Click here to switch to the map view.

The map label for this gene is aceB/mas [H]

Identifier: 15898177

GI number: 15898177

Start: 1170115

End: 1172595

Strand: Reverse

Name: aceB/mas [H]

Synonym: SSO1334

Alternate gene names: 15898177

Gene position: 1172595-1170115 (Counterclockwise)

Preceding gene: 15898181

Following gene: 15898176

Centisome position: 39.19

GC content: 40.23

Gene sequence:

>2481_bases
ATGTCTTCTAGCCTTAAAATCCCTGAGGAGATCTATCAAAAGTATAGTGACCTATTCGGAGAAAAGACCATAAACGATAG
GATTGTAAGTGTTGAAAAACTAATTGAGGAGCTCGCAGTTGAGTTCTCAGATGAGATAAGAAAGGTTATTAATAAAAGGC
GACTATGGTTAGAATCAAAAGACCCCGTGACCTCAAAAGGTGCTTTTCCATCCTTTGACGAAGTCTTTGTAGATGCTGAT
GGAAATAAGAGAACCTTTAGGGAAATCATTCAAGGGATGATAGATAACTTCCTCGGGGTACAGTCAAAGCTAAAATGGAG
GTTAAATGAAAATGTACCAATACCAAAGGACGCACATCCCCTCAATAACCCAGGGTTAGAAATCACTGGACCTTGGTATC
CTCTGAGTAGGGCGTATAATCAAATAAACTCAGACGTAGCATGTGTTATGGAAGATGAGGAAGACGCCTCACCTGCATGG
TATATACCCTTTGGTTCTGGTAAAACAATTGCTGACGTATGGGAGGGAAGAAAGAACGTAAAACTCTTCCTCTCCGGTAA
GGCTCCAAATCCTTATTACGAGAAGGGAAAAACGTACAGCTTAAACAAACCTAGGGATAAGTGGCCAGTGATTTTCCACA
GACTCCCTGGATTACACCTCTTGGATTTCGATATAACGTTAAATGGTAAACCAGTACCGGCTATAATTGTTTCTGCCGTT
ATATATACCCTAAACAATTATAATAGTCTGAAGAGTGCGGGTTCTGGAGTATATTTCTATCTACCTAAAACCCAGACACC
GGATGAGGCATTGATAATAGAAAAGATCTTGAGAAGAATCGAGTCTAAACTAGGACTTAAGATAGGTACACTTAAGCTCG
CTCTCCTTTATGAGGAGGTCAATGCTGGAAGATTTTTCCCTGTAATACTGTGGATATTTCGTGAGAGACTCATAAAATCA
AATAACGGTAGATGGGACTATTTGGGAAGTCTGATTGAGATGTGGTTACAAGAGAAAGTACTTCCAGATCCCCAAAACAT
TACCATGACCTCACCAAACATGATGGCTTATCAAAAGTACAACGCACTCATGATGCTATTAGCTGGGGCGAAGAACGGCG
AAGCCGATGCTGCTCCAGTAGGTGGTATGGCGGCAGTAATGCTCTACCCTCAAACTGACCCATTCGGGAGAAATAGATAC
AACTTAAAGGCATTAAGGGGAATAAAGCTAGATAAGTTAAGGGAGAGGCTAATAGGACTTATCTTTGTGGCAGAGGGTAA
AGTTGAAGGTAAAATCACTTTAGAGGATATAGTTAACGGAAAAGTAAAGGGTAAACTTTACGATATGTTCAGACAGAGTT
GGGTAGCGACTAAGGAAGAAGCTTATGTAGAGGCAGGGAGCAAACCCTTAAGGGCAAGTTTAGATGAGTTACAGAAAATG
ATTGACGCACCAATTAATTACATTGAGGTAGAGGGAACCAAATTACCCACCGTGGATAGTGGGTTAACACCAGAAGAAAG
AGCGTTATTCCAAAAGCTTGGCCTAATTGATGAAAGAGGAAAAATAACGCCTTGGGTTATAACCAAGGAAATGATTAACA
CTCCAGAAAAGCTATTATTTAATAAGGAATTATGGGGTGGAAAAGACCTATGGCATTCGTTATATGACATCCCAGAGGGA
GACATTACACCAGAACACGTTCAACACGCGTTTTATATGGCAGCGAATTACGGTTTCCAATTGCTAAATGGCAACTTAGC
TGCGGCAATAGATGATTATGAATTAAAGCAAAGGTTCATGAACGACTTAGCTACCTATAGAATATTCACTTCTTGGCTAT
GGAGTGTAATAAATAGGGATGCTAGCTTCACAAAGGATGGATATATTAAGGGACCAAAGCTAACTAAGGATGGTGTAATT
CCAGCTGAAGACGTTCTAAAGGTCACAAAGGGGACGAAGGTAAAGGATATATTCGAGAAGTTGTGGGAGTTACACTTAGA
TTGGACATATGAGTTTTACAAAGAACAAGATATGAGAGCGTCTAGGAGAATAGCTGAAACCTTTGGAAAGACAAATAACG
CTTCAACGGTGGAAGAGGTGTATAAGGTAATATCTAAGGCTTATAGTTCAGGTCCGTTTAGGGAGATGTCTGCTAAAGAA
GCTGCTCAGAAGCTGGCAAAAATCCTTAACGCTAACGCTTCTGAGATCGAGGAAGAGCTTATTAATTTGGCCCCGAGGTT
TGACAGATCAATGGCCCCAGTAATTATGGAAATATTAATGAAAGAGATGTTATATCCCAAGTACATAATGAATAGCGGGA
AGATACTCTTCATACTCTCTCCATTGGATCCAGAGAGGAGGTCAAAGGTAATGGATAGCATATTCTCGTTTAGAAAAATG
ATTGAAGATAAGGTAAAAAGAGGAGAACTGGATAAGTGGGTATTGGAGTTATACGACTACGTTTACGACAATTACTGGTA
A

