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The map label for this gene is 15898189

Identifier: 15898189

GI number: 15898189

Start: 1185287

End: 1186006

Strand: Reverse

Name: 15898189

Synonym: SSO1348

Alternate gene names: NA

Gene position: 1186006-1185287 (Counterclockwise)

Preceding gene: 15898190

Following gene: 15898188

Centisome position: 39.64

GC content: 41.53

Gene sequence:

>720_bases
GTGCACTTCACGTACTCCATCAAGAATAGTGAGAGGGAGAAGAGCAAAGAGTTAATTAAAGAATACAGAACACTACTACA
GAAAGCAATTGACTACCTGTGGAATTTAACGAAAATACAAGTAAGAAAAAAGAACGGTAATTACAAGATAACACTACCGA
AGAAGAAGGAAGTATACAAACCACTTAGGGAAGAGTTGGAGAAGATCAATCACCTTGCGTCACATTACGTCGATAAGGCA
ATTAATGACGCATTCTCGATCTTGAAGTCGTGGAGGAAAAGGGCCATAAAGGGGAGAGCTTCGATTGAAAAACCAAGGGT
GAAGAAGGCTTACGTTAGGATAAAGACGACTCTGAGGAAGGTTGTGGGGGAAAGCGTTAGAATAACGGTAAGACCTCATG
AGTACATCACCTTCTCGTGGAGTAAGTCATGGTTCTCAAGAAGGGTTAAGGAGTTGGAACTTGGTGAACCTATAATTAAG
GAGGAGAAGGTTTACCTACCATTTCGTTACAAGTTACCATGGGTAACACCAGTGAACTTTCTAGCTATTGACTCCAACCT
TTATACTCTAGATGCTTATGATGGTGAGAAATTCGTTACAATCTCTCTGAAGCAGTTGTACTCCCTTAAGTACTCCATGG
AGGTGAAGAGGGCTAAGGTGCAATCATTTGCATCAAAGCACACGAAGAGGGAGAGAGTTGATGAGGAAGTATTCGCATAG

Upstream 100 bases:

>100_bases
TGAACCGGAAGAGGAATACGTTAGTGCCTTCAGAAAGTCTATAGCTTTAGGCAAAGGATATACCACTAGATCATAGTCTA
AGAACTTTTCCAAAATACTA

Downstream 100 bases:

>100_bases
GGAGAGGAATCGCGTTCTGGACTTCGTTCACAAGTTTGTAAACACTTTGTTGGACTTGTACCCCATGACGTTTTTCGCTG
TGGAAAAGCTTAACAAAGAG

Product: second ORF in transposon ISC1778

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MHFTYSIKNSEREKSKELIKEYRTLLQKAIDYLWNLTKIQVRKKNGNYKITLPKKKEVYKPLREELEKINHLASHYVDKA
INDAFSILKSWRKRAIKGRASIEKPRVKKAYVRIKTTLRKVVGESVRITVRPHEYITFSWSKSWFSRRVKELELGEPIIK
EEKVYLPFRYKLPWVTPVNFLAIDSNLYTLDAYDGEKFVTISLKQLYSLKYSMEVKRAKVQSFASKHTKRERVDEEVFA

Sequences:

>Translated_239_residues
MHFTYSIKNSEREKSKELIKEYRTLLQKAIDYLWNLTKIQVRKKNGNYKITLPKKKEVYKPLREELEKINHLASHYVDKA
INDAFSILKSWRKRAIKGRASIEKPRVKKAYVRIKTTLRKVVGESVRITVRPHEYITFSWSKSWFSRRVKELELGEPIIK
EEKVYLPFRYKLPWVTPVNFLAIDSNLYTLDAYDGEKFVTISLKQLYSLKYSMEVKRAKVQSFASKHTKRERVDEEVFA
>Mature_239_residues
MHFTYSIKNSEREKSKELIKEYRTLLQKAIDYLWNLTKIQVRKKNGNYKITLPKKKEVYKPLREELEKINHLASHYVDKA
INDAFSILKSWRKRAIKGRASIEKPRVKKAYVRIKTTLRKVVGESVRITVRPHEYITFSWSKSWFSRRVKELELGEPIIK
EEKVYLPFRYKLPWVTPVNFLAIDSNLYTLDAYDGEKFVTISLKQLYSLKYSMEVKRAKVQSFASKHTKRERVDEEVFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095 [H]

Pfam domain/function: PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 28527; Mature: 28527

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFTYSIKNSEREKSKELIKEYRTLLQKAIDYLWNLTKIQVRKKNGNYKITLPKKKEVYK
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCEEEEECCHHHHHH
PLREELEKINHLASHYVDKAINDAFSILKSWRKRAIKGRASIEKPRVKKAYVRIKTTLRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VVGESVRITVRPHEYITFSWSKSWFSRRVKELELGEPIIKEEKVYLPFRYKLPWVTPVNF
HCCCCEEEEECCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEE
LAIDSNLYTLDAYDGEKFVTISLKQLYSLKYSMEVKRAKVQSFASKHTKRERVDEEVFA
EEECCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHFTYSIKNSEREKSKELIKEYRTLLQKAIDYLWNLTKIQVRKKNGNYKITLPKKKEVYK
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCEEEEECCHHHHHH
PLREELEKINHLASHYVDKAINDAFSILKSWRKRAIKGRASIEKPRVKKAYVRIKTTLRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VVGESVRITVRPHEYITFSWSKSWFSRRVKELELGEPIIKEEKVYLPFRYKLPWVTPVNF
HCCCCEEEEECCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEE
LAIDSNLYTLDAYDGEKFVTISLKQLYSLKYSMEVKRAKVQSFASKHTKRERVDEEVFA
EEECCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]