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The map label for this gene is 15898190

Identifier: 15898190

GI number: 15898190

Start: 1186104

End: 1186691

Strand: Reverse

Name: 15898190

Synonym: SSO1349

Alternate gene names: NA

Gene position: 1186691-1186104 (Counterclockwise)

Preceding gene: 15898194

Following gene: 15898189

Centisome position: 39.66

GC content: 37.93

Gene sequence:

>588_bases
ATGCTAAGACCAAAGGAAGCATGCCAAAGACTAGGAATATCCTATGCAACACTTAGAGAATACGTTAAGAAAGGATACAT
AAAACCAGTTATACTACAGAGCGGAAAATGGAGATTCAGAGAAGAAGACATAGAGAGGCTAATGGGAATTATTAGAAAAA
GAAAAGTAATACTTTACGCTAGAGTATCATCTTCCACGCAAAAAGACGATCTAGTAAACCAAGTGAAGTACCTAGAGGAA
CAAGTCAAAGAATACGACCAAGTAATCACAGACATAGGTTCCGGGTTAAACATGAAGAGAAAGGGGTTCTTGAAGTTGTT
GAGAATGATATTAAATAACGAAGTATCACGCGTAGTTGTTGCTTACCCAGACAGACTTGTTAGATTCGGTTTCGAAATCC
TAGAGGAAGTGTGCAAAGCACACAACTGTGAAATAGTAGTACTAAACCAAGAGGACAAAGAGGAAGAACTAGTTGAAGAC
CTAATGTCAGCACTAGTCTCGTTCAGCGGGAAACTGTATGGTATGAGAAGTCATAAATACGAAAAGGTGAAGAAATGTGC
TGAAGAACTTAAGAATTGGAAAATTTGA

Upstream 100 bases:

>100_bases
TCTAATATTATCAACTTTCTTTGTCTTTAGTCGGAAGCCGTTGCCAACAGTTTCCGATAAACCGTAAAGTTTATATTATT
TTGCCACAAACTCTTATACA

Downstream 100 bases:

>100_bases
ACCGGAAGAGGAATACGTTAGTGCCTTCAGAAAGTCTATAGCTTTAGGCAAAGGATATACCACTAGATCATAGTCTAAGA
ACTTTTCCAAAATACTAGTG

Product: transposon ISC1778 Orf1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDIERLMGIIRKRKVILYARVSSSTQKDDLVNQVKYLEE
QVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVVAYPDRLVRFGFEILEEVCKAHNCEIVVLNQEDKEEELVED
LMSALVSFSGKLYGMRSHKYEKVKKCAEELKNWKI

Sequences:

>Translated_195_residues
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDIERLMGIIRKRKVILYARVSSSTQKDDLVNQVKYLEE
QVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVVAYPDRLVRFGFEILEEVCKAHNCEIVVLNQEDKEEELVED
LMSALVSFSGKLYGMRSHKYEKVKKCAEELKNWKI
>Mature_195_residues
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDIERLMGIIRKRKVILYARVSSSTQKDDLVNQVKYLEE
QVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVVAYPDRLVRFGFEILEEVCKAHNCEIVVLNQEDKEEELVED
LMSALVSFSGKLYGMRSHKYEKVKKCAEELKNWKI

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 22911; Mature: 22911

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDIERLMGIIRKRKVILYA
CCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEE
RVSSSTQKDDLVNQVKYLEEQVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHEEHH
AYPDRLVRFGFEILEEVCKAHNCEIVVLNQEDKEEELVEDLMSALVSFSGKLYGMRSHKY
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHH
EKVKKCAEELKNWKI
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDIERLMGIIRKRKVILYA
CCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEE
RVSSSTQKDDLVNQVKYLEEQVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHEEHH
AYPDRLVRFGFEILEEVCKAHNCEIVVLNQEDKEEELVEDLMSALVSFSGKLYGMRSHKY
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHH
EKVKKCAEELKNWKI
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]