Upstream 100 bases:

>100_bases
AAAAGAAATAAGTTCTTCCATAAGGTACTCCATATATCTAATTGAAACTTTTTTAGAAAAATTTAATAGTATTCTCCAAC
TTTTTAAAATTGGGGATCAA

Downstream 100 bases:

>100_bases
ATAGGTTAATTCTTATTATTTTTTAAACAAAAAATGAAGGGGACTCTTCTTTTTTGTAAAAAAATCGTAATTTACATAAG
GTTATCTCGTTCTACTGCCT

Product: malate synthase, putative (aceB/mas)

Products: NA

Alternate protein names: MSA [H]

Number of amino acids: Translated: 826; Mature: 825

Protein sequence:

>826_residues
MSSSLKIPEEIYQKYSDLFGEKTINDRIVSVEKLIEELAVEFSDEIRKVINKRRLWLESKDPVTSKGAFPSFDEVFVDAD
GNKRTFREIIQGMIDNFLGVQSKLKWRLNENVPIPKDAHPLNNPGLEITGPWYPLSRAYNQINSDVACVMEDEEDASPAW
YIPFGSGKTIADVWEGRKNVKLFLSGKAPNPYYEKGKTYSLNKPRDKWPVIFHRLPGLHLLDFDITLNGKPVPAIIVSAV
IYTLNNYNSLKSAGSGVYFYLPKTQTPDEALIIEKILRRIESKLGLKIGTLKLALLYEEVNAGRFFPVILWIFRERLIKS
NNGRWDYLGSLIEMWLQEKVLPDPQNITMTSPNMMAYQKYNALMMLLAGAKNGEADAAPVGGMAAVMLYPQTDPFGRNRY
NLKALRGIKLDKLRERLIGLIFVAEGKVEGKITLEDIVNGKVKGKLYDMFRQSWVATKEEAYVEAGSKPLRASLDELQKM
IDAPINYIEVEGTKLPTVDSGLTPEERALFQKLGLIDERGKITPWVITKEMINTPEKLLFNKELWGGKDLWHSLYDIPEG
DITPEHVQHAFYMAANYGFQLLNGNLAAAIDDYELKQRFMNDLATYRIFTSWLWSVINRDASFTKDGYIKGPKLTKDGVI
PAEDVLKVTKGTKVKDIFEKLWELHLDWTYEFYKEQDMRASRRIAETFGKTNNASTVEEVYKVISKAYSSGPFREMSAKE
AAQKLAKILNANASEIEEELINLAPRFDRSMAPVIMEILMKEMLYPKYIMNSGKILFILSPLDPERRSKVMDSIFSFRKM
IEDKVKRGELDKWVLELYDYVYDNYW

Sequences:

