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The map label for this gene is dppC-2 [H]

Identifier: 15898125

GI number: 15898125

Start: 1107906

End: 1109516

Strand: Reverse

Name: dppC-2 [H]

Synonym: SSO1283

Alternate gene names: 15898125

Gene position: 1109516-1107906 (Counterclockwise)

Preceding gene: 15898126

Following gene: 15898124

Centisome position: 37.08

GC content: 37.06

Gene sequence:

>1611_bases
GTGAATTTAATGAGAATTCCCCCAATATTAAGACTGAAGCTACTTTGGGTTGCGCTAATTATATTCATTTTTCTTTTAGG
GAGTATTGCATATGGTTTCTTTACAGCGCCTAAGGCAAACCCTTATACACCAGCTGGTCAGTATGCAGCTTCACCATATG
CAGTGCCTTCGTGGGCTTCAATCTTCTACGGTAATCTTCCACCTGACATAAAAGTACCTAATGATTATGATCTGATTGCT
GCGAAGACAGCATCTGTTATAAATTATTGGCATTTGTCTAACTTTACTTTTAACGGAGATGCTGTTATAATAATTTATAA
TAGTAGCTATGGACCCAAGGGAGAAACTAACTTCCAAAAGACACTTTATTCTTATGGAAACACTGGAAACGGGAGTGTAG
AGATAATAATAGAAGGAACTAATCCATTAAATTTAACTCTGTATCATGACTTTCTTTATAACTATTTATTGCCTAGAGAG
ACAAAATTTGGAGACTATGAATTCTATATCATCCAAGCCAGTATTTCCGCTTATGCTACAAACGCTTACTATACTTTTAA
TGGATATGTGATAAATCCGTCAAATGCCACATTTTGGTTGTTCTTAGCTGGGAACTACTTGCCAACAAATTTGGTTACGC
TCTCAACTGTATTTAAGTACTTAGGGAATGGAGGATGGAATTACATATTAGCATCTTCGGCATCAGCTGGAGAAACTCCA
TGGTTCTATACCTCAAATATACCTCCTAATGAAAGCGCAGTAGCTTCTGTTATAATGCTTCAAAGCATGTTTAATAGTAC
CGGAAATTACAAGGTGGAATTCACCATAAATTATATCCCAAACGGACCTAACTCCAAATTAGTAGTTTACTTATCTGACC
TTTATTTCGAATTTCTTGGTAGTAGATATGGAGTATTGGGTACTGATAATAATGGGGCTAGTGTGTTTGCAGAGTATTCA
CAAGGTGGAATATTCGACCTTGAACTCGCAATACTTGCTGGGTTGGCAATAGTATTCATAGGTGCGGTATTTGGCTTATT
TGCTGGTTATTATGGTGGGAAGTTGGATCAAATATTAACCTCATTTACTGATTTCATACTACTACTCCCTGGGTTAGCAA
TACTAATAGTCTTAATAACCATATTCCAACAAATCTTTACAGTTTTCCCTAAGGATATTTTAATCATAATAGTTTTAGTA
ATTCTAAGCTGGCCTCCTACGTCTAGAACAATAAGAGGACAAGTTCTCCAAGTTAGAAATATGGCATTCGTTGAAGCCGC
TAAGGCTTTAGGAATGTCCAATATGGAAATCATAAGAAAGCACGTGTTAAGGCACGTTTTCCCAATAATTATAGCACAGC
TAATCTTCGATATTCCAGCTGTGATAGGTATAGAGTCAGCCCTAGACTTTCTAGGTATTGGAATACTTAAATTCCCAACA
TGGGGTAATATGTTAGGGTTCTCAATTAATGCCTCACTAGACGCTCCTGGATTTGCATGGTGGTGGATTCTGACACCAGG
TATAGCGTTATTTCTCTTGGGCGTTAGTCTATTTTATATAGGTGAGGCGATAACTAGGTATTATGGAAGTTTAGTTGGTG
AGACCCATTGA

Upstream 100 bases:

>100_bases
TATTAACTGGATCGTTCTTTTTCCTAACACTCTACGCCCTAGTCGTACTTTACGCGATGGATCTAATATATCCATTAGTT
GATCCTAGAATAAAACTAAG

Downstream 100 bases:

>100_bases
GTTTACAAGTTAGGGACCTTAACATATCCTACAAGATTGGCAAAGGGTCAATTAGGGCTATTAATAGAGTGTATTTTCAA
TTGGAGAAGGGTGATTCTTT

Product: oligo/dipeptide transport, permease protein (dppC-2)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MNLMRIPPILRLKLLWVALIIFIFLLGSIAYGFFTAPKANPYTPAGQYAASPYAVPSWASIFYGNLPPDIKVPNDYDLIA
AKTASVINYWHLSNFTFNGDAVIIIYNSSYGPKGETNFQKTLYSYGNTGNGSVEIIIEGTNPLNLTLYHDFLYNYLLPRE
TKFGDYEFYIIQASISAYATNAYYTFNGYVINPSNATFWLFLAGNYLPTNLVTLSTVFKYLGNGGWNYILASSASAGETP
WFYTSNIPPNESAVASVIMLQSMFNSTGNYKVEFTINYIPNGPNSKLVVYLSDLYFEFLGSRYGVLGTDNNGASVFAEYS
QGGIFDLELAILAGLAIVFIGAVFGLFAGYYGGKLDQILTSFTDFILLLPGLAILIVLITIFQQIFTVFPKDILIIIVLV
ILSWPPTSRTIRGQVLQVRNMAFVEAAKALGMSNMEIIRKHVLRHVFPIIIAQLIFDIPAVIGIESALDFLGIGILKFPT
WGNMLGFSINASLDAPGFAWWWILTPGIALFLLGVSLFYIGEAITRYYGSLVGETH

Sequences:

>Translated_536_residues
MNLMRIPPILRLKLLWVALIIFIFLLGSIAYGFFTAPKANPYTPAGQYAASPYAVPSWASIFYGNLPPDIKVPNDYDLIA
AKTASVINYWHLSNFTFNGDAVIIIYNSSYGPKGETNFQKTLYSYGNTGNGSVEIIIEGTNPLNLTLYHDFLYNYLLPRE
TKFGDYEFYIIQASISAYATNAYYTFNGYVINPSNATFWLFLAGNYLPTNLVTLSTVFKYLGNGGWNYILASSASAGETP
WFYTSNIPPNESAVASVIMLQSMFNSTGNYKVEFTINYIPNGPNSKLVVYLSDLYFEFLGSRYGVLGTDNNGASVFAEYS
QGGIFDLELAILAGLAIVFIGAVFGLFAGYYGGKLDQILTSFTDFILLLPGLAILIVLITIFQQIFTVFPKDILIIIVLV
ILSWPPTSRTIRGQVLQVRNMAFVEAAKALGMSNMEIIRKHVLRHVFPIIIAQLIFDIPAVIGIESALDFLGIGILKFPT
WGNMLGFSINASLDAPGFAWWWILTPGIALFLLGVSLFYIGEAITRYYGSLVGETH
>Mature_536_residues
MNLMRIPPILRLKLLWVALIIFIFLLGSIAYGFFTAPKANPYTPAGQYAASPYAVPSWASIFYGNLPPDIKVPNDYDLIA
AKTASVINYWHLSNFTFNGDAVIIIYNSSYGPKGETNFQKTLYSYGNTGNGSVEIIIEGTNPLNLTLYHDFLYNYLLPRE
TKFGDYEFYIIQASISAYATNAYYTFNGYVINPSNATFWLFLAGNYLPTNLVTLSTVFKYLGNGGWNYILASSASAGETP
WFYTSNIPPNESAVASVIMLQSMFNSTGNYKVEFTINYIPNGPNSKLVVYLSDLYFEFLGSRYGVLGTDNNGASVFAEYS
QGGIFDLELAILAGLAIVFIGAVFGLFAGYYGGKLDQILTSFTDFILLLPGLAILIVLITIFQQIFTVFPKDILIIIVLV
ILSWPPTSRTIRGQVLQVRNMAFVEAAKALGMSNMEIIRKHVLRHVFPIIIAQLIFDIPAVIGIESALDFLGIGILKFPT
WGNMLGFSINASLDAPGFAWWWILTPGIALFLLGVSLFYIGEAITRYYGSLVGETH

