| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is dppF-2 [H]
Identifier: 15898123
GI number: 15898123
Start: 1106211
End: 1106948
Strand: Reverse
Name: dppF-2 [H]
Synonym: SSO1281
Alternate gene names: 15898123
Gene position: 1106948-1106211 (Counterclockwise)
Preceding gene: 15898124
Following gene: 15898121
Centisome position: 36.99
GC content: 35.5
Gene sequence:
>738_bases ATGGACAATAATGAGATTATCGTAAAAGTTCAAAATGTTTGGATAAAGTATCCCATGGGTAGAGTTGGATTATTTAGGAA ACTTTACGTACATGCAGTTAACGACGTTTCTCTCGAGATTAAGAAAGGAGAAATATTTGGTTTAATAGGCGAATCAGGCT CTGGGAAGACCACGTTAGGAAAGGGAATTTTGAGACTTATCGAGACTTACTCTGGAAGTATATACTGGAAAGTTGATGGT GGTAAGTTAGTGGATATAACAAAATTAAATGATAACACTTTAAGGAGGCTAAGAAAAGATTTTCAGATAATTCAACAAGA TCCGTATGGTGCTTTAGATCCTAGAATGAGCGTATATGAAATTTTGGCTGAGGGGCTAAGATTACACAAACTCATATCGA ATAAAAGTGAGGAAGTTGAGCAAATATATAAAATACTATCAATAGTGAAGTTAACCCCCCCTGAGAATTTTGCAAATAAG AAGCCAATGGAGTTATCTGGAGGACAGAGACAAAGAGTTGTAGTAGCTAGGGCTTTATTATTAAGGCCCAAGTTTATTGT TGCTGATGAACCAATTTCAATGTTAGATGCATCAACCAGGGGTCAGATTTTGGAATTTATATTAAACGATAGGGATCAAA GGGGAACGGCGTATTTGTTTATAACACATGATATCTCAATAGCTAGTTACGTTTCAGATAGAATAGGCAGTGGTGTTTCA CCAAATTATTTCATTTGA
Upstream 100 bases:
>100_bases AGATGTTCGATAGCTAAAGATATATGTAAGGTTGAAAAACCAAAATTAAGATATGTGGATGGAAGGTACGTGGCTTGTCA TCTTGTAGGAGGGGAAGAAA
Downstream 100 bases:
>100_bases AAGATATAATATTAGTCCTTTCAAAAAGAGATTGATATAGAGAAAAACAATAAAATTATTATGAAACATAACATGTTAAA ATAATTTGCAAAAAATATAG
Product: oligo/dipeptide transport, ATP binding protein. amino-end fragment. (dppF-2)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MDNNEIIVKVQNVWIKYPMGRVGLFRKLYVHAVNDVSLEIKKGEIFGLIGESGSGKTTLGKGILRLIETYSGSIYWKVDG GKLVDITKLNDNTLRRLRKDFQIIQQDPYGALDPRMSVYEILAEGLRLHKLISNKSEEVEQIYKILSIVKLTPPENFANK KPMELSGGQRQRVVVARALLLRPKFIVADEPISMLDASTRGQILEFILNDRDQRGTAYLFITHDISIASYVSDRIGSGVS PNYFI
Sequences:
>Translated_245_residues MDNNEIIVKVQNVWIKYPMGRVGLFRKLYVHAVNDVSLEIKKGEIFGLIGESGSGKTTLGKGILRLIETYSGSIYWKVDG GKLVDITKLNDNTLRRLRKDFQIIQQDPYGALDPRMSVYEILAEGLRLHKLISNKSEEVEQIYKILSIVKLTPPENFANK KPMELSGGQRQRVVVARALLLRPKFIVADEPISMLDASTRGQILEFILNDRDQRGTAYLFITHDISIASYVSDRIGSGVS PNYFI >Mature_245_residues MDNNEIIVKVQNVWIKYPMGRVGLFRKLYVHAVNDVSLEIKKGEIFGLIGESGSGKTTLGKGILRLIETYSGSIYWKVDG GKLVDITKLNDNTLRRLRKDFQIIQQDPYGALDPRMSVYEILAEGLRLHKLISNKSEEVEQIYKILSIVKLTPPENFANK KPMELSGGQRQRVVVARALLLRPKFIVADEPISMLDASTRGQILEFILNDRDQRGTAYLFITHDISIASYVSDRIGSGVS PNYFI
Specific function: Part of the binding-protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system [H]
COG id: COG4608
COG function: function code E; ABC-type oligopeptide transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI171184400, Length=236, Percent_Identity=31.3559322033898, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI9961250, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI9961252, Length=199, Percent_Identity=28.643216080402, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI4505771, Length=199, Percent_Identity=28.643216080402, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI42741659, Length=196, Percent_Identity=30.1020408163265, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI148612844, Length=194, Percent_Identity=30.9278350515464, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI255708477, Length=194, Percent_Identity=30.9278350515464, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI42490749, Length=199, Percent_Identity=31.1557788944724, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI9955963, Length=201, Percent_Identity=26.865671641791, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI89111135, Length=205, Percent_Identity=30.2439024390244, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI145693107, Length=236, Percent_Identity=41.5254237288136, Blast_Score=179, Evalue=1e-46, Organism=Escherichia coli, GI1788506, Length=231, Percent_Identity=36.3636363636364, Blast_Score=157, Evalue=6e-40, Organism=Escherichia coli, GI1787500, Length=204, Percent_Identity=37.7450980392157, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1789962, Length=220, Percent_Identity=34.5454545454545, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1789891, Length=203, Percent_Identity=37.4384236453202, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI48994883, Length=211, Percent_Identity=36.9668246445498, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1787758, Length=234, Percent_Identity=30.7692307692308, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1787759, Length=211, Percent_Identity=35.5450236966825, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1787547, Length=233, Percent_Identity=33.9055793991416, Blast_Score=127, Evalue=7e-31, Organism=Escherichia