>Translated_826_residues
MSSSLKIPEEIYQKYSDLFGEKTINDRIVSVEKLIEELAVEFSDEIRKVINKRRLWLESKDPVTSKGAFPSFDEVFVDAD
GNKRTFREIIQGMIDNFLGVQSKLKWRLNENVPIPKDAHPLNNPGLEITGPWYPLSRAYNQINSDVACVMEDEEDASPAW
YIPFGSGKTIADVWEGRKNVKLFLSGKAPNPYYEKGKTYSLNKPRDKWPVIFHRLPGLHLLDFDITLNGKPVPAIIVSAV
IYTLNNYNSLKSAGSGVYFYLPKTQTPDEALIIEKILRRIESKLGLKIGTLKLALLYEEVNAGRFFPVILWIFRERLIKS
NNGRWDYLGSLIEMWLQEKVLPDPQNITMTSPNMMAYQKYNALMMLLAGAKNGEADAAPVGGMAAVMLYPQTDPFGRNRY
NLKALRGIKLDKLRERLIGLIFVAEGKVEGKITLEDIVNGKVKGKLYDMFRQSWVATKEEAYVEAGSKPLRASLDELQKM
IDAPINYIEVEGTKLPTVDSGLTPEERALFQKLGLIDERGKITPWVITKEMINTPEKLLFNKELWGGKDLWHSLYDIPEG
DITPEHVQHAFYMAANYGFQLLNGNLAAAIDDYELKQRFMNDLATYRIFTSWLWSVINRDASFTKDGYIKGPKLTKDGVI
PAEDVLKVTKGTKVKDIFEKLWELHLDWTYEFYKEQDMRASRRIAETFGKTNNASTVEEVYKVISKAYSSGPFREMSAKE
AAQKLAKILNANASEIEEELINLAPRFDRSMAPVIMEILMKEMLYPKYIMNSGKILFILSPLDPERRSKVMDSIFSFRKM
IEDKVKRGELDKWVLELYDYVYDNYW
>Mature_825_residues
SSSLKIPEEIYQKYSDLFGEKTINDRIVSVEKLIEELAVEFSDEIRKVINKRRLWLESKDPVTSKGAFPSFDEVFVDADG
NKRTFREIIQGMIDNFLGVQSKLKWRLNENVPIPKDAHPLNNPGLEITGPWYPLSRAYNQINSDVACVMEDEEDASPAWY
IPFGSGKTIADVWEGRKNVKLFLSGKAPNPYYEKGKTYSLNKPRDKWPVIFHRLPGLHLLDFDITLNGKPVPAIIVSAVI
YTLNNYNSLKSAGSGVYFYLPKTQTPDEALIIEKILRRIESKLGLKIGTLKLALLYEEVNAGRFFPVILWIFRERLIKSN
NGRWDYLGSLIEMWLQEKVLPDPQNITMTSPNMMAYQKYNALMMLLAGAKNGEADAAPVGGMAAVMLYPQTDPFGRNRYN
LKALRGIKLDKLRERLIGLIFVAEGKVEGKITLEDIVNGKVKGKLYDMFRQSWVATKEEAYVEAGSKPLRASLDELQKMI
DAPINYIEVEGTKLPTVDSGLTPEERALFQKLGLIDERGKITPWVITKEMINTPEKLLFNKELWGGKDLWHSLYDIPEGD
ITPEHVQHAFYMAANYGFQLLNGNLAAAIDDYELKQRFMNDLATYRIFTSWLWSVINRDASFTKDGYIKGPKLTKDGVIP
AEDVLKVTKGTKVKDIFEKLWELHLDWTYEFYKEQDMRASRRIAETFGKTNNASTVEEVYKVISKAYSSGPFREMSAKEA
AQKLAKILNANASEIEEELINLAPRFDRSMAPVIMEILMKEMLYPKYIMNSGKILFILSPLDPERRSKVMDSIFSFRKMI
EDKVKRGELDKWVLELYDYVYDNYW

Specific function: Glyoxylate bypass; second step. [C]

COG id: COG2225

COG function: function code C; Malate synthase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the malate synthase family [H]

Homologues:

Organism=Escherichia coli, GI1790444, Length=332, Percent_Identity=31.0240963855422, Blast_Score=122, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI71982926, Length=401, Percent_Identity=28.428927680798, Blast_Score=109, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17561814, Length=401, Percent_Identity=28.428927680798, Blast_Score=109, Evalue=8e-24,
Organism=Saccharomyces cerevisiae, GI6322222, Length=353, Percent_Identity=30.028328611898, Blast_Score=100, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6324212, Length=351, Percent_Identity=29.6296296296296, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011076
- InterPro:   IPR006252
- InterPro:   IPR001465
- InterPro:   IPR019830 [H]

Pfam domain/function: PF01274 Malate_synthase [H]

EC number: =2.3.3.9 [H]

