| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is dppD-2 [H]
Identifier: 15898124
GI number: 15898124
Start: 1106938
End: 1107909
Strand: Reverse
Name: dppD-2 [H]
Synonym: SSO1282
Alternate gene names: 15898124
Gene position: 1107909-1106938 (Counterclockwise)
Preceding gene: 15898125
Following gene: 15898123
Centisome position: 37.03
GC content: 36.73
Gene sequence:
>972_bases TTGAGTTTACAAGTTAGGGACCTTAACATATCCTACAAGATTGGCAAAGGGTCAATTAGGGCTATTAATAGAGTGTATTT TCAATTGGAGAAGGGTGATTCTTTAGGAGTGATTGGTGAGACAGGTTCCGGAAAAACCACAATTGCTAATGCTATTATGA GGGCATTGCCCGAAAATGCAGAATATTCTGGTAGCATTTTTTTTAATAATAAGGATATTTTGAAAATGGATCAAGAAACC TACAGAAAGGAGATAAGATGGAAGAAAATATCGATAATACCCCAATACTCTATGAATGCGTTTAATCCCATAAAGAGGGT TGGTGAACAATTAGTAAAGATAATGATGGAAAATGATAGTAATATTGATACTAGTAAAGCTAGTGAAAGGATATTTTACC TATTTAATCAACTTAGTTTGCCACCAGAGATCTATAAGAAGCTTCCAGACGAACTATCTGGAGGACAGAGACAAAGAGTT GTAATTGCCTCAGCCCTATTATTAGACCCAGAATTAGTAATTGCAGACGAACCGACTACTGCATTAGATGTTATAAACCA AGCAAGGGTCATATCTTTAATTAAGAGGGAAATTGTGGATAAGCAAAAGACTTTAATCTACATTACTCATGATATAGCAG TTGTTGCTGGAGTTGCTAAGAAGGTACTAACACTTTATGCCGGAGAGATAATGGAGTTCGGAGATTCTCGTAAAATCTTC AAGGAACCACTACATCCCTACTCTAAGGGCTTACTGTCCTCAGTACCGGATATTAGATTTGGTAAGGTAAAGAAAGTGCA TTATATTCCAGGTGATCCACCAGATCTGTCAAAGGAGATTAAAGGGTGTCCATTTGCACCAAGATGTTCGATAGCTAAAG ATATATGTAAGGTTGAAAAACCAAAATTAAGATATGTGGATGGAAGGTACGTGGCTTGTCATCTTGTAGGAGGGGAAGAA AATGGACAATAA
Upstream 100 bases:
>100_bases TTCTGACACCAGGTATAGCGTTATTTCTCTTGGGCGTTAGTCTATTTTATATAGGTGAGGCGATAACTAGGTATTATGGA AGTTTAGTTGGTGAGACCCA
Downstream 100 bases:
>100_bases TGAGATTATCGTAAAAGTTCAAAATGTTTGGATAAAGTATCCCATGGGTAGAGTTGGATTATTTAGGAAACTTTACGTAC ATGCAGTTAACGACGTTTCT
Product: oligo/dipeptide transport, ATP binding protein. (dppD-2)
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSLQVRDLNISYKIGKGSIRAINRVYFQLEKGDSLGVIGETGSGKTTIANAIMRALPENAEYSGSIFFNNKDILKMDQET YRKEIRWKKISIIPQYSMNAFNPIKRVGEQLVKIMMENDSNIDTSKASERIFYLFNQLSLPPEIYKKLPDELSGGQRQRV VIASALLLDPELVIADEPTTALDVINQARVISLIKREIVDKQKTLIYITHDIAVVAGVAKKVLTLYAGEIMEFGDSRKIF KEPLHPYSKGLLSSVPDIRFGKVKKVHYIPGDPPDLSKEIKGCPFAPRCSIAKDICKVEKPKLRYVDGRYVACHLVGGEE NGQ
Sequences:
>Translated_323_residues MSLQVRDLNISYKIGKGSIRAINRVYFQLEKGDSLGVIGETGSGKTTIANAIMRALPENAEYSGSIFFNNKDILKMDQET YRKEIRWKKISIIPQYSMNAFNPIKRVGEQLVKIMMENDSNIDTSKASERIFYLFNQLSLPPEIYKKLPDELSGGQRQRV VIASALLLDPELVIADEPTTALDVINQARVISLIKREIVDKQKTLIYITHDIAVVAGVAKKVLTLYAGEIMEFGDSRKIF KEPLHPYSKGLLSSVPDIRFGKVKKVHYIPGDPPDLSKEIKGCPFAPRCSIAKDICKVEKPKLRYVDGRYVACHLVGGEE NGQ >Mature_322_residues SLQVRDLNISYKIGKGSIRAINRVYFQLEKGDSLGVIGETGSGKTTIANAIMRALPENAEYSGSIFFNNKDILKMDQETY RKEIRWKKISIIPQYSMNAFNPIKRVGEQLVKIMMENDSNIDTSKASERIFYLFNQLSLPPEIYKKLPDELSGGQRQRVV IASALLLDPELVIADEPTTALDVINQARVISLIKREIVDKQKTLIYITHDIAVVAGVAKKVLTLYAGEIMEFGDSRKIFK EPLHPYSKGLLSSVPDIRFGKVKKVHYIPGDPPDLSKEIKGCPFAPRCSIAKDICKVEKPKLRYVDGRYVACHLVGGEEN GQ
Specific function: Part of the binding-protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI42490749, Length=247, Percent_Identity=25.9109311740891, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI153792144, Length=201, Percent_Identity=27.8606965174129, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI89111135, Length=259, Percent_Identity=25.0965250965251, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI9955963, Length=236, Percent_Identity=25.8474576271186, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI171184400, Length=234, Percent_Identity=26.9230769230769, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI190343023, Length=244, Percent_Identity=27.4590163934426, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI27436953, Length=199, Percent_Identity=26.1306532663317, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI48994883, Length=314, Percent_Identity=42.3566878980892, Blast_Score=259, Evalue=1e-70, Organism=Escherichia coli, GI1789963, Length=321, Percent_Identity=35.202492211838, Blast_Score=196, Evalue=1e-51, Organism=Escherichia coli, GI1787759, Length=299, Percent_Identity=34.7826086956522, Blast_Score=192, Evalue=3e-50, Organism=Escherichia coli, GI1789962, Length=332, Percent_Identity=34.3373493975904, Blast_Score=191, Evalue=4e-50, Organism=Escherichia coli, GI1787500, Length=322, Percent_Identity=32.6086956521739, Blast_Score=181, Evalue=4e-47, Organism=Escherichia coli, GI145693107, Length=282, Percent_Identity=36.1702127659575, Blast_Score=171, Evalue=6e-44, Organism=Escherichia coli, GI1787548, Length=331, Percent_Identity=30.2114803625378, Blast_Score=160, Evalue=8e-41, Organism=Escherichia