coli, GI1789963, Length=219, Percent_Identity=31.9634703196347, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI87081791, Length=206, Percent_Identity=37.378640776699, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI1789032, Length=205, Percent_Identity=38.5365853658537, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1787370, Length=224, Percent_Identity=34.375, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787712, Length=213, Percent_Identity=37.0892018779343, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1788761, Length=205, Percent_Identity=34.1463414634146, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1787029, Length=206, Percent_Identity=34.9514563106796, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI87081834, Length=232, Percent_Identity=30.1724137931034, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1786398, Length=207, Percent_Identity=34.2995169082126, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1787089, Length=208, Percent_Identity=31.25, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1788225, Length=215, Percent_Identity=34.4186046511628, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87081709, Length=204, Percent_Identity=33.8235294117647, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI48994997, Length=238, Percent_Identity=28.1512605042017, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1787548, Length=220, Percent_Identity=28.1818181818182, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1789672, Length=208, Percent_Identity=30.2884615384615, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788450, Length=204, Percent_Identity=32.843137254902, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1790467, Length=202, Percent_Identity=31.6831683168317, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1787164, Length=203, Percent_Identity=33.0049261083744, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1790162, Length=210, Percent_Identity=27.1428571428571, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI87082267, Length=205, Percent_Identity=30.2439024390244, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1786563, Length=204, Percent_Identity=31.8627450980392, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1786253, Length=207, Percent_Identity=29.4685990338164, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1789890, Length=204, Percent_Identity=25.9803921568627, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787105, Length=233, Percent_Identity=27.8969957081545, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1789873, Length=207, Percent_Identity=31.8840579710145, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1786872, Length=207, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1790534, Length=203, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789991, Length=233, Percent_Identity=27.8969957081545, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788644, Length=208, Percent_Identity=33.1730769230769, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1789593, Length=202, Percent_Identity=29.7029702970297, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1790739, Length=244, Percent_Identity=24.5901639344262, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786698, Length=227, Percent_Identity=27.7533039647577, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786345, Length=204, Percent_Identity=28.921568627451, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1786653, Length=179, Percent_Identity=28.4916201117318, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1789864, Length=212, Percent_Identity=25, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1787143, Length=231, Percent_Identity=27.7056277056277, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786803, Length=207, Percent_Identity=24.6376811594203, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1790190, Length=212, Percent_Identity=29.2452830188679, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787792, Length=238, Percent_Identity=26.890756302521, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787112, Length=201, Percent_Identity=26.3681592039801, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1786319, Length=236, Percent_Identity=25, Blast_Score=61, Evalue=6e-11, Organism=Escherichia