Molecular weight: Translated: 94703; Mature: 94572

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSLKIPEEIYQKYSDLFGEKTINDRIVSVEKLIEELAVEFSDEIRKVINKRRLWLESK
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCC
DPVTSKGAFPSFDEVFVDADGNKRTFREIIQGMIDNFLGVQSKLKWRLNENVPIPKDAHP
CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCCCCC
LNNPGLEITGPWYPLSRAYNQINSDVACVMEDEEDASPAWYIPFGSGKTIADVWEGRKNV
CCCCCCEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHCCCCCE
KLFLSGKAPNPYYEKGKTYSLNKPRDKWPVIFHRLPGLHLLDFDITLNGKPVPAIIVSAV
EEEEECCCCCCHHHCCCEECCCCCCCCCCCHHHCCCCCEEEEEEEEECCCCHHHHHHHHH
IYTLNNYNSLKSAGSGVYFYLPKTQTPDEALIIEKILRRIESKLGLKIGTLKLALLYEEV
HHHHCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEHHEEEEEEHHHH
NAGRFFPVILWIFRERLIKSNNGRWDYLGSLIEMWLQEKVLPDPQNITMTSPNMMAYQKY
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHH
NALMMLLAGAKNGEADAAPVGGMAAVMLYPQTDPFGRNRYNLKALRGIKLDKLRERLIGL
HHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHEE
IFVAEGKVEGKITLEDIVNGKVKGKLYDMFRQSWVATKEEAYVEAGSKPLRASLDELQKM
EEEECCCCCCCEEHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHH
IDAPINYIEVEGTKLPTVDSGLTPEERALFQKLGLIDERGKITPWVITKEMINTPEKLLF
HHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHCCHHHHHC
NKELWGGKDLWHSLYDIPEGDITPEHVQHAFYMAANYGFQLLNGNLAAAIDDYELKQRFM
CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCCEEEEECHHHHHHHHH
NDLATYRIFTSWLWSVINRDASFTKDGYIKGPKLTKDGVIPAEDVLKVTKGTKVKDIFEK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH
LWELHLDWTYEFYKEQDMRASRRIAETFGKTNNASTVEEVYKVISKAYSSGPFREMSAKE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
AAQKLAKILNANASEIEEELINLAPRFDRSMAPVIMEILMKEMLYPKYIMNSGKILFILS
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHCCCCEEEEEC
PLDPERRSKVMDSIFSFRKMIEDKVKRGELDKWVLELYDYVYDNYW
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSSLKIPEEIYQKYSDLFGEKTINDRIVSVEKLIEELAVEFSDEIRKVINKRRLWLESK
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCC
DPVTSKGAFPSFDEVFVDADGNKRTFREIIQGMIDNFLGVQSKLKWRLNENVPIPKDAHP
CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCCCCC
LNNPGLEITGPWYPLSRAYNQINSDVACVMEDEEDASPAWYIPFGSGKTIADVWEGRKNV
CCCCCCEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHCCCCCE
KLFLSGKAPNPYYEKGKTYSLNKPRDKWPVIFHRLPGLHLLDFDITLNGKPVPAIIVSAV
EEEEECCCCCCHHHCCCEECCCCCCCCCCCHHHCCCCCEEEEEEEEECCCCHHHHHHHHH
IYTLNNYNSLKSAGSGVYFYLPKTQTPDEALIIEKILRRIESKLGLKIGTLKLALLYEEV
HHHHCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEHHEEEEEEHHHH
NAGRFFPVILWIFRERLIKSNNGRWDYLGSLIEMWLQEKVLPDPQNITMTSPNMMAYQKY
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHH
NALMMLLAGAKNGEADAAPVGGMAAVMLYPQTDPFGRNRYNLKALRGIKLDKLRERLIGL
HHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHEE
IFVAEGKVEGKITLEDIVNGKVKGKLYDMFRQSWVATKEEAYVEAGSKPLRASLDELQKM
EEEECCCCCCCEEHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHH
IDAPINYIEVEGTKLPTVDSGLTPEERALFQKLGLIDERGKITPWVITKEMINTPEKLLF
HHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHCCHHHHHC
NKELWGGKDLWHSLYDIPEGDITPEHVQHAFYMAANYGFQLLNGNLAAAIDDYELKQRFM
CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCCEEEEECHHHHHHHHH
NDLATYRIFTSWLWSVINRDASFTKDGYIKGPKLTKDGVIPAEDVLKVTKGTKVKDIFEK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH
LWELHLDWTYEFYKEQDMRASRRIAETFGKTNNASTVEEVYKVISKAYSSGPFREMSAKE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
AAQKLAKILNANASEIEEELINLAPRFDRSMAPVIMEILMKEMLYPKYIMNSGKILFILS
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHCCCCEEEEEC
PLDPERRSKVMDSIFSFRKMIEDKVKRGELDKWVLELYDYVYDNYW
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3050899; 3060852; 8265357; 9278503 [H]