coli, GI1787758, Length=319, Percent_Identity=30.4075235109718, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1788506, Length=260, Percent_Identity=34.6153846153846, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI48994997, Length=258, Percent_Identity=30.6201550387597, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1789890, Length=234, Percent_Identity=30.3418803418803, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787547, Length=257, Percent_Identity=27.6264591439689, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1789891, Length=211, Percent_Identity=31.2796208530806, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787089, Length=255, Percent_Identity=27.843137254902, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI1790162, Length=254, Percent_Identity=27.1653543307087, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1786398, Length=244, Percent_Identity=27.8688524590164, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788225, Length=235, Percent_Identity=27.6595744680851, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789032, Length=227, Percent_Identity=25.9911894273128, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1788450, Length=235, Percent_Identity=25.1063829787234, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI87081834, Length=225, Percent_Identity=27.5555555555556, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1790739, Length=267, Percent_Identity=25.8426966292135, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786703, Length=235, Percent_Identity=26.8085106382979, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786345, Length=233, Percent_Identity=25.7510729613734, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87081791, Length=258, Percent_Identity=24.4186046511628, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788761, Length=248, Percent_Identity=24.5967741935484, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI87081709, Length=242, Percent_Identity=26.0330578512397, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789991, Length=217, Percent_Identity=24.8847926267281, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787105, Length=233, Percent_Identity=28.755364806867, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788644, Length=125, Percent_Identity=32.8, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787029, Length=234, Percent_Identity=26.0683760683761, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786872, Length=223, Percent_Identity=28.2511210762332, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787712, Length=244, Percent_Identity=25.4098360655738, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786698, Length=227, Percent_Identity=27.7533039647577, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1790534, Length=205, Percent_Identity=27.8048780487805, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787370, Length=231, Percent_Identity=25.5411255411255, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789672, Length=246, Percent_Identity=24.390243902439, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790190, Length=222, Percent_Identity=26.1261261261261, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI87082267, Length=244, Percent_Identity=23.3606557377049, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790467, Length=116, Percent_Identity=33.6206896551724, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786319, Length=234, Percent_Identity=26.0683760683761, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1786803, Length=243, Percent_Identity=24.2798353909465, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1787143, Length=258, Percent_Identity=24.4186046511628, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI48994943, Length=245, Percent_Identity=22.4489795918367, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71992285, Length=245, Percent_Identity=26.530612244898, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17555318, Length=222, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193202349, Length=248, Percent_Identity=23.3870967741935, Blast_Score=68, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17558664, Length=239, Percent_Identity=24.6861924686192, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193208177, Length=233, Percent_Identity=26.1802575107296, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17567265, Length=233, Percent_Identity=24.4635193133047, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17541710, Length=220, Percent_Identity=25.9090909090909, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI115535101, Length=232, Percent_Identity=25.4310344827586, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322980, Length=270, Percent_Identity=29.6296296296296, Blast_Score=83, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6324985, Length=253, Percent_Identity=23.7154150197628, Blast_Score=79, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6323959, Length=229, Percent_Identity=27.9475982532751, Blast_Score=73, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6322640, Length=241, Percent_Identity=26.1410788381743, Blast_Score=73, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6322957, Length=264, Percent_Identity=25.7575757575758, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321752, Length=236, Percent_Identity=26.271186440678, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324498, Length=226, Percent_Identity=25.6637168141593, Blast_Score=62, Evalue=9e-11, Organism=Drosophila melanogaster, GI24650855, Length=214, Percent_Identity=31.7757009345794, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24650853, Length=214, Percent_Identity=31.7757009345794, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281362751, Length=214, Percent_Identity=31.7757009345794, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI85726357, Length=240, Percent_Identity=24.5833333333333, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI21357907, Length=224, Percent_Identity=26.7857142857143, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24641565, Length=219, Percent_Identity=30.1369863013699, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI45551501, Length=245, Percent_Identity=27.3469387755102, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI17136662, Length=221, Percent_Identity=25.7918552036199, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI45551502, Length=245, Percent_Identity=27.3469387755102, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24659289, Length=242, Percent_Identity=26.0330578512397, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552359, Length=246, Percent_Identity=24.7967479674797, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI45552337, Length=246, Percent_Identity=24.7967479674797, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI45552345, Length=246, Percent_Identity=24.7967479674797, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI45550972, Length=246, Percent_Identity=24.7967479674797, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI45552347, Length=246, Percent_Identity=24.7967479674797, Blast_Score=64, Evalue=1e-10, Organism=Drosophila melanogaster, GI21357851, Length=245, Percent_Identity=27.3469387755102, Blast_Score=64, Evalue=1e-10, Organism=Drosophila melanogaster, GI45552353, Length=246, Percent_Identity=24.7967479674797, Blast_Score=64, Evalue=1e-10, Organism=Drosophila melanogaster, GI24583969, Length=246, Percent_Identity=24.7967479674797, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 36249; Mature: 36117
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQVRDLNISYKIGKGSIRAINRVYFQLEKGDSLGVIGETGSGKTTIANAIMRALPENA CCEEEEEEEEEEEECCCHHHEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCC EYSGSIFFNNKDILKMDQETYRKEIRWKKISIIPQYSMNAFNPIKRVGEQLVKIMMENDS CCCCEEEECCCCCEECCHHHHHHHHCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC NIDTSKASERIFYLFNQLSLPPEIYKKLPDELSGGQRQRVVIASALLLDPELVIADEPTT CCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCCCEEEEEEHHHHCCCCEEEECCCCH ALDVINQARVISLIKREIVDKQKTLIYITHDIAVVAGVAKKVLTLYAGEIMEFGDSRKIF HHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KEPLHPYSKGLLSSVPDIRFGKVKKVHYIPGDPPDLSKEIKGCPFAPRCSIAKDICKVEK HHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCC PKLRYVDGRYVACHLVGGEENGQ CCEEEECCCEEEEEEECCCCCCC >Mature Secondary Structure SLQVRDLNISYKIGKGSIRAINRVYFQLEKGDSLGVIGETGSGKTTIANAIMRALPENA CEEEEEEEEEEEECCCHHHEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCC EYSGSIFFNNKDILKMDQETYRKEIRWKKISIIPQYSMNAFNPIKRVGEQLVKIMMENDS CCCCEEEECCCCCEECCHHHHHHHHCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC NIDTSKASERIFYLFNQLSLPPEIYKKLPDELSGGQRQRVVIASALLLDPELVIADEPTT CCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCCCEEEEEEHHHHCCCCEEEECCCCH ALDVINQARVISLIKREIVDKQKTLIYITHDIAVVAGVAKKVLTLYAGEIMEFGDSRKIF HHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KEPLHPYSKGLLSSVPDIRFGKVKKVHYIPGDPPDLSKEIKGCPFAPRCSIAKDICKVEK HHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCC PKLRYVDGRYVACHLVGGEENGQ CCEEEECCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]