coli, GI48995001, Length=209, Percent_Identity=27.2727272727273, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71992285, Length=200, Percent_Identity=32, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17541710, Length=226, Percent_Identity=27.8761061946903, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71996550, Length=230, Percent_Identity=30.4347826086957, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193202349, Length=243, Percent_Identity=26.7489711934156, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17567269, Length=230, Percent_Identity=28.2608695652174, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17551700, Length=195, Percent_Identity=32.3076923076923, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17551702, Length=195, Percent_Identity=32.3076923076923, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115535101, Length=230, Percent_Identity=29.1304347826087, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17567265, Length=230, Percent_Identity=29.5652173913043, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17569143, Length=196, Percent_Identity=29.5918367346939, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193211017, Length=228, Percent_Identity=25.8771929824561, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193211015, Length=228, Percent_Identity=25.8771929824561, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71996809, Length=228, Percent_Identity=25.8771929824561, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI115533608, Length=209, Percent_Identity=31.1004784688995, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17558664, Length=198, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI212646699, Length=200, Percent_Identity=29.5, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17569145, Length=201, Percent_Identity=30.3482587064677, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115534520, Length=170, Percent_Identity=31.7647058823529, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25146777, Length=234, Percent_Identity=27.3504273504274, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI32566680, Length=186, Percent_Identity=28.494623655914, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71992290, Length=194, Percent_Identity=28.8659793814433, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17565938, Length=218, Percent_Identity=26.605504587156, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17543740, Length=210, Percent_Identity=25.7142857142857, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322640, Length=207, Percent_Identity=30.9178743961353, Blast_Score=76, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6323217, Length=204, Percent_Identity=31.3725490196078, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6324985, Length=211, Percent_Identity=27.4881516587678, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6321752, Length=178, Percent_Identity=31.4606741573034, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641565, Length=234, Percent_Identity=31.1965811965812, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI23397593, Length=224, Percent_Identity=27.6785714285714, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI17136662, Length=231, Percent_Identity=24.2424242424242, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24659289, Length=214, Percent_Identity=25.2336448598131, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI85726357, Length=236, Percent_Identity=26.271186440678, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI281363262, Length=222, Percent_Identity=28.8288288288288, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24653245, Length=222, Percent_Identity=28.8288288288288, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 27686; Mature: 27686
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNEIIVKVQNVWIKYPMGRVGLFRKLYVHAVNDVSLEIKKGEIFGLIGESGSGKTTLG CCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCCCHHHH KGILRLIETYSGSIYWKVDGGKLVDITKLNDNTLRRLRKDFQIIQQDPYGALDPRMSVYE HHHHHHHHHHCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH ILAEGLRLHKLISNKSEEVEQIYKILSIVKLTPPENFANKKPMELSGGQRQRVVVARALL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LRPKFIVADEPISMLDASTRGQILEFILNDRDQRGTAYLFITHDISIASYVSDRIGSGVS HCCCEEEECCCHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCC PNYFI CCCCC >Mature Secondary Structure MDNNEIIVKVQNVWIKYPMGRVGLFRKLYVHAVNDVSLEIKKGEIFGLIGESGSGKTTLG CCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCCCHHHH KGILRLIETYSGSIYWKVDGGKLVDITKLNDNTLRRLRKDFQIIQQDPYGALDPRMSVYE HHHHHHHHHHCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH ILAEGLRLHKLISNKSEEVEQIYKILSIVKLTPPENFANKKPMELSGGQRQRVVVARALL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LRPKFIVADEPISMLDASTRGQILEFILNDRDQRGTAYLFITHDISIASYVSDRIGSGVS HCCCEEEECCCHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCC PNYFI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12397186 [H]