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The map label for this gene is yidD [C]

Identifier: 21672846

GI number: 21672846

Start: 4017

End: 4268

Strand: Direct

Name: yidD [C]

Synonym: CT0005

Alternate gene names: 21672846

Gene position: 4017-4268 (Clockwise)

Preceding gene: 21672845

Following gene: 21672847

Centisome position: 0.19

GC content: 49.6

Gene sequence:

>252_bases
TTGAACATCGTGCCGATTCTCCTGATACGATTTTACCAGTCATTCATTTCTCCGCTGCTTGGCCCCTCCTGCAAGTACCA
TCCCACCTGTTCCAACTACGCTATCGAGGCGTTCCGGCAGCACAATTTTTTCTACGCCTCCTGGCTGACCGTCTGGAGGG
TGCTTCGTTGCAATCCGTTTTCAAAAGGCGGCTATGATCCGGTACCGCCAAAATCAGTGAAATCCGCAGGTAATTCAAAA
GATTCGAAGTAA

Upstream 100 bases:

>100_bases
AACAGGCTGCCGCAAACGCGGGAGGGTGACAGGATTGAGTAATACGGGCAATCAACAGCATCACGGGACGGAACACAACG
GCAAAACCCCTGGCCAGCTG

Downstream 100 bases:

>100_bases
TGGACAGAAATTCGGTGATAGGCTTTGCCCTGATTGCTGCAATCATGATCGTATGGCTACAGTTCATGAAGCCTGAGCAG
AAGCTGGGACTCGAAAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MNIVPILLIRFYQSFISPLLGPSCKYHPTCSNYAIEAFRQHNFFYASWLTVWRVLRCNPFSKGGYDPVPPKSVKSAGNSK
DSK

Sequences:

>Translated_83_residues
MNIVPILLIRFYQSFISPLLGPSCKYHPTCSNYAIEAFRQHNFFYASWLTVWRVLRCNPFSKGGYDPVPPKSVKSAGNSK
DSK
>Mature_83_residues
MNIVPILLIRFYQSFISPLLGPSCKYHPTCSNYAIEAFRQHNFFYASWLTVWRVLRCNPFSKGGYDPVPPKSVKSAGNSK
DSK

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=65, Percent_Identity=61.5384615384615, Blast_Score=89, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y005_CHLTE (Q8KGG3)

Other databases:

- EMBL:   AE006470
- RefSeq:   NP_660911.1
- GeneID:   1006132
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT0005
- NMPDR:   fig|194439.1.peg.5
- TIGR:   CT0005
- HOGENOM:   HBG634291
- OMA:   RRISKCH
- ProtClustDB:   CLSK637098
- BioCyc:   CTEP194439:CT_0005-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 9487; Mature: 9487

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVPILLIRFYQSFISPLLGPSCKYHPTCSNYAIEAFRQHNFFYASWLTVWRVLRCNPF
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
SKGGYDPVPPKSVKSAGNSKDSK
CCCCCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MNIVPILLIRFYQSFISPLLGPSCKYHPTCSNYAIEAFRQHNFFYASWLTVWRVLRCNPF
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
SKGGYDPVPPKSVKSAGNSKDSK
CCCCCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901