCCCAAAAAGGAGGCTC

Product: outer membrane protein OmpH

Products: NA

Alternate protein names: Outer Membrane Protein OmpH

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKNLNTPIMSDFKGIKKAVSGFLFMSLTLGMSFSAPQAFAADNAQKIGVVDYGKIFQMMPETKAADQTLQAMKNQSNAEL
AKQQSALQSAIQAYQKERKPNAVKEKELRAQEENLQKSALEKQRLLAQKEQALIIPIRQKIDVAVATVAKKDGYSMIFDK
NARVYGDEQSDITYKVLDKLNIK

Sequences:

>Translated_183_residues
MKNLNTPIMSDFKGIKKAVSGFLFMSLTLGMSFSAPQAFAADNAQKIGVVDYGKIFQMMPETKAADQTLQAMKNQSNAEL
AKQQSALQSAIQAYQKERKPNAVKEKELRAQEENLQKSALEKQRLLAQKEQALIIPIRQKIDVAVATVAKKDGYSMIFDK
NARVYGDEQSDITYKVLDKLNIK
>Mature_183_residues
MKNLNTPIMSDFKGIKKAVSGFLFMSLTLGMSFSAPQAFAADNAQKIGVVDYGKIFQMMPETKAADQTLQAMKNQSNAEL
AKQQSALQSAIQAYQKERKPNAVKEKELRAQEENLQKSALEKQRLLAQKEQALIIPIRQKIDVAVATVAKKDGYSMIFDK
NARVYGDEQSDITYKVLDKLNIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20450; Mature: 20450

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLNTPIMSDFKGIKKAVSGFLFMSLTLGMSFSAPQAFAADNAQKIGVVDYGKIFQMMP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHCC
ETKAADQTLQAMKNQSNAELAKQQSALQSAIQAYQKERKPNAVKEKELRAQEENLQKSAL
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
EKQRLLAQKEQALIIPIRQKIDVAVATVAKKDGYSMIFDKNARVYGDEQSDITYKVLDKL
HHHHHHHHHCCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCHHHHHHHHH
NIK
CCC
>Mature Secondary Structure
MKNLNTPIMSDFKGIKKAVSGFLFMSLTLGMSFSAPQAFAADNAQKIGVVDYGKIFQMMP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHCC
ETKAADQTLQAMKNQSNAELAKQQSALQSAIQAYQKERKPNAVKEKELRAQEENLQKSAL
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
EKQRLLAQKEQALIIPIRQKIDVAVATVAKKDGYSMIFDKNARVYGDEQSDITYKVLDKL
HHHHHHHHHCCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCHHHHHHHHH
NIK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA