Click here to switch to the map view.

The map label for this gene is yajC [C]

Identifier: 21672906

GI number: 21672906

Start: 65703

End: 66056

Strand: Direct

Name: yajC [C]

Synonym: CT0065

Alternate gene names: 21672906

Gene position: 65703-66056 (Clockwise)

Preceding gene: 21672905

Following gene: 21672907

Centisome position: 3.05

GC content: 55.65

Gene sequence:

>354_bases
ATGTCTGACACCATCCTTGCCCTGATGCTCTTCGCCCCGCCAGCCGGAGGCGCGACGCCGAATCCGTTCGTCCAGCTCGT
ACCGCTCGTCCTGATCTTTGTCGTCTTTTACTTCTTCATGATCCGCCCGCAGCAGAAAAAACAGAAAGAGCGCGAATCGC
TGCTCAACGACATCAAGCGCGGCGACCGGGTTGTTACCATCGGCGGCATTCATGGGACCGTCGCCGGGATCGAAACCGAG
AAAAAAACGGTTCTTGTGCAGGTTGCCGACAACGTCAAGATCAAGTTCGAACGTTCGGCGATTGCCAACATAGAAAAACA
GGAAACCGGCGACAAGCTCGCCTCGAAGGAGTAA

Upstream 100 bases:

>100_bases
TGGGAAATAAATTATCTTCGGATTCGAAAAAAAAGCGCCCTATCCGGCCCGAATGTTGCCGGAGAGCCCAGCTCCGAATA
CCAACCGCAAGCTACTGACC

Downstream 100 bases:

>100_bases
GAAGCATCGATGCAGGAAATACCCGCAATTCTGGTTCTTGAAAACGGCTCGGTCTATCGCGGCACCGCCTTTGGCCATGC
TGGTGAAGCGACAGGCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSDTILALMLFAPPAGGATPNPFVQLVPLVLIFVVFYFFMIRPQQKKQKERESLLNDIKRGDRVVTIGGIHGTVAGIETE
KKTVLVQVADNVKIKFERSAIANIEKQETGDKLASKE

Sequences:

>Translated_117_residues
MSDTILALMLFAPPAGGATPNPFVQLVPLVLIFVVFYFFMIRPQQKKQKERESLLNDIKRGDRVVTIGGIHGTVAGIETE
KKTVLVQVADNVKIKFERSAIANIEKQETGDKLASKE
>Mature_116_residues
SDTILALMLFAPPAGGATPNPFVQLVPLVLIFVVFYFFMIRPQQKKQKERESLLNDIKRGDRVVTIGGIHGTVAGIETEK
KTVLVQVADNVKIKFERSAIANIEKQETGDKLASKE

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12954; Mature: 12823

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTILALMLFAPPAGGATPNPFVQLVPLVLIFVVFYFFMIRPQQKKQKERESLLNDIKR
CCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GDRVVTIGGIHGTVAGIETEKKTVLVQVADNVKIKFERSAIANIEKQETGDKLASKE
CCEEEEEECCCEEEECCCCCCEEEEEEECCCEEEEECCHHHHCCHHHHCCCCCCCCC
>Mature Secondary Structure 
SDTILALMLFAPPAGGATPNPFVQLVPLVLIFVVFYFFMIRPQQKKQKERESLLNDIKR
CCHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GDRVVTIGGIHGTVAGIETEKKTVLVQVADNVKIKFERSAIANIEKQETGDKLASKE
CCEEEEEECCCEEEECCCCCCEEEEEEECCCEEEEECCHHHHCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]