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The map label for this gene is 15898188

Identifier: 15898188

GI number: 15898188

Start: 1184788

End: 1185339

Strand: Reverse

Name: 15898188

Synonym: SSO1347

Alternate gene names: NA

Gene position: 1185339-1184788 (Counterclockwise)

Preceding gene: 15898189

Following gene: 15898186

Centisome position: 39.61

GC content: 46.2

Gene sequence:

>552_bases
TTGCATCAAAGCACACGAAGAGGGAGAGAGTTGATGAGGAAGTATTCGCATAGGGAGAGGAATCGCGTTCTGGACTTCGT
TCACAAGTTTGTAAACACTTTGTTGGACTTGTACCCCATGACGTTTTTCGCTGTGGAAAAGCTTAACAAAGAGAGTATGT
TTAAGGATGCTAATGACTCTCTTTCGAGGAAGATTTCTAGGACTGTTTGGAGGAGTATACACAGAGTGTTGAAGTACAAG
GCTCCGCTTTACGGTTCTTTCGTTAAGGAAGTGAACCCGTACCTCACCTCGAGGTCTTGCCCCAGATGTAGGTTTGTATC
CCGAAAGGTTGGTAAGACCTTTGAGTGTGAGAGGTGCGGGTTCAAGTTAGATAGGCAATTGAATGCTTCACTGAATATTT
ATCTCAAGATGTGCGGATTCCCTCACATCCGTGAAATAGCGCGGGTGTGGGTTGGGGTTATTCCGCTAATGGGGCGGAGA
AGGATGAACGTCCGCGACTTCGGTGAAGCCCAAGGGCTGAGGGTTGATATTAAATATCATGAAATCCCATGA

Upstream 100 bases:

>100_bases
CTAGATGCTTATGATGGTGAGAAATTCGTTACAATCTCTCTGAAGCAGTTGTACTCCCTTAAGTACTCCATGGAGGTGAA
GAGGGCTAAGGTGCAATCAT

Downstream 100 bases:

>100_bases
AGCCCAAACCCCTGGGGAATATACGATCAGAGCTTTCAAGTAGGAGGGATTGAGTGTCCAAACAATATACTACCCCATCA
ACACCTCCAGAAACCCTCCA

Product: third ORF in transposon ISC1778

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MHQSTRRGRELMRKYSHRERNRVLDFVHKFVNTLLDLYPMTFFAVEKLNKESMFKDANDSLSRKISRTVWRSIHRVLKYK
APLYGSFVKEVNPYLTSRSCPRCRFVSRKVGKTFECERCGFKLDRQLNASLNIYLKMCGFPHIREIARVWVGVIPLMGRR
RMNVRDFGEAQGLRVDIKYHEIP

Sequences:

>Translated_183_residues
MHQSTRRGRELMRKYSHRERNRVLDFVHKFVNTLLDLYPMTFFAVEKLNKESMFKDANDSLSRKISRTVWRSIHRVLKYK
APLYGSFVKEVNPYLTSRSCPRCRFVSRKVGKTFECERCGFKLDRQLNASLNIYLKMCGFPHIREIARVWVGVIPLMGRR
RMNVRDFGEAQGLRVDIKYHEIP
>Mature_183_residues
MHQSTRRGRELMRKYSHRERNRVLDFVHKFVNTLLDLYPMTFFAVEKLNKESMFKDANDSLSRKISRTVWRSIHRVLKYK
APLYGSFVKEVNPYLTSRSCPRCRFVSRKVGKTFECERCGFKLDRQLNASLNIYLKMCGFPHIREIARVWVGVIPLMGRR
RMNVRDFGEAQGLRVDIKYHEIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 35 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010095
- InterPro:   IPR013083 [H]

Pfam domain/function: PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 21820; Mature: 21820

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQSTRRGRELMRKYSHRERNRVLDFVHKFVNTLLDLYPMTFFAVEKLNKESMFKDANDS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHH
LSRKISRTVWRSIHRVLKYKAPLYGSFVKEVNPYLTSRSCPRCRFVSRKVGKTFECERCG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHCC
FKLDRQLNASLNIYLKMCGFPHIREIARVWVGVIPLMGRRRMNVRDFGEAQGLRVDIKYH
CHHHHHCCCHHEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEC
EIP
CCC
>Mature Secondary Structure
MHQSTRRGRELMRKYSHRERNRVLDFVHKFVNTLLDLYPMTFFAVEKLNKESMFKDANDS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHH
LSRKISRTVWRSIHRVLKYKAPLYGSFVKEVNPYLTSRSCPRCRFVSRKVGKTFECERCG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHCC
FKLDRQLNASLNIYLKMCGFPHIREIARVWVGVIPLMGRRRMNVRDFGEAQGLRVDIKYH
CHHHHHCCCHHEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEC
EIP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]