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=223, Percent_Identity=31.390134529148, Blast_Score=96, Evalue=9e-21,
Organism=Escherichia coli, GI1788505, Length=229, Percent_Identity=31.0043668122271, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787054, Length=223, Percent_Identity=27.8026905829596, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787498, Length=223, Percent_Identity=30.9417040358744, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1789964, Length=233, Percent_Identity=29.6137339055794, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 59323; Mature: 59323

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLMRIPPILRLKLLWVALIIFIFLLGSIAYGFFTAPKANPYTPAGQYAASPYAVPSWAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHH
IFYGNLPPDIKVPNDYDLIAAKTASVINYWHLSNFTFNGDAVIIIYNSSYGPKGETNFQK
HHCCCCCCCCCCCCCCCEEEHHHHHHHEEEEECCEEECCCEEEEEECCCCCCCCCCHHHH
TLYSYGNTGNGSVEIIIEGTNPLNLTLYHDFLYNYLLPRETKFGDYEFYIIQASISAYAT
HHHHCCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHCCCCCCCCCEEEEEEEEEEEHEEE
NAYYTFNGYVINPSNATFWLFLAGNYLPTNLVTLSTVFKYLGNGGWNYILASSASAGETP
CEEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
WFYTSNIPPNESAVASVIMLQSMFNSTGNYKVEFTINYIPNGPNSKLVVYLSDLYFEFLG
EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEEEEEHHHHHHHHC
SRYGVLGTDNNGASVFAEYSQGGIFDLELAILAGLAIVFIGAVFGLFAGYYGGKLDQILT
CCCCEEECCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SFTDFILLLPGLAILIVLITIFQQIFTVFPKDILIIIVLVILSWPPTSRTIRGQVLQVRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
MAFVEAAKALGMSNMEIIRKHVLRHVFPIIIAQLIFDIPAVIGIESALDFLGIGILKFPT
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
WGNMLGFSINASLDAPGFAWWWILTPGIALFLLGVSLFYIGEAITRYYGSLVGETH
CCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLMRIPPILRLKLLWVALIIFIFLLGSIAYGFFTAPKANPYTPAGQYAASPYAVPSWAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHH
IFYGNLPPDIKVPNDYDLIAAKTASVINYWHLSNFTFNGDAVIIIYNSSYGPKGETNFQK
HHCCCCCCCCCCCCCCCEEEHHHHHHHEEEEECCEEECCCEEEEEECCCCCCCCCCHHHH
TLYSYGNTGNGSVEIIIEGTNPLNLTLYHDFLYNYLLPRETKFGDYEFYIIQASISAYAT
HHHHCCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHCCCCCCCCCEEEEEEEEEEEHEEE
NAYYTFNGYVINPSNATFWLFLAGNYLPTNLVTLSTVFKYLGNGGWNYILASSASAGETP
CEEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
WFYTSNIPPNESAVASVIMLQSMFNSTGNYKVEFTINYIPNGPNSKLVVYLSDLYFEFLG
EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEEEEEHHHHHHHHC
SRYGVLGTDNNGASVFAEYSQGGIFDLELAILAGLAIVFIGAVFGLFAGYYGGKLDQILT
CCCCEEECCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SFTDFILLLPGLAILIVLITIFQQIFTVFPKDILIIIVLVILSWPPTSRTIRGQVLQVRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
MAFVEAAKALGMSNMEIIRKHVLRHVFPIIIAQLIFDIPAVIGIESALDFLGIGILKFPT
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
WGNMLGFSINASLDAPGFAWWWILTPGIALFLLGVSLFYIGEAITRYYGSLVGETH
CCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]